SelenoDB
Release 2.0
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Transcript Report for SPT00001021_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesGadus morhua (Cod)
Transcript IDSPT00001021
Transcript release2.0
External IDNone
Gene SPG00000925_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001021_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Cod (Gadus morhua) # Full length # Reverse
TCAACAATGCACGGTCTCTGGTAGACTGAGAGACAGTCCCAGGTCTGCGGCGCCGGCAGA
CGGCTGCCAGTGACAGTCGATCAGCGCGTCGTACAACTCCTCGCTCAGCTCCATGAACTT
CCTGTTGGCCTCCCACACATCCAGCTCTGGGTTCGGATCTGCAAAAGAAATGTGACCGGG
AGAGTGGTTTGTTAGCGTTTCAATTACGTTAAAAATAATTAAAACCAGAAACCACTGCTT
GAAGAACTTCATCTTAATGCACACCTTCCACGGTATCCTCAGTCTCAGTCTCAGTTTCCT
TTAAAAAAAAGAAAAAAAAAGTTAGCATGAGCTAGCTTAACATATCAATGAAAGATGTTG
ACAACAATTTTCCCACTGTCAGAAGGTCATTCTGAAGGTACCTGAGGTTGTGCTGCAGTC
TGTGGGTAATACTGATTGTAATTGTATCCGTAGCCGTCCGCGTTGGGGTCATAGCCCCAG
TTGGGGTAATAGCCGGGGTACTGGGCCTGCTGTTGGTAGGGATCGTACTGCTGGTAGTTG
GGTCTGTAGGCTGCAGAGTTCGACTGCCATGACTTGTTCTCGGGAGGATGTCTGGTCCTG
GAGAGGTGGGTCACAACCAGGGACAAAATTGTTGAGTTGTACTTAAAGGGGGAACAGTCG
CGCTTGCCATTTACTCACAGCCCTTTCACACATGCATTGTAAGTCCGACATTCTCCAGAT
TACGCCCGTAGGGGCTGTATGTGTGAACGGCTGAACGAAGATGTCTGAATCCTCCAGAGT
TTACCCGGCCAGGCCCTCGGGGGAAGTCTGGAGGACCTATGAGCCGTAGAATTCCCAACG
AGCGAGTGGGCACGTTGCTGACATGTTGACGACCTTTCGATCATTCAACAGGCGCGAAAA
ATGGGAGCACAGAGTTTAGCTGCTGGTTACTTTTCTCTTCTCGCCTGTATTTTCGTTGCA
ACTTCTTTCTCCTCTTCTGTTGTCTTTCTTTTGACAAACGTACTTATTGCAAGTCGCTTT
GGATAAAAGAGTCTTCTAAAAAGGCACTAAATCATAATGTTTGTGGCAGATGATTCTTAA
ATAAGCAGTATTTACATCATTAATCACTTCATTAAGAGTCAGCACTACGTAGTTGGATCC
TCTCGCCCTCTTCGCTGTGTTGTAAACAAAACAGACTTCCGCTGCATACTTCCTTTGACA
CATCCCGCCTGCTACACGCTCTACCCAGGCACCTGCCCTCACCCAAAGTATACTGAGTAT
CTCCAATACGTGTGAACACGTCTGATGCAGCTTATGGCCAGCTGTGTGTCGCATGTGTGA
AAGGGAAACTCTGGATCACCTCTAGACCCGGCTCTCTGGAAAGGATCCCTAGTGCATGTA
TGAAAGTCATCCTATAAAAGGGATACTGCTTAACTTTGCCTTTATTTTCTATCCATTTTA
CACATCTTTTGCAGATGTTTTCTTTGATTTATCTATTATTTTATTTTATTGTATGACAAT
GTTTATATGTGAAGCTCTTCAAGTCTGCCTTGTGTATGAAAAGTGCTATAAAATTAAAGT
TGCCTTGCCTTCATATGGGATGAGTGACCTGAGAATAACATCAACTCTGTTGGACCATTG
ACCTCATCGGTCCGGCATTTGCGTTCTCAAGCATGCAAGTAAATCTGAACCGATTATTTT
ACAACAGGGATATGAAGACATACACTTGTATTTTAAAATATGGGATGTTCCCCCTTTAAA
CCTGCAGCACTCAGTGCATTGACAGCGTTTAGTTGAACATCATTGTCCGTGGAGTTCGTC
AGCCCACTGTTGACCAGGTTGTATTCATAGTCGCAGGATGTAGAATTATAAATCAAATCA
TAACCACCCAAAGCATCATGATCATAAATTAACAGAATCCTGCCCATACCAATATAATAC
ACCGGAGAGCGCTGTATCCACTAGGCCCCAACAAATGTCGCCAACTATGTTAATACAAAT
CTGAAATCAGCCTATATACTCAGTCTTGAAAATAAAATAAAAAAAATTATCTGGTCTGAA
TGCCCTCAGCGATTGAGTAGTTCTTACTTCCTCACAGGCCACGCCGGTGGACATTAATTG
GCCACCAGCTTGGCTACAAAGCCAGGAGGGAACACAAGACTGCACCCACTGAATCAACCT
GAAGTTACAGAAAGGAAGCGATGGACTGGAATTCTCTGAGACTTCAATAGATTTGACCAA
CCGTCATTTTCTGACGCCTTATGCACACCTTGATTATCCTTGCTAAAATAATCAGAAATA
GGGGGTGGATTTCTGCAGTCCACCCCTTTAAAGGCCTGGGCTCTGTTAGGAGTGGAGGTT
CCTACTTGTTTGCGGCGAGGCTGAGGCGGAGCGGCTTGCCCCCGAGACCCACGGCGCCCT
GGCACTCGTCCAGCGCCCTCTTCTGCAGCCGCTCGTCTGGGAACTGGACGAAGCCACACC
CCCTGGAAACACCAAGCAGAACAGAGACATCACAACCTTTAACGTTCAAGCATCAACATA
ACAACAGGAGAGGTTTATTTAGAGACGGCCCAAAATGACCACATAACGCAACACCAAACC
ATGGAAAAAGAGACACGCAAAATCGTTAGGCTGAGGGTCGTGTTCAGTTCAGTGGCGGCG
CTTGCTGGTGCTATAGCACCAGCAGAAATTACAATAGCAGCACCACAGCACCACCAAGAA
ATTAACTGAAATTTGACATACAAATCGTCTCATTTCTCTGTATAGTTTTGAATACAGCTT
GTTCCTCCAGTTGGTCTAGTGGAACAGCGCCCCCGATTACCATAGCGCCCACGCAGCGGC
AGCAATAAAGTTATAAACTCTGTGCTGGTCTAAGGTCAGATCCACTCTACACTTCTGCTT
ATTTATTGTCAATGTCTTGCCGTTGCTCTCCTCTGTTCAGTAAGCTGATCCAAGCTCACT
TAAGGTGGTCATGTCAGATTTATAATTATATTTGGAATAGGCATCTATAGGAAGCAAGAC
CATCAAATCAAAACAATACATCTCTTCTTAAAAACATATCAATTCATTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGCAATAATTACTAT
AGCGTCAAAGGGAGAAGAGTTCATGTCACCCATCTCCAACAATCAGTCTCCCCGACTCAC
TTGGAGTTACCGGTGGTGTCCAGCACCACCTTCCCTCCGCGACAGGAAGGGTAGCGGTTG
TAGAAGAATTCGTAGAGCATGCCGTCGTCTACCTCCGGGGTCAGATCCCCAACGAACAGA
GAGAAGTTCTGACTGCAGCAGCACACAGAGAAAACAGGCAGTATGTTATCACAAACCAGG
TAAAGCAATGGTCGTCAACAGCGGATTGTTACCTTTCTACTTTAAAGTTGACTTGAGTGA
AGCAACAACGTACATGGTAGTAATGGCTCTATGGAAGAGTCTAAAGACATGGGTTCCCTG
TTGACCAGTGCCCTACTGGAAACTGGGCTTACACTTTTCGCTTTTTGATATAGATTATTT
TACTATATAGAAGGGGTGAGTTTGTAGCTAGCATTTAAAAATAGCATTATTATCCCTGTA
TTCCACTAGTGGGAAAGGCTTATTCTCAAAGAGCACTCCTGCTTTCATGGTCTGTTCTGT
AGTGGAAACACAACACATGGGTCTGCCAATATTATGCAGTGGAAAAAACATGCACACAAA
AGCACAACACTCACCTTTCGCCTTGTTTACCAAAAGTAGCTCTATTCAGCTTAAATCTCC
TGGGCTATGGACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTACGTACGTACGTACGTACGACA
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACACACACACACACACACACACACACACGTTAGTTTATCATGAGT
ATCTTCTAGTAGAAATGTGAAGTGAAAGTATGTGATTGATCTCCAGTGTGATTAAATAGT
TACCGGGTTGGCTCCTGGAAGGACTTTTCCATTGACTTTGCGTAGACATCTCTCCGCTGT
GGCTTCATCGGTCAGCTCCACAAAGCAGTAACCCAGACCCCCGCTGTGTCGAGGAACAAC
CTGGTTTCAGATCAGGACTGAATGGACTGCTTTGACATCATTTCTGCAGTTGGTGGACTA
CTCACCCGGTCATCTTGTTTCGAATTATCCTCACATTGATGACCTGTTCGCCCAGGGTGC
GGAAGGCGCTGGTGACGAATTGATCGTCCATGTAGGGCTCCAACTGAGAGGACATGGTAC
ACATGGTTCATAAACAGTCCCACACGGGAGTCCAACTCACTCTTCATTACTGACGCACAA
CTCTTCATTTATTTAAAGACCCATTGAATAAAACCAAACTTGGTAACAACTTATTTTGGA
TGAAGAGTGATCTAGGGGGTTACATAGTCGCTGTAGTTGTACTGTCGATCTCTCCTTGTC
TCCCCTCAAAACGCATGATGCACCAGGTGACGCCATTTGTTTTCTAACTCTTTAGAAGTT
TCACGCGGTAAACATACTTTATAGTTTAAAATCGATTGTTGTACTCACGTTCCCCATCCA
TAGTGTGCTCAT
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