SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00001089_2.0
Identity
TranscriptSelenoprotein L (SelL)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001089
Transcript release2.0
External IDNone
Gene SPG00000993_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001089_2.0 # Transcript # Selenoprotein L (SelL) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
ATGGCCGAGGATGCGACTGTTGTGTCCGAGGAGACTTTAACGAGTGCTCTGGCTCTGATG
GTCAACTTGGGGAAGGTCCTCCTAGAGACAGCCAAGCACGAGGCGCAAGGTAGGACCGAC
CCATGTTGACAGTGAGGGAAAGTTTTATTTACCAGTTCTGTGGCCAAAAAAAGCTTTTAT
AGGGGTAGAAATGTACGCCCGCACGGTCTTCTACTCTGTATCACTAAAACATTCAACAGA
CTGTTGGTTTTATTCGCACAGGAAGTTGTATTACCAGTTCGGCGTGTTGCGTTCTTCACT
AATGGTGTAATTGCATTCAATAGCTGTGCTGCAAGGGGCATCGGTGCTGCATTCATTAGT
TACTTTGCGAATAATCGCTAACATAATATCCCGACTTTACCATTTCAAACAACACCTCAC
AGATAACGTTTTGTGTAAAGCACTAAAATATATCTCGTTGTCTTTTGTTTTCACATGTTA
CGAGTTCTTCGTAATGAACACTAAGAACTCGGGAGAAATACTCTCAACACAGGTTTTCCG
AATATCCGATGAGCACCTGAATGCACCACCGTCTGCACAAAGCTCCACTCCGAATCCCCT
TTTGTTAATATTCAGGATTCATATATTTGTTGTCATGTCTACATTTGCTGTAGTTGCTGT
AGACATGACAAGACCCACGACTGACTGCGTTGCACAGGGCAACGTGCAACGCAGTCAGTC
GTGGGTCAGTATGTGTGTGCGCGTGGGTGTAGTGGAACTGTTATCGGTTGGATTTTCTGT
TCTGGGCAGTGCAGTGTCCACACCACACTGCGACTGATGTGGAAAGGACCCTCTCCATCG
TACCTCTGTAAAAGTTGCTGTGCATGTGCAATGGTGTGTGTGCTGCACATCATCTGAAAA
CTTGATGATGCTGGTGTTATTCTGGGAGTCTACACAGGTATGTGAAGAAGGTGTACAGCA
GGGGCCTCAGTACGCAGCCCTGGGGGGTCCCTGTGCTCACAGTTCTTGTGTGTGCGGTTG
CCAACTCTGACTAATTGGGGTCTGCCTGACAGGGAGTTCAGCACCCAGTTGCAGAGGGCA
GGTGTCAGTTTGTGTGGGGTGACTGCATAGGGGTCCTTGAGGGTTGTGTGGACTGCATCA
CCAGTGGACCGCTTCTGGCGTTACACAAACTGCAGCAGGTTTACGGTGCCTTTTTAAATT
GTTCCAGTGTTTTACATCCGACCAGCCTATGTGCCAAAAAAAAGCGCAAAAAAGATTTCA
CTCCAGTTGATGTTAATTAGATTATAAATCTTTGTCCTCTCTTATCACCTACACGTTGTC
TAAGAAGCAACGTTTTTTTATTGAATTCCTTGGTTCCATACCTACTAGCAAGGCTAGAAC
GTTGAATCTAGGTGAAATAGCACATGGCACATAGTTACCCCGCAACAAAGACAAAGATAT
TTATGACCTTTTGACTATTTCATAAGCTGGCTATCACGCTGGTGATTTATTAAAGCAGAT
CAGTGGTCACTGTATTAAAGGTGTCGTAACGTAATCCCCGTCGTGCTTATCGCCAACACA
CTGAAATTTCACAAAGCAGCATGACTCAATAGCTTGGATCCTTTGTTCCTCGTGCAGAGT
CCCTGGAGAAGTTTGTCCCGTATAAGATCACCACTTTACTCGGCCTGATCACCGCCGGAG
CAGACTTCTACAGAAGGTGAGCCGCGCTCTCAACAGAATCATTTGACCACATCATGGGAT
AAAGTACAATAAAGTCAAACCACTGTTGTATTCAAAGTTAGACTATATATATATATATAT
ATATATATTATAATATAATTTTTTTAATACTGTGAAGTAATTCTGTGTTTTATTGCTGTC
GAGCAGCATTGGAGTAAAGAAAAAGACCGAAGCAGAGAAGGTTTGGCAGAGGTTTTATCA
GTAAGTGCGAACATATGATCATATCAAATGATGATAAATGACGATGATGACACCCACATA
TATATCTTATAAGTGATTATACATATTTTCGTGGCCCCTTTTTCATCCCATCCATCCCAT
TGAAATAGTGTAAAAATGTATGTTCGCCATCAAACATTATAGGGGTGAGTTATGTACGTT
TATTAAGGCGATTAAGAAACAAAGGCGCCCTCTGCATCACAGTAAGCTAAATGCACCAAT
AAGAGCTGAGAACACAAATATCATCAGATAGCCCCCACTGACACAAGACGCAGCAGGGTG
ACCCCTCATGACACACCTGCACTGTGGCGTTTGGTCTTATTCTCCATCCTATTGGTTATT
AATGTAACGCACAAGAATCGCTGTCGAAGCCTCTTCATCACAGAACTTTCCCTACTTTTT
CAGCAATGCAGCAGTGAGAGAGCTGGTGGAAGAACTTCTGACACTTGAGGTCTGTCTGCA
ACTTTTTAAGTTTCAATTTGGTTTTGGAATGTTGCTTGTTATGACTTAAATAAGACGCAG
CAGTAAAGGATCAGATTCATAGACATATTTTTCACATTGCATTCAACAAAGATCGAGTTC
CACACCAATAATCTACGCTTTGGTTTGATGTTGCTATAATAAAATTCTAAAATATAGTGT
GTATACAGGTAAAGTTCAATTAAAAGTTTTACAAATCAGCAATAAATCAACAACAAAATT
TCAACAAAACAAGAGCTGGTTTATACCCTAGTCGACTGTCCTTTAAATTATTTTGGAAAT
GTCAAAGCAACATTTTTTTTTGCATTTAAGTAGTCTCGTAACCAAGCTATTATTGACTTA
ATGTACCGGGATTTCTTTAGTTTCAACTCTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGAGAGAGCAGAGTGAATGGGACTCCTTCCTGGAGAGTGTGGACAGTCGTC
TACAGACGACAGACAGGCAGCTGTCAGGAGGAAAGATCGCAGACCACCTGAGCCCCGACA
CAGCGTTCACCGATGGACGGAGTGGAGAGTGAGTTTACACACTGCTGGTCAAAACCTCAA
CTTCAATGTTCTTTCTGCCCTTTTTTGTCAATTAAACCCCAAGTCGTGAGCCTACATTTT
AACCGTGGAGCATTCGGTATGTTTATTGAATTCGAGCTGTGTTGTCTTATCATCTTTTCA
AGGAGCGTGACTCTCGGTCGGTACCTGGGTCAGGGTCAGAAGCCGCTGCTGGTCCTCATC
CGACATTTTGGATGACTCCCGTGACGAGACCACGTGGCCGAGCTGGAGGCAAATCAGGTC
AGTTAACCTGCAATCTGAGGGTGATTATTCAATTAGTCAGATAACAACTTTGAAGTGTCT
CACGCTGCTTACTAAGCTCAGCCTGTCAGGTCAATCTTCATTTGCAGTAGCTGAATAAAC
AAACAGCGTCCCTGAAATTATTATTCATGCGTTTCTGTCCTCTAGTCTTGTGATCAAAAA
AGGCTGCTGTCAAGCTTTTCTCCAAGTTCTCCAAAAGGTCTCGCGTTACTCGCATTATGA
TTTATTGTTATCAAATTTACGATCCAGATTTGTGTGGTTCAGAGGCTTGTATTTCCCACC
TTAAAGAGCTACCGCAGACCAGCGACCAAGTCAAAGTGTCCCTGAGCAAGACACCTAACC
CCTAATTGCTCCCCGGGCAAAAATAAAAAAGCCTTGGGTTTAAAGTGTAATGTAAGTCGC
TTTGGATAAAAGCGTCAGCTAAATGACCTGTAATGTAATGTAATGCACGCAAACATGAAC
ACTGATCCACCAAAAACGTCAATGAACATTTCATCCACTTATAGAGGTTATCGCACAGCA
TCCCAAACCATGTATAATCCCGCTTCAAGGAATTGGATAGTTAATGTGAAATGGTTTCAT
CTTGCATCTCTGCAGGTTGCCCTGCAGGCTCGGTCACTGCGCGTCTTGGTGGTTTCTTTC
GGGGGTCTGGAGGGGGCTCATCTGTGGCTGGAGCAAACTGGATGCACTTTCGACATGCTG
CTGGATCCACAGAGAAAGGTCAGGGGCCTCATTTATAAACGTTGCGTACGCACAAAAGAA
GGCGTACGCCGCTCTCTATACAATAATTGGTATTTATAAAAAGCAAACTTGACGGAAAAA
TGTGCGGTCCTTCACGCAAGCTCGGACCCATGCGTACGCACAAAAACGGGTGAAATGAGA
ACCGTCGGCAGGAAACACGCACGTGTGTGAAAGTGTGTAAAACTAGACTGTTGTGTAAAA
GAAATGCCAATACTGCCTCTCATAAATAACACAAACACCCGTTTGATCGATCTGCAGCGT
AAAACAAACAAATACAAATTGACACATTTTCAAAAAGAAAAGTGAAATACGTTCTGCAAT
AACATTGGCACGTTATGCAATTCATCCACAAAACACAGCTGTTGCTTGTCAGATGCAATC
AAAAAGACGGTAATAAAATGCCATGATGCGTCACAATGCGTAATGACGCGAAATGGCTGA
TCTTGCGCTCTTAGAAGATGTGGCAAATGGAAGGATTCGCGCTGTAGTGCAGCGCACCAT
CGGTTGTTTAAGGGCAGATGGCACTGCCTCGACTGCACTGGAGGGAGGTTATTGTCTACT
CCTGAAAGGTGTGCAAAATCGTGCTGGCATGTGCTGTGTTACATAATGTGCCCCTGCAAC
TTTTTGCCACTCAAGTGCCTTTTTGGCATTAGTAATGCCCATATGTGCCCTCCAAAGAGC
ATTTTACTTGTTTCCACCTCGCCAATGATCATTTCGACTTCACTCTGAGTGAAGTTACGT
TTCTTCGTTTTCCTCTCAGTGTTTGTCATGATTTCGCAATTGATGAATATTAATTTGTGA
GCGTTCCACAGACTATATATGGGCAACTATGGGCGTGACATTTAGAAGTGATTGTGATTT
ATTAAGGGAAAACTGTGTAGGACGTGCGTGCGCATGGTTTTATAAGTCTGAATATTTCTG
TGCGTACGCACATCCTATGTTTCATCCGTACGCCACTTCTGGCGCAAATCCTACGCAAGG
TTTTATAAATGAGGCCCCCGGTCTGGACTGAATCAACTGACTAGATTTAAACGGCATAAT
TCTTTTAAACCGTTATTCACTTTTTTTTTTTATTACAGCAGGTTAAATTGAAGTCTGCAT
TTTATGATATTGTAGCTATATTTCTATTCAGTGTAGGTGGGTAAATGCACGACACTAGAG
AGAGAGACTTTAGAGAGACTTTATTATTTAGCAGCTGTTTGATCATTTGTCCTGAGAGCC
CAGGAAGATGACGCCTCCAAATTTTTCAATCTGAAAAGTCAACCACCAGATGTTAGCAGA
TGTGAGAGAGCATTCAACCAAAATGTATAAGACAGACGTTTTTCCAAATGCCACAGAACT
GCGTCATTCATAACAAAAATACCTGAATCAGCTTTCCAGAAATCTATTTTCAAACCAGAA
TGGATGTGTTTTTTCCCCTTTTTTCTCTTAATTGTGTACCTGCAGATAATATTACGCATT
CCTAACACAGTAGACGTCATCTCTGCCACAGGTATACAGGAGCTTTGGCCTTGGCTCTTC
CTACGCAAAGGTGATGAGGTTCGGCAGCATGCTGCTGTACTCAGAGTACGGAGCTGTGGA
CAGAGACTTTCCCGATTTCCCCCCATACCTGTTGGAAGATATCTACCAGGTGAGATACTT
TGGCATTGAGATGCTGATGTAAGAACCCAAATCAGTGACCTAAATCGAGGAACTATGTGC
CAAATTTTCAGATGTACTTGTGTAGGAGCTTAAAATAGCTGCCCCTACCTCAGGCCTTTT
TCAAATTGATAGAAAACATATGGTTCATAACTGCCTGATATAGATTCAACCAACAAGGAA
ATACCTGCAGTCAAATGCAGAAACCTTCAACATCTTCTTAAATCAAATGCAGCTATCGGC
CCCATTCTGTCTGGTTTCAAGGTGCAACTTAGAAATGTTAAAAACTTCATCTCCTGTCAA
ATGATTGCTTACAGTTAAAAGCAATGGAAAACTTTCTCCATTAGTTTTAGAAAATAGTAC
TTTAGGACGCAATAGACTGGCTTGTTCTGATGGATGTGATTGTTAAACTAAATGCCATTT
ACTTACATTAGAAAGATCTTCCATTCTGCACAACAAAAACCGAAAAAGAGTTGATTGATT
CCACGTAAATCTAAAACAGACACTGAACAAGCTTTGATGTGCTTTTTTCCAGATGGGAGG
GGACTTTTTGCTGGATGAAGGAGGGAAGGTCCTTCTTTCTCACCTGTCTCAAAACCCAAT
GGACAGGCCGACCGTGAAGGCCGTCCTTCAGGCAGCGGAGCCTGCAGACTGCTCTGCTGA
CTCGGCGGAGTAACACCAACGTGTGGACGGCGAGCTGTGACACTTAAGCCTGGTTTATGC
TTCTGCGTTTTCAGAGCGACGCAGACGCAAACGCAGAAGCATGCGCCAGCCTTTACTCGG
AGCTTTCCTTTTTCTGGGTTTTATTATTTTTTTACCACACCACTGACACCACAGAGGAAA
AACAGCTCTTTGACTCCCATTCATGACGTCACGTCTTGCACTCATGAACACATGAAGAAA
TGTGGCCGATGCAGAACTGTGAATCAA
Chart Advanced