SelenoDB
Release 2.0
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Transcript Report for SPT00001088_2.0
Identity
TranscriptSelenoprotein J (SelJ)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001088
Transcript release2.0
External IDNone
Gene SPG00000992_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001088_2.0 # Transcript # Selenoprotein J (SelJ) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
ATGGCTACATCTGTGGCCAACAGAGCGATAGGTGCCATTGTAGGATCAGCAGTTGCAGAT
GCAGCAGGTATCGTTTGTCAAAGTGTAGTGTTCTATTGTCTCTAATGTAGTCGGTTCAAT
GTGTTCATGTAAAAATAAAGGGGTCCTTCTTCCAGCCCCCGTTTTAATCATAGTCACTCG
TTATGTCTGTGTACAACATGTCTGTATTGGGAGCCAATCTCAGGTTGACCACGGCTGGCA
GTGTGTTTTAGTGTGGCAGGTATCTTATATATGGGGTGCAGCTGACAGAGATAATGAGGC
CTGGGTGACGGGGAGATCACAGGGTTTTTACTGCAAACTAAGACACACAGAGGGAGAAGG
GAAGCTAAAAAATACATCATTTGTGAACAATAATAAACGGGCCTCACCCAAAGAGACAAA
AGACCTGGAATCTCTTTGTTAACACGAGGAAGGAATAGGATCTCATCTTGCACCCAGCCG
AGTGGTTTACTAAAATTAGTGACTACACATCTTCATGTCCTGTTTTAACTAAAGTCTAAT
GACTCGTCTCCTACAGCGCAGCCTCTACACTGGGTGTATGACCTCCAGAAGCTGCAGGCG
ATTCTGGCTCAGCATCCGATACCTGAATTCATCTCAGAGTCGGCCAACCCTTTCTACAGG
AGGCAAACGGGTCAGCAGAGCTGCTACGGTGACCAGGCCTTTGTTCTGTTGGAGTCCCTG
TCTGAATGTGGCGGTACGCTTTGCTTCCTCATCTTATCGACCCGACAGAATTATAAATTC
TCTAAAGCAGGTGTCTCAAACTCAAATCAGCTGCGGGCTAGATGCAGCCCACTTCAACCG
AACGCGGGTCAGACTAGCGTCCGAACGGCATGGTCGACAATAACACAACTTAACACTCAC
TTTCAAAAGCAGTCATTGAACCCCACCCTGGGGGATCGGTCCGAATGAGACTACAACACT
AGTCCTCCTTTAACTCAGCGGGGGAGACCTAAGGTCATGTGACCGTGGAATTCCTTTATA
GCCAAACGTGAAGTTACGTGAATCGAAGCTGCGTAGTAATGGACGGAGACGCTCGTCGGT
GACGTCAGATGCTTCATGTGTTGTTAGTGTGAGTCGTAAAGGAAAACTTTATTAAACGAG
CGATGCTAACGGTTAGTCACATGATCACCTACGCGAAAGAGGGCAGGAAACTGAATTTCA
CCCTCCTGCTCTCTGCACCTCGGCCGACACACACGACCCGCCCCCCATGTCAGTCACATG
CATGCCACGTTCACTGGACAAGCACACAGTAGGAAACCAGAACATCATAACATGTCCCAC
ACAGCAGCTGACAGTGGGGGTTACAGTCTAAAACTTGCGGGCTGCACTAACATTACACTT
TCATATTACGGATGGGGCCACAAAATATCGTCCCGAGGGCCGCTATTGGCCCGCGGGCCG
CGAGTTTGAGACCCCTGCTCTAAAGAATAGGTTTTGCTATCAAGTTGATATTTACTGTCA
CTTGAACTCAAACTCCACCCATCCTGTATGGCTAGGTCTAAATGTTGACGACTTGACGCA
GCGGACACTAAAATTCTTTGGCCCTGGATCCGACTACGACACGCCTCTCAACAATCCTTA
CAGAGAGAAGGGAGGTAGGAAAACTATTCAGCAGAAGAGGAAAAGTTTATTACGTTGTTA
CAGAATAATTCCTTCCACTGATTACGTGTTTGTCCTTGTTTACAACAGGGCCGACACCTC
AGCTGCCCATCGAGGGACCATGGAGACATGCAAGTTTGAAGAGCTTCCTGAAGAATGTGG
ATTCAGGCAAAGAGGAGACAGGTAGATCTGAAGTCATTTTATAACATTAACTAACATGAC
ATCACTAAGGGAAACGGCTTTAACTGATGTGTTGTGTTGTCCGCAGGCTGTGAGAACGAC
TGTCAGATTGATGGGATAACCAAACTGGCTCCTATAGTGGCTTTTTATGCAGGGAAGCCT
GACATGCTGGACAAAGTTGAGCAGGCAGTCCGTGTCACCCAGAACAATGACGCATGTGTG
GCAGAGACTCTAGCAGCTGCGAGGTCAGTATGTTTTCCATTTTTACATCAATTTGCTCTA
ACTATTTTTTTAATCTGGGTTCTGACACAAATATCAAATATACAATTGTTATCGCGTAGG
TGCAAAGAACTTTACCAGGTAATCAGTACTGAGACTGAATAGCTGACTAGAACTGTCAAC
AAATATTCTAAATTGTAATATATTTGTTTGTATAAATTGTATGGTTTGGACTCATTTCCC
CAGGTTGCTGGAACATTTCATCCTGAATGGTCCAGATCCCAAAGCCGTGGACTCTGTGCT
TGACCAGCTCAGTGACCCAAACAGAAAGCAGCCCCAGGATCTGGACAAAGCCATCATCGG
TATGCGAGGCCTGCCTTTTGGTTGCTTTACTACGGCAAAGTCATGGGACAGAGTGATGTG
ATTAAAGGGTTTGCCCTACCTCATCATGTGGGAGTTAAATACGCTAAATAGTTACTTACC
TTTTTTGCTGACTGAAAGAAATGAAAGAAATAAAAATCATGTGCAACAATTTATGTTTTA
TGTATATTTCCATTTTTCAATTATGTTTTTTTTGTATTTGATTTTATTTCAGGGCACATT
TATGAGGTGAAGAAGAATCTGTCAAAGACTCCTCAGGAGCTGATCCCCGCTGTGTTTCCG
AACACATGAGGTATCCTCACAAAGCTCATTTGATCCTTTTTAATCAGAATAGGAGTATTT
AGCGTAACTTCGGCAGCTGTCACTGCTATCACTTGATTCACATCTGTAGCTGATGTTCTT
TCAGGTTTGCCTGGTGCGTTCCAAGCAGCGCTACACGGAGTCCTGACAGCCAAGCACTAC
GAGCAGGCTGTCAGAGACACCATGAGCTGTGGGGGATGTACCTGTAGCAGAGGGTCCTTT
ATTGGAGCCTGCCTCGGGGCTCAGGTATGACTGTCTGCTAATCCTACATTCATCATATTT
AATATTATACCAGCATTGTAGGTTTGATGATTTCTGAAAAGTGCTTTTGAAATTTCACAG
ATTGGATTTGAGGGAATTCCAGCTGCCTGGACATCAAAAACTTGGCTCTATGGCTCAGTG
TTGGAGCATTCCAAGAAGATAACCCAGCAACACCAATAGTTGAGGTCTTTTTCTGGTAGC
GTAATGTGCTTAAGGAGGCTGAGGACAAAATGAAACACTGTCGAGCTATCAGAGAACATT
GTATGAAGGTTCTTGTCTAAACTACTTGACGGCAGGAGCCAGATGTTGTTGTCTCTGATG
A
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