SelenoDB
Release 2.0
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Transcript Report for SPT00001079_2.0
Identity
TranscriptSECIS binding protein 2 (SBP2)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001079
Transcript release2.0
External IDNone
Gene SPG00000983_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001079_2.0 # Transcript # SECIS binding protein 2 (SBP2) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
TGAATCAAGGTCTTCCTCCTCTTCGCTGTGCCCTCTTTCCTCCTCCTCTTCCTCCTCCTC
GTCTTCGTCCTCCTCTTCTGTGCTCTCCTGGCTCTTTCCCAGCTGCAGGTTTTCCAGGGT
CTTTGACACCCAGTATTCAATGCGGCTGCTGAGGGTCGGCACCTCCACAGCGATTGGCTC
GGGAGTGTAGTCCTCCTCTTCCTCCTCCTCCGCCAACATCCCGGGGACCAGGGTGGAAGT
GGTGGAGGTGATGGAGGAGTTCAGCGGGCCCCTGCAGCTCCCGTCCAGAGAGCCCGTCTC
TGTGCTCTGCTGAGACGCCAGCTCCAGCCGGTCGTCCACCCGGACCTCGTCCCTCTCCCC
GTTACCCTGCGTCAGTGTCGGAGGCGCCGTCCTGGCTGTCTGGGGAGCAGTGGATGAAGG
CGTGGCGGTGGAGGCTGACGTGGCGGGAGGCGTGGCGGCCGCGGCCTCGCCCACTTTGGG
GGTTGATGTGGGGGGTGCAGGACGCCTCGGCTCAGACTCTACAGGCTCCAGGGCATCTGA
ATTCTCCACCATGCTCCTCCAGTTGGTCTCTGAAGGGATTAATAAACTTGTTATGCGCCG
TAACTGGATCTAAGTACGTCCTCCACCACTGATTATGGTACTGAACCTAAATAACAGACA
GAAAATGAGGGTGCTCACCGTACTCCTTTTCATTGACCTCTGAGATTGGCTCAGAGAAGA
TGGAGCAGAAGGAGATGGCAGAAGCAGCCGAGTGGTTGCGGGAGTGCCCCATGTGGTGCG
GGAGTTTCTTGTCATTCTTTTGAGCCTCCTCGGCCTGCTCCTGCTCCAGAGCCGACACCA
TATCCTTGTAGGCCTTCCGGGCCTCTTCGGTCAGAGACACCAGACGGTTGAAGAGACCCT
GAAGGAGGTTTAACCGAGGTAGTGAGAGGTTGTACAACTATTACACGGATTATTATTTGA
TTTATTCCTCTGTTAAGATAGATCGATGGGTGGATTATTCGCTGCCAAAAGGGTTTTAGT
GAAAAGGGACTTACCTCAGCTCCAGAGTAGTTAAAAATGCCGACAACACTAACAGGCACT
AGTTTGTTGACGCAGCGGCCGAGAGCTTTCCGGCCCAAAGCAAACACAAACGGAATCTCC
TGATCCCGCGCCATGGCGATTACATTGTAAAGAGCCTCATCCAAACCACCTGCAACGTAG
TAAAAAAAACAAAACAGTGACTCAACTGTACACAATTTAAGAAAACAAAGTCAAACAACA
GAAAATACCAGCTATTCACTTGAGCACAACGTGCAAAGAAAGGTGTCGGTTTGGGTTTGT
TGTAAAGGGGACGTGGAGGCTGCCCGGGTACAGAAGGCCTCGCAACACTGAAATATGGCC
CAATGTAATGGTGGTACTACAACATTTGTTTACCTTTGGCTTGGATCTTCTCACAGTTGG
GAGATATGAGGACACACTTAATCTTATTCAACTTCATGTGCTTGGTGACCTCTCGGAGAC
CCATGACCAGGCGACGTTTGGTTTTGGCCTTGGTGGGATCCTTCTGGTAGATCCGCTCCT
GGAAGCGAACCAGTTCCTGTAACAGCATAGTGACGCTCTCGTCGATCTCCTTACTCAGCA
CCTGGTTACAATACCTGCGGAACGAAAAAATGATCGAGAGTATAGAAGTTACTGATCAAA
ACTGAGTTTTTATCTTTTGGGTGGCCACCAAGCGAACAGTGATGATCACCATTAATGGTA
ACTAGCACATATATCACTGCAACATGTTCATTTGAAGTTCTATGAATAGCTGATTGCTCA
AATATTATTCATTGAATTACCCAAAGTCAAAAGAACATCTTATATTTCAGACTCAAAATT
GTAAAAAAAAGATATGCCTGTTCTCTCATGTAAAACAACAGTTCGCTTAGTAGATAGTTT
AAAAGTGTTATTCCAACTAAACAAGCATTTTTATGGCATCAACTTGGGATTTAAGGAATT
GTGATGGCATCTCCCACCATTCTCTTACAGTTCATTAAAAAAAGAACCATAAGCAGTCTG
ACTGAAATGTGTGGCTTTCATCTTTGTTGCTCTTTGTGGAATGACTCAAAGGGTTTACTG
CGGTCATGATGTCATGTTTGCAGGTCGGTTAAGTTTTAAAACTGTATGCATACTCCCAGG
AGCTTTATGCTTTGGTGAAATAGTTATCGGAAGATCGACGTAGTGTGGCCTGAGGAGCGA
GCGTCCTGGCGGTCACAGCCGAGGGGAGGACCTTTTGGAGGCTTTAAATGCTAAATCTGT
TCAAGAAGGGTGGGCTGGGACAAAAGGCCCACAAAGAGGACACAGAGGGACAAAGCTGGG
TTTGTGACCACTGGCATACAACTCTGCTAAGAAGGGGCAATGTGCTCGGCATCCGTGCCA
CACTCTACAATCCATTATTGTACAGTTTCGCCCTTAAGAGCCCCGGATAAACGTCCATAG
CGCGCTTCTCCGTGCCACGGCTCTGGTCTCAGAGTGGGAGAAGTATTTGCTCTGCTCAAC
GCTTTCACTGCATTTCGGAGCCACTTCCATTGCAAAGGATTCCTACTCCGTCCTGTTGAC
TATTCCGTTCCTCGCTTTCTACTTACTCTCTGAAACGCCGGCTGTGGATCTTGGTGATGG
CGTTGGAGGCCATGGGACTCCCGATGCCGGAGCTGGCGGGAGAACCCTGGGACACCGGGG
TGATGCTGTATGGAGAGTTCTGACTGGCTGGGGAAAGGGACGCGTCGCTGGGCATGCTCA
GACCGGTTTCTGTGGTGCACAGCAGAGCACAAATAACAATTAGGAAATGTGTGATGGATA
AAAAGCAAGTGAATATTGGGTACACGTCGGAGTGGTGGTCACTTATGGTTTACGCCTCAC
CTTCTTGGGAGGCGGGCTCTCGTGCAAGATCATCAGTAAAATGTAAACTCTCATCCGCGT
GCTCCTCCTGGCCTGAAGACTCCTGTTCCACACTAGTCTTCCCTTTCTTCCCTTCACGCT
CCTTCAAGATGATCTACCAAAACACAGAGCGAAAATGGTTTTAAAAAAAAAAAATCATTC
AAAAGATTTGCAGGTTGGTAAGACACTAAATATTTAGATCAACTCAAACTCCTTCACCTT
CTTCAGGGCGGTGGGCCGTTTTACTTTGGGGATCTCTCTCTCCTTCCCCCTCTTGATACG
AGGCGCGGTAGAATCCAGAGAATTGTGTGGGACGGAGTACGGCTGCTGGTGACCCTTCAA
CGCGGACGGCAGGCTGACCAAGCCTGAACCGTGGAACGGAGCGGTGGTTCCAACTGGGGA
GAAGGACAACAAAGTTAGCATACAAGCGGAATGTGAATGCAGCACGAGCCAAAAACCCAG
AAAAACCCCCAACTATAAACACTGAATGAAAGATGCTCAACAACACTGCACAACATACTT
GATCCCAAGATGATACAGGCATGATTGTTCGGCTTAAACTACTTGTTGAGGTCTGACTGA
GCTAATGAATACCTGTAAATGACAGTGGCTTCGTATTGTTGAGCTGTCTGGCCTTCATAG
CCTGCTGGTGTTTCTCCAAAGCGGCCAGCATATCTCCCAGGTCCAACTCGACAGAGGTTT
TGCTTTTCTTCCCTGCTGCTTTGGTGAATGCTTCCTGCAGGCCACGGAAAGAAAAGGCAG
CGAAGGTCACACCGATGCAGAATGCAGCTGAAGACCAGACCGTGAAGGCCACGAGCCCGT
CAGCAGCGAGAACGAGAACTGATTAAACAGGTCATGATATTCAAACTTCTCAATCTGAAC
CGATCCTACATCAGTTAGTCATCAAATGTCCGTACTTGTAATTTCTTTTGTTCCATGCTG
ATTTCAGAGTACTCTTGTGCAGTGGCCAGGGCAGCGGCCATAGCCTTCTTCCTCTGGCTC
TTGGCCCTCTTGGGAACAGAGGTGGTAATGGGGATGGGTGTCTGCACAATGTTGATAGGG
GAGTTTTCTGGAAGGTTATCCAGCTGTGAAATGCGTAGAAACACAAATGAGTATTTAGTA
AGGGAAGAAAGGTACTAGAGTCAGATATTTCAGCTGCGTAGATGCACAAAAATAGATCGG
ACACAAATCGAGCAAATATCCATGTTTGCTCAAAAAAATCCCTTCAATGTGGAAGGTATT
TTGTTAGAGGTCTGAAGACTCGCCCTACCTGAACTCTGATTGGTTACTACTCTTTTCACT
GAATAGCATAATTTAATGTGGATATTTTCATAAAGACAGAAGCCTTTTCATATGAACCTG
GTTATGAAACAAGCTTCCTCTATAGGTGCAATAAAATAGGGGATCCATTTGAGATTTCAA
TTTTGATGTAGCGTCATAGTTCAATATAATGTTTTACGTGCAGTGAATGAGTAAATTTCA
AAAACGGCCCATTGAATAAAAAGACGTCGCCGACTGCTGCTCCTTCCCATGTGTGACTCG
TTGAATGAAACCTGTGCCTCTCCTATACGTTTCTAATGTTTCCACATCGCATAGTCATGG
ATCTATAGAATGTCATTTTCTACAACGCTGCATCATCCAGAGAACCACACGCCAGGCTGG
ACGCTGACGTTAAAGTAACGCAGCTCCTGGTTCAAAGCAAAGCTGCTACTCAGCTATGTG
TCGTTTGACGCAGAGAAAATAGGAAGCGGAACTGATGTTTGATGTCATAAACGTTTCCAT
GGTGGAACAGTAAACAAATTCCGCAATGGTGTCCATTCAGGTGGAGAGTCTGTAGATTTT
AGTGATGCACCGGTTGACCCGACCCACATACAGTGCTTGGACTTCTGTCCTATTCCTGAC
AGTTTAGGTGCTGTGATGCATAAAGTTGGTTGTTTGGGGGTTGGGTTCGGGAGATTTCTT
TTGGAGAAAGGCGGAAATGTGGTCAGCTGATAATAATTAACCAAAAAGAGGAAGAAAGGA
ATAAAATATGAAAAAAACCTGCTCTCTGGGTTATGTGGTGCGAATAAGGAGGAGTAGAGA
GAGAGAAGGGGGAGGGGTCTTGACTTTGGTCAGGAAACATCATTTTGTGATTCATAACAT
GAAAGTGCAGTGCCATCACGGTTTTGTACAAGTATTAATATTGTATCCCCATTCAGTGAG
CACCCTCATAGACAGCACCAACCAGACAGCACATTCCCGTACCAGGTTTTTAGGAAGTTT
AGGTTGCGCGTGCGTCTGGGCTGAAGTAGATTCTGCTTTGGTGCAGCGTTGGGCAGCTCC
TCCGCTAGCCAGATCTGGGAACTCATCTTCATCCTGACGCGAGCGTAGAAAACATTTTAG
CACAACGAATGAACTTCCGAAATTTAGATCTACGAGGGGTGTGATGGCGTCAGAAAGCCC
CTCTCACCTCAAAGTAGAGGGGGTGCGGGGAGACCTGGGTACCAGAGACCACAGCTGGCT
GCGGCCGTTGGTGCGACAGGCCGGGAGGCCCGCGCCCTGCATAGCCAGTGTGGAACTCCT
GGAAGGCAGAGAACACAGGTAAAACCGGGTAACACAGTGGGAAAATATGGAGATTTCTTG
CTTACTATAGTTCTTAAACTGAACATGTCAGCAATGACACATTTCAGGACGTCACCTTGG
ACTTTAAGAAACTGGGATGTCCATTATTCACATTTTAAAAGACAGTCAAGTGAAGGAAAC
ATGATTGGAAACTAATACCAGTGAATCTGCATCTGTATTGTTGGTAATATTTTTTATTTT
TCTCTTAAAGGTTTTAGAGTCTGCTGCGGTGAGATCTACTGTACCTGGGAGAAGTTTCTC
TGTTCAGAGTTCTTCCTCTGGTCTGCTCTGTGAAAGTGCCCGTTTCTGTCCCCCCATGAC
TGGGTCGCCTGAGAGGCCACATTTACCCAGGTGCCTGCTGGTGAAAAACTCCTTTGTAAT
AGGCTGCATGAGAAATATGACTAATGACAGCACAACATTCACCACTGTGAAGCTTACCTG
TCATTACGCCAGTCTCTACTGCCTGTACGGAGAAAAAAAAAAAAAAAACGTTTAGATATC
AAGTGTACGTTAAATGTGCACAAACACCGAGGGCAGGTTGATTTAAAGGACCATGTTACA
CCGTTGGGATTTGCTCGGTGCATTTGCCGCTTTGCGAGTTGAGCCCTTTATGTTGCGACA
TGTCTCTGTTGTTTTATTGTGGTACGCAGTAAACCAGATCTCTACCAGTGCCGTAAAAAA
GAAAAGCTAATCCAATGATATTAACATCAGCATTTTAATGACAGTGATTCAACGTTCCCA
ACACAGTGTGAAACGAGATGTGGAAGTTCAGCAAAGACCATTTTCAGAAAAATAACCTAC
CTCCCGTTACAAATGCACGTATTTACGCATCGCAGGAAAACACATTTTTAGGGTGAGCGG
CCAACTTACTGTGGGCGCTGCAGTGTTTTCGGCGCTTCGTTGCGTTACACCCGCAGCCTG
GTTGTGTTTGGGGCTGCAGTAGCCGCTGTCGCTGTCTATGTCCGCCTCACTGGCGCCTTG
CTCGCTGTAGTTTTCGGCCGGATGGGACGCCCGTCTTCTCTTTGTCTTGTTCTTCCACAG
CTGGGGACTGGCCCGCTCCGCTGCGCACCTCCCTGACACCTCACCTGGGAAATCTGAGGA
CCAAGGAGGAGAAGCCGAGTTAACGTGTTACAAAGTGGAAACGGCTGTAATTATTAACAG
GTTACATTACATTTAGCCGACGCCTTTATCCAAAGCGACTTACAAAACATACCAGTGTTG
ACACAAACATTTAGTCGACTAGATGAATCAGTGGAAACTTGGACGGTGTTCTTAGTATGA
AGCTATTTGAGTTAATCATTAGCTTTCTTAGAAATGGCGACATCGCTGCAGACATCATGA
GCGGCACACGGTTTAACCTTTCCAACTAGCAGCTCTGCATTCCGACTCGTTCGGAAGTCG
TCAACATTAACAACCAGTGGGACCGGCCACAGGACTGACTGGCATTGTGTCCCGCTTTCT
CTCTGACAGGAAAGCGACTCGGTCACGGGGCGAGGCACACAACCTGAGCAAAGTCTGGAA
TGTTTGAGAAAATATGAAGTGTCTTCATTTGTTGCAAAACGACTGCTTGCATGTCGTCCA
AGTTGTCCTACATGTGTTCTATTCTCATTACTTAATAAAAGATCTGGTGTTGGGTCCAGT
GAGAACTACTGCACCTGTGAGAAGTACGTAGGATTGTTCCCCATATCAGCTTCTCATCTG
AAACTGTGTGGACAGTCATGGTAGAACACAGTTGGAGCTTACCGGTCTGCTGTGCCGCAT
CCACCAGCATGACTGTCTTGGTTCTACCATCAGGCCCCAAAGTGCAGACCTCCTTCTGGA
CAGCTACACTCCTGGTTGGAGGTCGGCGACCCCTTAGAGGTTGGCACACACCCAACTGCT
GCTGTAGGAGAAAGGGCCGGGGCACGCTCACTAAATAGATCAAGGATGAGGACGGACACT
TTTTCGCGGCACAAATACCGCGCAACATCAACGCGACAAGCCTCACAATCAGGTTACTGA
CCTTCTGTACATTTGGGGGAACATTAGGTCGCACCATGCCTCTACCCCTCTGACTGTTCA
TCCCGTACGCTGGCCCCAAAGGCAGCGGCCTTTCACCGACTTCTGCGGAGACGGGGTTGA
CCACTCCGGCTTGCACGGGCCCAGCGTAGGGGCCAGGGAAGGGCTGGTAGAAGCCCATCA
CCGGTGGGCACGGAGCCGGCATGATCTGGTAGTAGGCGTAGTCGTTGGAGACAGGAGGCT
GGGGGGAAGACAAGATGGGGTAGGCCAGGTATGAACCACCGGGGCTGGGGTTAGGCTGCT
GCCAGCGCAGCTCCCCTCCATTGTACATGGGATGTTGCCTGGGAAGGAGCGGAGAGGCAA
CATGTTAATGTACTTTGTACATGCTATGTAGACATGTTGATAAGGATCCAGATGACATTT
TCACAGCCAGCCTACTATAGCAGGCACTTCCTTGCATTCAAATAGGCGGGAAGGAAACAG
AGGAACGGATGTGTGTGAGGATACAGCAGATCAGCGGGACAAAGAAAGAGCCACTGGAAA
CATTGATTGTGGCTCCAAGTTAACCAGCTCTGGCCATTCATGATTACGCAGTCTTAAACT
ACTGCACAATCTAATAGCCCTCGCACCAAGGACACTGGATAGTGTTTTCTCATTATTGCT
AAAGTAAATAATACATTGAATACGTTGTAAACAACACAAAGGATTGTTCTTGGGCGGTAC
CAAAGTTTGGGAGAACCGACTTCCCACAATACAGCAAACAATGACTATATTTCGGCCAAA
GCGGACAGTATTGGAAAACTTTATATGGAACATTTTGGTGCACAAAATATACATATCTAT
CAATATCATGCACTACAACCACGGTTTCCATTCGCTCACCAGCAAACAGGGTTGAAATAT
CCTTGTTGAACCCCCCTCCCCTCCCTCTGAGCTAGAGACTGTACCTGTTGGGTTGGTTCT
CCTGGACGAATGGGTAGCAGGTGATGAGGTAGCTGGGTATCGGCGTGGTTTCCACCCCTC
CGCTGCCTCCACCACTTCCCCCGCCGCCGGCCTCACCAGAAAGACTCATGCTCACTTGAG
ATCCTTCCATTCCTTTCTTCTGCGGGATGAACGGTTCTACTTCGGCTGATAGCTTCACAT
CCTG
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