SelenoDB
Release 2.0
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Transcript Report for SPT00000997_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesGadus morhua (Cod)
Transcript IDSPT00000997
Transcript release2.0
External IDNone
Gene SPG00000901_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000997_2.0 # Transcript # Selenoprotein O (SelO) # Cod (Gadus morhua) # Full length # Forward
CTCTTGGATTTGGACATCAGAGTCACCCAGACAGATGCCTTCCTGCACTATGTCAGCGGT
GCTGAACTCATACCTGGTTCAATTCCCTTGGCACACCGATACGGAGGACACCAGGTAAAA
CCTATTGGCAATAGAAACACAAATTAAACATACTGCACTCAAACACATTATTCATCACTT
TTCTCAAAATGTTTTGTCTGCAACTGGATATTGTGTTAAACTATTTAATGTGAACGAGGC
CGATGACAAATTGGTTAACAATAAAGTTTCCTGAATGTGAATCTCTCCCCAGTTTGGCTA
CTGGTCTGGTCAGTTAGGAGATGGGAGAGCTCACCTGCTTGGCCAGTATACCAACAGGTG
GGTCCTGCTTCACAAGACTGAAGCCAAGACATAGTTCAATAATAACAGTCATATAATAAT
AAAAATGATTTAAAATGCATTGTTTTACAGAAAAGGTGAAATATGGGAACTACAGCTCAA
AGGCTCGGGCAAAACACCATATTCAAGGTAGTGCTGTGTTCCCGGATGGAGAGCCACGCA
CATTTATTCACCTTATGAATTTGTTTAGTCTTTGGGTCTGCGTTTACATATTTTTAAATA
TATATAAGATATCTTGTCACGGGCCCTTTGAGCATGTCCCCTGTGCCACGCATTGTTTAA
AGGACGCATTCGGCCTCTCCCCCACTCTTTACAGAGTGACAAGTGCCGCTTGGTCAGGGC
CTACTGGGCGTGATGTAATCCCTCATCGTTTCACGTTGATGCAGGGCTGGAGATGGTCGT
GCGGTGGTGCGTTCGTCCGTCAGAGAGTTCCTGTGCAGTGAAGCCATGCAGGCTCTGGGC
ATTGCCACCAGCAGAGCCGCCAGGTAGGAGGGCAGCTCTGGATCCATTACTCTGGCTGCT
GACTACCGTAATAAAGAAAATAAATCCATAATATTGTTTAGAATGATAACGCTTATTCTA
AGTCAAATGTTATTTGTACAATATATAGCAAACCGCAACTGTCAATATAGATTTCCTTTC
ATAGGAAAAAAACAATTGAAACGTATGAAAGCCATATCTTCTTGTGTTCTTGTTTCTTGG
TAGTCTGGTGGTGAGCGAGGAGTCGGTTTGGAGAGATCAGTTCTATGACGGAAACGTGAG
GAAAGAGAGAGGTACAGTTCAGGGTCCCAAAAGATTGAATTGTTTTCACTAACATGCAGA
TGCGTAGCTATCTTGAAGCAGAGGTTTGGAAGTTTCTGCTTGTTTGTCCATCGCGCTGAG
CGGTGGTTTGTATTGTGGTCTTCAGGAGCTGTAGTTCTCAGACTAGCCAGGACCTGGTTC
CGCATCGGATCCCTGGAGGTCTTGACCCGAGGTGGGGAACTAGATCTGCTCAGGTCAGGA
TTTTAGCTATCAGTAAGGTATCAACTATATTCACATTGCAAGGCTTGTAATAACTGTTTA
TTTTTTTTTTGCTTCCCTCAGGAAATTACTAAATTTCATCATTGAAAATAATTTCCCTGC
CATTGCTACAGAGGACCCAGATAAATATTTGGTGAGAATCAGACTTCAAATACCTTAGGA
TTAATATAGTAATATTAATTGTATGTACAGTCCTCTTACTATTTGATTGTATGACAACAA
TTCTGAAGCACTTCCATATGAAACGGACAAAGAAATATAACCCCCCATATTTAGATTTAC
GTTTAGGGCATTTAGCAGACGCTTTTATCAAAAGCAACTTACAACGGTTCATACACAAAT
TCATGCAACAACAGCGGAGTCCACCATGCAAGGCGACAGCCAGCTCGCCGGGAGTAGTTA
GGGTTAGGGGTCTTGCTTCGCAACAACTATTCAATTCTAACTATTACAACAAAATATTTC
CCTCATCAAAGGTATTTTATTCTACGGTTGTCAGGGAAACAGCTCACCTAATCGCCCAGT
GGATGGCTGTCGGCTTTGCACATGGTGAGTGCCTGTACCACCTGGTACTTCACAAAGTAC
TTCATCATGGAGTTCTTCATCCCTGACCTCCTGTAACACCCCGTTTGTCCACCAGGGGTC
TGCAACACAGACAACTTCAGCCTGCTCTCCATCACCATCGACTACGGACCTTTTGGCTTC
ATGGAGTCCTACGACCCGAGTAAATACAAACATTCAGGTTTCCCTAGCTGGCTCCAAAAG
GGCCTCCTGTTTACCATGTAATTTACTATCTCAGCCATCTTGTATCCGTGACCGAATTTC
TCATATATTTTTGAAAACTTTTAATCTTTAAAATGTGGTACACTGTTGTATCTAGTGAAA
TAGCTTTACACTAGAAAGGGGAAATTGCCTTAGGTGCCTTAGGTTCGCAAAGATGAGATA
AAAGAGAAAGAAACGGTTGTGACTTTTTTCTTTTAGTTTTGATAGTTAGTATAGAATACT
AATTATTAATACAATTAATAGTAATCGTTAATAGTGGTTGAATATTTCATAAGCTTAAAA
AAGTTAGGAAATTAGCCATTTAGTGTAGCACACAGCTCTAAGTACTTTCTAAAGTCGATC
TACCTCTTTCTCATTCGTTTCCTGGATTTTTTTTTCAGCCATATCATAGAATAATTTGTG
TCCACAGATTTTGTCCCCAACACCTCAGACGACGAGGGCCGCTACAGCATCGGAGCGCAG
GCTGACGTGGGTCTGTTCAACCTGGAGAAGCTTCTAGAATCCCTGCAGCCCGTCCTCACC
ACCAGCCAGCAGCAGCGGTGCGTACAACACGGTCCTCATGGTGTAACGTAAAGTAGCGCT
CTCTCATACCAGGAGATAGACCAGCCTGACCGCTCTCCTTTAAGCGTGTAAGGGTCTAAC
TAGAGGTCTGTGTGTCCCCCCAGGGCTGCAGCTGTGTTAAAGGGCTACGCTGGACTTTAC
CAGATGAGGTATGAATACATATTGTGTTGATCGCTTTCTTCTTGAGCTCTTGGTATTCCA
ACTTTAGACTGGTTATTTGTCTTATATATGTTGTTATTTGGTTTCAGATTTCACCAGCTC
TTCAAGGCCAAGCTGGGGCTACTGGGTGAGGAAGAGGAGGACGGGAATCTTATAGCCTTC
CTCCTTAAGGTAAGACTCTACCAGCAAGAAGATTAGAACGTATTGAGCAGCAGCAGAAGA
GAGAACCAGACCATGGCAGCAGCACCAGAGTGTAGTCCAGGCCAGCGTTTGTAATGTAGT
GGTATGTGTAGCCCTTCAGGTAATTTGAAGGAGGGCAGTGGGTATTTAATATNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTAAGCGTATTAAGCGTAAATATAC
GCGCAATATACGCGCAATACGCGCGTAAAATGTTGCTTATACGCGTGAAACGCGTGAAAC
GCGTAATACGCGCGTCAACCAATGGTTCCCTATGGAAAAAATGGCGATTTTATACGCGAA
GTACGCGAGATACGCGTCTGGTGTGGCCGCACCTTAAGTATAATATTAATTGTATCATTA
GTCTCTCTCTTCTCTGATTGGCTGCTTGTGTGTATATCTGCTCTCTGATTGGCTGCGTGT
ATATCTGCTCTCTGATTGGCTGCTTGTGTGTATATCTCCTCGGATTGGCTGCGAGGTAGA
TGATGGAGGACACAGGGTCAGACTTCACCATGACCTTCAGACAGCTCAGCGAGGCGTCAG
TGCAGCAGCTTCACCGCGGTGGCTTCACTCGGGTCAAGTCAAAGTGTTGCATTATTTTTG
TTAAACTTGCCAAATTGCCATTACTGTGCGAGCAGGGATTTTGATGCCTCCTCTCTCTCT
GTAGGTGACGTGGGCTCCTCATGACCTCTCATCCCACCAGCTGTTCTCTGATTGGTTGAG
GTTGTACCTGCTCAGGCTGGCCAGGTGAGCAAGACAACGTCATGTCTCTTCTCAACATTG
CATCTCTTCCTCAAACGTATTGTTTAGCTGGTCTAGATTGTACTTTCTGTGATTTGACCT
TTTGGTCTGTCTTTACAGACAGGAAGGCGATAATGACGAGGATCGACGGCACCGGATGTA
AGTTCATCAAATCACCCGATTTCAGCCCAACATATGGTTTATTTTTCAAGAAACTGCAGT
GTTTCCCATACATAGACCAATGTTTGGCGCAGCGCCACAGAATCAACACTGAGCACCACA
AATTGATTCCGCTTCATTTTTTATTTCTATTTTTTATTTTTAAGTATAAATATTGAAATA
AAAATAAATATGTGAAATGCGTTTATTGTTGAGATAAGCTACGGTGTTGGACTGGGTACC
CCCAGCCCGTTCTGCAGCAGGGGCTGGAGGGCAATACATTTCTTTCCGTTTCCAATCCGC
TTTTACTAGAGCCAATCACCAAGCTGGTTTTTCCCCCTGGCGCGCTATTGGCTGGTTTAA
CACAATGACGACAGGGAAGCGATTGTTGCGATCGTTGGTCTGATTGGTTGAAGGACTGTT
ATTATTTTATTTATATTGTAACATTATACTATTGATTTTCTTTACCAAAAAAGTTAAATA
CAAGTACCCCCCCCCTACCAATGTGCTCAACATTGGCAGGAATTCCATTTTAAAGACGCT
TAAAGAAGAGAGTAAACTCGGGTAGTATCCGCGAGTATGATTTCTCAGCATCTAATCTGA
TTGTTCAGGCTAGACCCATCATCCACTGATCATGGATTAACATGAGATACACATTTTTGC
GGCTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTGGTCGGCTTCTCGACTATTAAAGACAG
ATGTCTTCCTATCAAAGTTTTGAATCGCCAAGATTCAAGGTCACCCCTTCTAAAGTGCTT
TGAATGTATCCACAGGTGTGAACCCCAGGTACGTCCTGAGGAACTGGATGGCTGAGTCGG
CCACCAGGAAGGCAGAGACCAACGACTTTTCAGAGGTTTGTAAAACGCTTCAGAAGCTTC
TTGACCATACAGTTCGGTCTGTGATTTGAATTCATCAATATTGTTGAAAAAATAGGCATG
AATGACTACTTTAAGATGATACATTCTTATGTTTTCATGTGTTTTTTTGTATCAAGATTG
TAACAGTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAGTTT
TTACCATCTTGCATGACATGATTCTATGTAGTGTATTTTCCACTTCTGACCACCAGGTGG
TGCTGTTACATGATGTTCTGGGGAACCCCTTCATAGCGCAAGACGCTGCAGAGGAGACAG
GCTATGCAGCGCGGCCTCCGCTGTGGGGGCGGAGGTTAAAGGTCAGCTGCTCTTCC
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