SelenoDB
Release 2.0
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Transcript Report for SPT00001079_2.0
Identity
TranscriptSECIS binding protein 2 (SBP2)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001079
Transcript release2.0
External IDNone
Gene SPG00000983_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001079_2.0 # Transcript # SECIS binding protein 2 (SBP2) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
CAGGATGTGAAGCTATCAGCCGAAGTAGAACCGTTCATCCCGCAGAAGAAAGGAATGGAA
GGATCTCAAGTGAGCATGAGTCTTTCTGGTGAGGCCGGCGGCGGGGGAAGTGGTGGAGGC
AGCGGAGGGGTGGAAACCACGCCGATACCCAGCTACCTCATCACCTGCTACCCATTCGTC
CAGGAGAACCAACCCAACAGGTACAGTCTCTAGCTCAGAGGGAGGGGAGGGGGGTTCAAC
AAGGATATTTCAACCCTGTTTGCTGGTGAGCGAATGGAAACCGTGGTTGTAGTGCATGAT
ATTGATAGATATGTATATTTTGTGCACCAAAATGTTCCATATAAAGTTTTCCAATACTGT
CCGCTTTGGCCGAAATATAGTCATTGTTTGCTGTATTGTGGGAAGTCGGTTCTCCCAAAC
TTTGGTACCGCCCAAGAACAATCCTTTGTGTTGTTTACAACGTATTCAATGTATTATTTA
CTTTAGCAATAATGAGAAAACACTATCCAGTGTCCTTGGTGCGAGGGCTATTAGATTGTG
CAGTAGTTTAAGACTGCGTAATCATGAATGGCCAGAGCTGGTTAACTTGGAGCCACAATC
AATGTTTCCAGTGGCTCTTTCTTTGTCCCGCTGATCTGCTGTATCCTCACACACATCCGT
TCCTCTGTTTCCTTCCCGCCTATTTGAATGCAAGGAAGTGCCTGCTATAGTAGGCTGGCT
GTGAAAATGTCATCTGGATCCTTATCAACATGTCTACATAGCATGTACAAAGTACATTAA
CATGTTGCCTCTCCGCTCCTTCCCAGGCAACATCCCATGTACAATGGAGGGGAGCTGCGC
TGGCAGCAGCCTAACCCCAGCCCCGGTGGTTCATACCTGGCCTACCCCATCTTGTCTTCC
CCCCAGCCTCCTGTCTCCAACGACTACGCCTACTACCAGATCATGCCGGCTCCGTGCCCA
CCGGTGATGGGCTTCTACCAGCCCTTCCCTGGCCCCTACGCTGGGCCCGTGCAAGCCGGA
GTGGTCAACCCCGTCTCCGCAGAAGTCGGTGAAAGGCCGCTGCCTTTGGGGCCAGCGTAC
GGGATGAACAGTCAGAGGGGTAGAGGCATGGTGCGACCTAATGTTCCCCCAAATGTACAG
AAGGTCAGTAACCTGATTGTGAGGCTTGTCGCGTTGATGTTGCGCGGTATTTGTGCCGCG
AAAAAGTGTCCGTCCTCATCCTTGATCTATTTAGTGAGCGTGCCCCGGCCCTTTCTCCTA
CAGCAGCAGTTGGGTGTGTGCCAACCTCTAAGGGGTCGCCGACCTCCAACCAGGAGTGTA
GCTGTCCAGAAGGAGGTCTGCACTTTGGGGCCTGATGGTAGAACCAAGACAGTCATGCTG
GTGGATGCGGCACAGCAGACCGGTAAGCTCCAACTGTGTTCTACCATGACTGTCCACACA
GTTTCAGATGAGAAGCTGATATGGGGAACAATCCTACGTACTTCTCACAGGTGCAGTAGT
TCTCACTGGACCCAACACCAGATCTTTTATTAAGTAATGAGAATAGAACACATGTAGGAC
AACTTGGACGACATGCAAGCAGTCGTTTTGCAACAAATGAAGACACTTCATATTTTCTCA
AACATTCCAGACTTTGCTCAGGTTGTGTGCCTCGCCCCGTGACCGAGTCGCTTTCCTGTC
AGAGAGAAAGCGGGACACAATGCCAGTCAGTCCTGTGGCCGGTCCCACTGGTTGTTAATG
TTGACGACTTCCGAACGAGTCGGAATGCAGAGCTGCTAGTTGGAAAGGTTAAACCGTGTG
CCGCTCATGATGTCTGCAGCGATGTCGCCATTTCTAAGAAAGCTAATGATTAACTCAAAT
AGCTTCATACTAAGAACACCGTCCAAGTTTCCACTGATTCATCTAGTCGACTAAATGTTT
GTGTCAACACTGGTATGTTTTGTAAGTCGCTTTGGATAAAGGCGTCGGCTAAATGTAATG
TAACCTGTTAATAATTACAGCCGTTTCCACTTTGTAACACGTTAACTCGGCTTCTCCTCC
TTGGTCCTCAGATTTCCCAGGTGAGGTGTCAGGGAGGTGCGCAGCGGAGCGGGCCAGTCC
CCAGCTGTGGAAGAACAAGACAAAGAGAAGACGGGCGTCCCATCCGGCCGAAAACTACAG
CGAGCAAGGCGCCAGTGAGGCGGACATAGACAGCGACAGCGGCTACTGCAGCCCCAAACA
CAACCAGGCTGCGGGTGTAACGCAACGAAGCGCCGAAAACACTGCAGCGCCCACAGTAAG
TTGGCCGCTCACCCTAAAAATGTGTTTTCCTGCGATGCGTAAATACGTGCATTTGTAACG
GGAGGTAGGTTATTTTTCTGAAAATGGTCTTTGCTGAACTTCCACATCTCGTTTCACACT
GTGTTGGGAACGTTGAATCACTGTCATTAAAATGCTGATGTTAATATCATTGGATTAGCT
TTTCTTTTTTACGGCACTGGTAGAGATCTGGTTTACTGCGTACCACAATAAAACAACAGA
GACATGTCGCAACATAAAGGGCTCAACTCGCAAAGCGGCAAATGCACCGAGCAAATCCCA
ACGGTGTAACATGGTCCTTTAAATCAACCTGCCCTCGGTGTTTGTGCACATTTAACGTAC
ACTTGATATCTAAACGTTTTTTTTTTTTTTTTCTCCGTACAGGCAGTAGAGACTGGCGTA
ATGACAGGTAAGCTTCACAGTGGTGAATGTTGTGCTGTCATTAGTCATATTTCTCATGCA
GCCTATTACAAAGGAGTTTTTCACCAGCAGGCACCTGGGTAAATGTGGCCTCTCAGGCGA
CCCAGTCATGGGGGGACAGAAACGGGCACTTTCACAGAGCAGACCAGAGGAAGAACTCTG
AACAGAGAAACTTCTCCCAGGTACAGTAGATCTCACCGCAGCAGACTCTAAAACCTTTAA
GAGAAAAATAAAAAATATTACCAACAATACAGATGCAGATTCACTGGTATTAGTTTCCAA
TCATGTTTCCTTCACTTGACTGTCTTTTAAAATGTGAATAATGGACATCCCAGTTTCTTA
AAGTCCAAGGTGACGTCCTGAAATGTGTCATTGCTGACATGTTCAGTTTAAGAACTATAG
TAAGCAAGAAATCTCCATATTTTCCCACTGTGTTACCCGGTTTTACCTGTGTTCTCTGCC
TTCCAGGAGTTCCACACTGGCTATGCAGGGCGCGGGCCTCCCGGCCTGTCGCACCAACGG
CCGCAGCCAGCTGTGGTCTCTGGTACCCAGGTCTCCCCGCACCCCCTCTACTTTGAGGTG
AGAGGGGCTTTCTGACGCCATCACACCCCTCGTAGATCTAAATTTCGGAAGTTCATTCGT
TGTGCTAAAATGTTTTCTACGCTCGCGTCAGGATGAAGATGAGTTCCCAGATCTGGCTAG
CGGAGGAGCTGCCCAACGCTGCACCAAAGCAGAATCTACTTCAGCCCAGACGCACGCGCA
ACCTAAACTTCCTAAAAACCTGGTACGGGAATGTGCTGTCTGGTTGGTGCTGTCTATGAG
GGTGCTCACTGAATGGGGATACAATATTAATACTTGTACAAAACCGTGATGGCACTGCAC
TTTCATGTTATGAATCACAAAATGATGTTTCCTGACCAAAGTCAAGACCCCTCCCCCTTC
TCTCTCTCTACTCCTCCTTATTCGCACCACATAACCCAGAGAGCAGGTTTTTTTCATATT
TTATTCCTTTCTTCCTCTTTTTGGTTAATTATTATCAGCTGACCACATTTCCGCCTTTCT
CCAAAAGAAATCTCCCGAACCCAACCCCCAAACAACCAACTTTATGCATCACAGCACCTA
AACTGTCAGGAATAGGACAGAAGTCCAAGCACTGTATGTGGGTCGGGTCAACCGGTGCAT
CACTAAAATCTACAGACTCTCCACCTGAATGGACACCATTGCGGAATTTGTTTACTGTTC
CACCATGGAAACGTTTATGACATCAAACATCAGTTCCGCTTCCTATTTTCTCTGCGTCAA
ACGACACATAGCTGAGTAGCAGCTTTGCTTTGAACCAGGAGCTGCGTTACTTTAACGTCA
GCGTCCAGCCTGGCGTGTGGTTCTCTGGATGATGCAGCGTTGTAGAAAATGACATTCTAT
AGATCCATGACTATGCGATGTGGAAACATTAGAAACGTATAGGAGAGGCACAGGTTTCAT
TCAACGAGTCACACATGGGAAGGAGCAGCAGTCGGCGACGTCTTTTTATTCAATGGGCCG
TTTTTGAAATTTACTCATTCACTGCACGTAAAACATTATATTGAACTATGACGCTACATC
AAAATTGAAATCTCAAATGGATCCCCTATTTTATTGCACCTATAGAGGAAGCTTGTTTCA
TAACCAGGTTCATATGAAAAGGCTTCTGTCTTTATGAAAATATCCACATTAAATTATGCT
ATTCAGTGAAAAGAGTAGTAACCAATCAGAGTTCAGGTAGGGCGAGTCTTCAGACCTCTA
ACAAAATACCTTCCACATTGAAGGGATTTTTTTGAGCAAACATGGATATTTGCTCGATTT
GTGTCCGATCTATTTTTGTGCATCTACGCAGCTGAAATATCTGACTCTAGTACCTTTCTT
CCCTTACTAAATACTCATTTGTGTTTCTACGCATTTCACAGCTGGATAACCTTCCAGAAA
ACTCCCCTATCAACATTGTGCAGACACCCATCCCCATTACCACCTCTGTTCCCAAGAGGG
CCAAGAGCCAGAGGAAGAAGGCTATGGCCGCTGCCCTGGCCACTGCACAAGAGTACTCTG
AAATCAGCATGGAACAAAAGAAATTACAAGTACGGACATTTGATGACTAACTGATGTAGG
ATCGGTTCAGATTGAGAAGTTTGAATATCATGACCTGTTTAATCAGTTCTCGTTCTCGCT
GCTGACGGGCTCGTGGCCTTCACGGTCTGGTCTTCAGCTGCATTCTGCATCGGTGTGACC
TTCGCTGCCTTTTCTTTCCGTGGCCTGCAGGAAGCATTCACCAAAGCAGCAGGGAAGAAA
AGCAAAACCTCTGTCGAGTTGGACCTGGGAGATATGCTGGCCGCTTTGGAGAAACACCAG
CAGGCTATGAAGGCCAGACAGCTCAACAATACGAAGCCACTGTCATTTACAGGTATTCAT
TAGCTCAGTCAGACCTCAACAAGTAGTTTAAGCCGAACAATCATGCCTGTATCATCTTGG
GATCAAGTATGTTGTGCAGTGTTGTTGAGCATCTTTCATTCAGTGTTTATAGTTGGGGGT
TTTTCTGGGTTTTTGGCTCGTGCTGCATTCACATTCCGCTTGTATGCTAACTTTGTTGTC
CTTCTCCCCAGTTGGAACCACCGCTCCGTTCCACGGTTCAGGCTTGGTCAGCCTGCCGTC
CGCGTTGAAGGGTCACCAGCAGCCGTACTCCGTCCCACACAATTCTCTGGATTCTACCGC
GCCTCGTATCAAGAGGGGGAAGGAGAGAGAGATCCCCAAAGTAAAACGGCCCACCGCCCT
GAAGAAGGTGAAGGAGTTTGAGTTGATCTAAATATTTAGTGTCTTACCAACCTGCAAATC
TTTTGAATGATTTTTTTTTTTTAAAACCATTTTCGCTCTGTGTTTTGGTAGATCATCTTG
AAGGAGCGTGAAGGGAAGAAAGGGAAGACTAGTGTGGAACAGGAGTCTTCAGGCCAGGAG
GAGCACGCGGATGAGAGTTTACATTTTACTGATGATCTTGCACGAGAGCCCGCCTCCCAA
GAAGGTGAGGCGTAAACCATAAGTGACCACCACTCCGACGTGTACCCAATATTCACTTGC
TTTTTATCCATCACACATTTCCTAATTGTTATTTGTGCTCTGCTGTGCACCACAGAAACC
GGTCTGAGCATGCCCAGCGACGCGTCCCTTTCCCCAGCCAGTCAGAACTCTCCATACAGC
ATCACCCCGGTGTCCCAGGGTTCTCCCGCCAGCTCCGGCATCGGGAGTCCCATGGCCTCC
AACGCCATCACCAAGATCCACAGCCGGCGTTTCAGAGAGTAAGTAGAAAGCGAGGAACGG
AATAGTCAACAGGACGGAGTAGGAATCCTTTGCAATGGAAGTGGCTCCGAAATGCAGTGA
AAGCGTTGAGCAGAGCAAATACTTCTCCCACTCTGAGACCAGAGCCGTGGCACGGAGAAG
CGCGCTATGGACGTTTATCCGGGGCTCTTAAGGGCGAAACTGTACAATAATGGATTGTAG
AGTGTGGCACGGATGCCGAGCACATTGCCCCTTCTTAGCAGAGTTGTATGCCAGTGGTCA
CAAACCCAGCTTTGTCCCTCTGTGTCCTCTTTGTGGGCCTTTTGTCCCAGCCCACCCTTC
TTGAACAGATTTAGCATTTAAAGCCTCCAAAAGGTCCTCCCCTCGGCTGTGACCGCCAGG
ACGCTCGCTCCTCAGGCCACACTACGTCGATCTTCCGATAACTATTTCACCAAAGCATAA
AGCTCCTGGGAGTATGCATACAGTTTTAAAACTTAACCGACCTGCAAACATGACATCATG
ACCGCAGTAAACCCTTTGAGTCATTCCACAAAGAGCAACAAAGATGAAAGCCACACATTT
CAGTCAGACTGCTTATGGTTCTTTTTTTAATGAACTGTAAGAGAATGGTGGGAGATGCCA
TCACAATTCCTTAAATCCCAAGTTGATGCCATAAAAATGCTTGTTTAGTTGGAATAACAC
TTTTAAACTATCTACTAAGCGAACTGTTGTTTTACATGAGAGAACAGGCATATCTTTTTT
TTACAATTTTGAGTCTGAAATATAAGATGTTCTTTTGACTTTGGGTAATTCAATGAATAA
TATTTGAGCAATCAGCTATTCATAGAACTTCAAATGAACATGTTGCAGTGATATATGTGC
TAGTTACCATTAATGGTGATCATCACTGTTCGCTTGGTGGCCACCCAAAAGATAAAAACT
CAGTTTTGATCAGTAACTTCTATACTCTCGATCATTTTTTCGTTCCGCAGGTATTGTAAC
CAGGTGCTGAGTAAGGAGATCGACGAGAGCGTCACTATGCTGTTACAGGAACTGGTTCGC
TTCCAGGAGCGGATCTACCAGAAGGATCCCACCAAGGCCAAAACCAAACGTCGCCTGGTC
ATGGGTCTCCGAGAGGTCACCAAGCACATGAAGTTGAATAAGATTAAGTGTGTCCTCATA
TCTCCCAACTGTGAGAAGATCCAAGCCAAAGGTAAACAAATGTTGTAGTACCACCATTAC
ATTGGGCCATATTTCAGTGTTGCGAGGCCTTCTGTACCCGGGCAGCCTCCACGTCCCCTT
TACAACAAACCCAAACCGACACCTTTCTTTGCACGTTGTGCTCAAGTGAATAGCTGGTAT
TTTCTGTTGTTTGACTTTGTTTTCTTAAATTGTGTACAGTTGAGTCACTGTTTTGTTTTT
TTTACTACGTTGCAGGTGGTTTGGATGAGGCTCTTTACAATGTAATCGCCATGGCGCGGG
ATCAGGAGATTCCGTTTGTGTTTGCTTTGGGCCGGAAAGCTCTCGGCCGCTGCGTCAACA
AACTAGTGCCTGTTAGTGTTGTCGGCATTTTTAACTACTCTGGAGCTGAGGTAAGTCCCT
TTTCACTAAAACCCTTTTGGCAGCGAATAATCCACCCATCGATCTATCTTAACAGAGGAA
TAAATCAAATAATAATCCGTGTAATAGTTGTACAACCTCTCACTACCTCGGTTAAACCTC
CTTCAGGGTCTCTTCAACCGTCTGGTGTCTCTGACCGAAGAGGCCCGGAAGGCCTACAAG
GATATGGTGTCGGCTCTGGAGCAGGAGCAGGCCGAGGAGGCTCAAAAGAATGACAAGAAA
CTCCCGCACCACATGGGGCACTCCCGCAACCACTCGGCTGCTTCTGCCATCTCCTTCTGC
TCCATCTTCTCTGAGCCAATCTCAGAGGTCAATGAAAAGGAGTACGGTGAGCACCCTCAT
TTTCTGTCTGTTATTTAGGTTCAGTACCATAATCAGTGGTGGAGGACGTACTTAGATCCA
GTTACGGCGCATAACAAGTTTATTAATCCCTTCAGAGACCAACTGGAGGAGCATGGTGGA
GAATTCAGATGCCCTGGAGCCTGTAGAGTCTGAGCCGAGGCGTCCTGCACCCCCCACATC
AACCCCCAAAGTGGGCGAGGCCGCGGCCGCCACGCCTCCCGCCACGTCAGCCTCCACCGC
CACGCCTTCATCCACTGCTCCCCAGACAGCCAGGACGGCGCCTCCGACACTGACGCAGGG
TAACGGGGAGAGGGACGAGGTCCGGGTGGACGACCGGCTGGAGCTGGCGTCTCAGCAGAG
CACAGAGACGGGCTCTCTGGACGGGAGCTGCAGGGGCCCGCTGAACTCCTCCATCACCTC
CACCACTTCCACCCTGGTCCCCGGGATGTTGGCGGAGGAGGAGGAAGAGGAGGACTACAC
TCCCGAGCCAATCGCTGTGGAGGTGCCGACCCTCAGCAGCCGCATTGAATACTGGGTGTC
AAAGACCCTGGAAAACCTGCAGCTGGGAAAGAGCCAGGAGAGCACAGAAGAGGAGGACGA
AGACGAGGAGGAGGAAGAGGAGGAGGAAAGAGGGCACAGCGAAGAGGAGGAAGACCTTGA
TTCA
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