SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00001081_2.0
Identity
TranscriptSelenophosphate synthetase (SPS)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001081
Transcript release2.0
External IDNone
Gene SPG00000985_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001081_2.0 # Transcript # Selenophosphate synthetase (SPS) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
ATGTCTGTGAGGGAGTCCTTCAACCCTGAAAGCTACGAGCTGGACAAGAACTTCAGACTC
ACGCGCTTTGCTGAGCTCAAGGGTACTGGGTGCAAGGTTAGATCTCAGTATGAATATCTG
TATCAGTATGAATGCATCATTGTTTTGGCATATCTCTTCATATTACTCGATATTCCATCA
AATGTGATGTAAAAGAATGCAGCATAATGATTATGGTGTTTTTTGTCGTCTGTCACAGGT
GCCCCAGGATGTGTTACAGAAGCTGCTAGAAGCTCTACAGGAGAACCACTATCAAGAAGA
TGAACAGTTCCTGGGGGCGGTCATGCCCCGATTAGGTTATTATGACCCTAGTATAGTACT
CTAATAACAAAAAATTACAAAAGTTACAATGAGTACATATAATGTTAAAGGTGGAAGAAG
AATTTTCCTCTGTAGAGTAAACCAGTTTGGTTTTGGCATTAAATATAAAGTTTCTTCATA
AACTCTCTCTACGTAAGGGACCAAGAGATATGATGATAGGCGAATGACTGCACACTAAAA
TGAGTTAGTTTAAATCTCCTTCAAAGCCCAGCAGTCAGAATAAAACCAGAAATGCACAAA
ATATCACATATAGATCTCTTGTATTTTTGAAGGCATAGGAATGGACACCTGTGTGATCCC
CCTCAGACATGGAGGCCTTTCTCTGGTCCAGACAACAGATTACATCTATCCCATTGTGGA
TGATCCCTACATGATGGTACGGATTTTATTCTGAAATTCTTTGTATTATTTGGTTGTGCC
TTTATAATACAAGCCTTGCTGTACTTGATGGTCAGTATTTCCATTTTCTAGGGAAGAATT
GCTTGTGCCAACGTTCTAAGTGACTTGTATGCCATGGGCGTGACGGAGTGTGACAACATG
TTGATGCTTCTGGGAGTCAGCAACAAAATGTCAGAGAAGGTATGAGGCACGTCTACAGAT
GTGTTCACTTTTGGATCCTTTTTCTGGCAAACCGCTGCAAAAAAACGTGTTTGTGGTAGA
ACGCACCAGCTACCACTCTTACTAGAGTGACTTAACACAAATATATATTAACTATAATGT
TTTTATTACCTTTTTCCTTTTCTTGTTTACGAATTTTCTTGTGCTTTACAGGAGAGAGAC
AAAGTCATGCCACTGGTCATCCAGGGATTCAAGGACGCGTCAGAGGAGGCCGGCACATCT
GTAACAGGCGGACAGACAGTGCTCAACCCCTGGGTGGTCATGGGAGGAGTCGCTACGACA
GTCTGCCAGCCGAACGAATTCATCATGTATGAAGGAGTTCCACAGCGCACACGTCACCTT
CTTGTTTATCATTTTGTTGTTATCCAAAAAAAACAATCAGTTTTGATGCTTCTCAGGCCA
GACAATGCAGTGCCAGGAGACGTGTTGGTGTTGACCAAGCCGCTCGGAACACAAGTGGCC
GTTGCAGTACATCAGTGGCTGGATATTGTGAGTCCCCCTGCCGCCGCCGCTCATTTCACT
CACTCCAATCACTTTGTATCCACGCCCCTCCTTTTTTAGGATACGCACTAACGCCACTGG
CTGTGTGTGTGTTTGTTATTTCCCAGCCTGAAAAGTGGAACAAGATCAAGTTGGTGGTGA
CCCAGGAGGATGTGGAGCTGGCCTACCATGAAGCAATGATGAACATGGCTCGACTCAACA
GGACAGGTGAACCTCTTATGGAAATGTCCTAGTAGGCAGTGAGGATAACTGCCTTAAAAC
AGCTCAGCCTTTGCACCACAATCAAAGGCCTCAACCAATAACATCTTGCAGAACGAGTAA
AAATCAGTATTTTTTTTATTCCAAACCAAAATGGCAAATGTGTCACTACTTTCAACTCCC
AACAAAGGCAGTGCAGAACAGGCCTGTATTGATGAAGGGTCCCAACTGAATCAAATGATC
TGTGTGTCTATAAGGGATCGCCTTGGTAAGAGTACCAAGAAAAGGTGCTTTGATGTTTCC
TTTCTTATTTCCTTTAGTACAGGAAAGACCGGACCTTCCTTTCCCAAAGGAAACAAGATA
ATGCCGCCACACAAATCCATGTCAATGAAAACTTACAATGTGCTTATATTGAAGAGGTTT
AGTAATTATTTTCATACAGTCAAAGAAATTAAATTCCTGTTGCTGAAAATGAATAGACAG
TGACAACCATTTGTTTAAAGTGTTTTTTATTTACTTCCCACAAATCATTCTCGATAACAA
GAAGCATCAATACCAAACAAGCTATGCCTATGATAGATTATTAAATGATTAAAAAGGCCT
TCATGCTCTGCATAACTACACACAGTACCAGAACCAACGTTCCAAATGTTTGACTGGTGC
CGTATGCTGTTGGGCAGAGAGAAATGTTGAATGAGCTTCTGCTAATATAGCAAAATGTAA
TGCAAAAAGCCTTCCGCGATTGCATTGCAATATCTAAAGAAAATGTGAAACAGAAGTTGC
TGAATCTGTAAAAATATTAGTTTTTGCTTCCAGGTGGCATACATTGTCTGGCCCGCAAAG
AGTGTAAATATATCAGCACAAATCGTATAGTCAATATTTGCTCACAGCACTTGTGTACAT
CCTTAATACACCCACGGTCATGCGCGCTCTCTGTCTCCCTCTCCCGTTGTTTTCCCATGC
AGCTGCTGGCCTCATGCACACCTTCAACGCTCACGCAGCCACCGACATTACAGGGTTCGG
CATCCTAGGCCACGCTCAGACGTTGGCACGGCAACAGCGAAGCGAGGTGTCGTTTGTCAT
CCACAACCTCCCAGTGCTTGCCAAGATGGCGGCTGTGTCGAAGGCTTGTGGGAACATGTT
TGGACTGATGCACGGCACCTGCCCCGAAACATCCGGTGAGTGTGTACATGGCTCACGTCG
TGTTCTTTCTTCCTTAACCGCTGTTTAACGCATAGTTATTCTACAGTAGATGACACGTAT
GTCAAGAGAACCTCAAAGTGCCCAACATCACACCATAGTAGAACGAATTAAAATAAATAT
TCCAAGTAGGAACGAGCAAAAATGTTGTCGCAAGATTGAAATGAAAGGCTTTAAGAATAT
GGCTTGCGATAGGTTCAAGTTGTATTGAAGGTGATCTGTATCCATTTTGAAGCTATTCTT
TAAAACACGACTTGTACATGTTTTATTTTGAGGGAAAGGTTGGAGTGATTGTCCGCTTTG
GATTAAAGAAACTACTAACGATACGTCCAAGTTTAAAGGTGGAATGTAAACACGACCTAA
ACAGAGATTCACGTCCTGCGGGATATAAAGGAGGAAAAAATACAAATCCTTACAAAACTT
CATAAGGGCAGTTATAAAGATAAGAGACCCACAGGGCTGCAGCATCTAATGCCAGCTGGG
CCGTATTCCACACAACATCAATGTGATCGGTTTCAGCGTCAAAGGCAGCATTTATAACCA
GCGGTCTGACAAGGGAGCACCCGCCAGGAACCCTTCACATTAAAAACCTCCATTTAGCCC
CTTGTGACTCACCAGATCTCCCTTTCTTCACAGGAGGCCTGCTGATTTGTCTGCCTCGGG
AGCAAGCTGCCCGCTTCTGTGCAGAGATCAAATCCCCGAAATACGGTGAGGGCCACCAAG
CGTGGATCATCGGCATTGTAGAAAAAGGAAACCGCACCGCACGCATCATCGACAAACCAC
GGATCATAGAGGTGGCACCACAAGCAGCCACGCAGAACGTCAACCCGACTCCCGGTGCGA
CCTCT
Chart Advanced