SelenoDB
Release 2.0
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Transcript Report for SPT00001089_2.0
Identity
TranscriptSelenoprotein L (SelL)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001089
Transcript release2.0
External IDNone
Gene SPG00000993_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001089_2.0 # Transcript # Selenoprotein L (SelL) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
TTGATTCACAGTTCTGCATCGGCCACATTTCTTCATGTGTTCATGAGTGCAAGACGTGAC
GTCATGAATGGGAGTCAAAGAGCTGTTTTTCCTCTGTGGTGTCAGTGGTGTGGTAAAAAA
ATAATAAAACCCAGAAAAAGGAAAGCTCCGAGTAAAGGCTGGCGCATGCTTCTGCGTTTG
CGTCTGCGTCGCTCTGAAAACGCAGAAGCATAAACCAGGCTTAAGTGTCACAGCTCGCCG
TCCACACGTTGGTGTTACTCCGCCGAGTCAGCAGAGCAGTCTGCAGGCTCCGCTGCCTGA
AGGACGGCCTTCACGGTCGGCCTGTCCATTGGGTTTTGAGACAGGTGAGAAAGAAGGACC
TTCCCTCCTTCATCCAGCAAAAAGTCCCCTCCCATCTGGAAAAAAGCACATCAAAGCTTG
TTCAGTGTCTGTTTTAGATTTACGTGGAATCAATCAACTCTTTTTCGGTTTTTGTTGTGC
AGAATGGAAGATCTTTCTAATGTAAGTAAATGGCATTTAGTTTAACAATCACATCCATCA
GAACAAGCCAGTCTATTGCGTCCTAAAGTACTATTTTCTAAAACTAATGGAGAAAGTTTT
CCATTGCTTTTAACTGTAAGCAATCATTTGACAGGAGATGAAGTTTTTAACATTTCTAAG
TTGCACCTTGAAACCAGACAGAATGGGGCCGATAGCTGCATTTGATTTAAGAAGATGTTG
AAGGTTTCTGCATTTGACTGCAGGTATTTCCTTGTTGGTTGAATCTATATCAGGCAGTTA
TGAACCATATGTTTTCTATCAATTTGAAAAAGGCCTGAGGTAGGGGCAGCTATTTTAAGC
TCCTACACAAGTACATCTGAAAATTTGGCACATAGTTCCTCGATTTAGGTCACTGATTTG
GGTTCTTACATCAGCATCTCAATGCCAAAGTATCTCACCTGGTAGATATCTTCCAACAGG
TATGGGGGGAAATCGGGAAAGTCTCTGTCCACAGCTCCGTACTCTGAGTACAGCAGCATG
CTGCCGAACCTCATCACCTTTGCGTAGGAAGAGCCAAGGCCAAAGCTCCTGTATACCTGT
GGCAGAGATGACGTCTACTGTGTTAGGAATGCGTAATATTATCTGCAGGTACACAATTAA
GAGAAAAAAGGGGAAAAAACACATCCATTCTGGTTTGAAAATAGATTTCTGGAAAGCTGA
TTCAGGTATTTTTGTTATGAATGACGCAGTTCTGTGGCATTTGGAAAAACGTCTGTCTTA
TACATTTTGGTTGAATGCTCTCTCACATCTGCTAACATCTGGTGGTTGACTTTTCAGATT
GAAAAATTTGGAGGCGTCATCTTCCTGGGCTCTCAGGACAAATGATCAAACAGCTGCTAA
ATAATAAAGTCTCTCTAAAGTCTCTCTCTCTAGTGTCGTGCATTTACCCACCTACACTGA
ATAGAAATATAGCTACAATATCATAAAATGCAGACTTCAATTTAACCTGCTGTAATAAAA
AAAAAAAGTGAATAACGGTTTAAAAGAATTATGCCGTTTAAATCTAGTCAGTTGATTCAG
TCCAGACCGGGGGCCTCATTTATAAAACCTTGCGTAGGATTTGCGCCAGAAGTGGCGTAC
GGATGAAACATAGGATGTGCGTACGCACAGAAATATTCAGACTTATAAAACCATGCGCAC
GCACGTCCTACACAGTTTTCCCTTAATAAATCACAATCACTTCTAAATGTCACGCCCATA
GTTGCCCATATATAGTCTGTGGAACGCTCACAAATTAATATTCATCAATTGCGAAATCAT
GACAAACACTGAGAGGAAAACGAAGAAACGTAACTTCACTCAGAGTGAAGTCGAAATGAT
CATTGGCGAGGTGGAAACAAGTAAAATGCTCTTTGGAGGGCACATATGGGCATTACTAAT
GCCAAAAAGGCACTTGAGTGGCAAAAAGTTGCAGGGGCACATTATGTAACACAGCACATG
CCAGCACGATTTTGCACACCTTTCAGGAGTAGACAATAACCTCCCTCCAGTGCAGTCGAG
GCAGTGCCATCTGCCCTTAAACAACCGATGGTGCGCTGCACTACAGCGCGAATCCTTCCA
TTTGCCACATCTTCTAAGAGCGCAAGATCAGCCATTTCGCGTCATTACGCATTGTGACGC
ATCATGGCATTTTATTACCGTCTTTTTGATTGCATCTGACAAGCAACAGCTGTGTTTTGT
GGATGAATTGCATAACGTGCCAATGTTATTGCAGAACGTATTTCACTTTTCTTTTTGAAA
ATGTGTCAATTTGTATTTGTTTGTTTTACGCTGCAGATCGATCAAACGGGTGTTTGTGTT
ATTTATGAGAGGCAGTATTGGCATTTCTTTTACACAACAGTCTAGTTTTACACACTTTCA
CACACGTGCGTGTTTCCTGCCGACGGTTCTCATTTCACCCGTTTTTGTGCGTACGCATGG
GTCCGAGCTTGCGTGAAGGACCGCACATTTTTCCGTCAAGTTTGCTTTTTATAAATACCA
ATTATTGTATAGAGAGCGGCGTACGCCTTCTTTTGTGCGTACGCAACGTTTATAAATGAG
GCCCCTGACCTTTCTCTGTGGATCCAGCAGCATGTCGAAAGTGCATCCAGTTTGCTCCAG
CCACAGATGAGCCCCCTCCAGACCCCCGAAAGAAACCACCAAGACGCGCAGTGACCGAGC
CTGCAGGGCAACCTGCAGAGATGCAAGATGAAACCATTTCACATTAACTATCCAATTCCT
TGAAGCGGGATTATACATGGTTTGGGATGCTGTGCGATAACCTCTATAAGTGGATGAAAT
GTTCATTGACGTTTTTGGTGGATCAGTGTTCATGTTTGCGTGCATTACATTACATTACAG
GTCATTTAGCTGACGCTTTTATCCAAAGCGACTTACATTACACTTTAAACCCAAGGCTTT
TTTATTTTTGCCCGGGGAGCAATTAGGGGTTAGGTGTCTTGCTCAGGGACACTTTGACTT
GGTCGCTGGTCTGCGGTAGCTCTTTAAGGTGGGAAATACAAGCCTCTGAACCACACAAAT
CTGGATCGTAAATTTGATAACAATAAATCATAATGCGAGTAACGCGAGACCTTTTGGAGA
ACTTGGAGAAAAGCTTGACAGCAGCCTTTTTTGATCACAAGACTAGAGGACAGAAACGCA
TGAATAATAATTTCAGGGACGCTGTTTGTTTATTCAGCTACTGCAAATGAAGATTGACCT
GACAGGCTGAGCTTAGTAAGCAGCGTGAGACACTTCAAAGTTGTTATCTGACTAATTGAA
TAATCACCCTCAGATTGCAGGTTAACTGACCTGATTTGCCTCCAGCTCGGCCACGTGGTC
TCGTCACGGGAGTCATCCAAAATGTCGGATGAGGACCAGCAGCGGCTTCTGACCCTGACC
CAGGTACCGACCGAGAGTCACGCTCCTTGAAAAGATGATAAGACAACACAGCTCGAATTC
AATAAACATACCGAATGCTCCACGGTTAAAATGTAGGCTCACGACTTGGGGTTTAATTGA
CAAAAAAGGGCAGAAAGAACATTGAAGTTGAGGTTTTGACCAGCAGTGTGTAAACTCACT
CTCCACTCCGTCCATCGGTGAACGCTGTGTCGGGGCTCAGGTGGTCTGCGATCTTTCCTC
CTGACAGCTGCCTGTCTGTCGTCTGTAGACGACTGTCCACACTCTCCAGGAAGGAGTCCC
ATTCACTCTGCTCTCTCACACACACACACACACACACACACACACACACACACAAAAAGA
GTTGAAACTAAAGAAATCCCGGTACATTAAGTCAATAATAGCTTGGTTACGAGACTACTT
AAATGCAAAAAAAAATGTTGCTTTGACATTTCCAAAATAATTTAAAGGACAGTCGACTAG
GGTATAAACCAGCTCTTGTTTTGTTGAAATTTTGTTGTTGATTTATTGCTGATTTGTAAA
ACTTTTAATTGAACTTTACCTGTATACACACTATATTTTAGAATTTTATTATAGCAACAT
CAAACCAAAGCGTAGATTATTGGTGTGGAACTCGATCTTTGTTGAATGCAATGTGAAAAA
TATGTCTATGAATCTGATCCTTTACTGCTGCGTCTTATTTAAGTCATAACAAGCAACATT
CCAAAACCAAATTGAAACTTAAAAAGTTGCAGACAGACCTCAAGTGTCAGAAGTTCTTCC
ACCAGCTCTCTCACTGCTGCATTGCTGAAAAAGTAGGGAAAGTTCTGTGATGAAGAGGCT
TCGACAGCGATTCTTGTGCGTTACATTAATAACCAATAGGATGGAGAATAAGACCAAACG
CCACAGTGCAGGTGTGTCATGAGGGGTCACCCTGCTGCGTCTTGTGTCAGTGGGGGCTAT
CTGATGATATTTGTGTTCTCAGCTCTTATTGGTGCATTTAGCTTACTGTGATGCAGAGGG
CGCCTTTGTTTCTTAATCGCCTTAATAAACGTACATAACTCACCCCTATAATGTTTGATG
GCGAACATACATTTTTACACTATTTCAATGGGATGGATGGGATGAAAAAGGGGCCACGAA
AATATGTATAATCACTTATAAGATATATATGTGGGTGTCATCATCGTCATTTATCATCAT
TTGATATGATCATATGTTCGCACTTACTGATAAAACCTCTGCCAAACCTTCTCTGCTTCG
GTCTTTTTCTTTACTCCAATGCTGCTCGACAGCAATAAAACACAGAATTACTTCACAGTA
TTAAAAAAATTATATTATAATATATATATATATATATATATATAGTCTAACTTTGAATAC
AACAGTGGTTTGACTTTATTGTACTTTATCCCATGATGTGGTCAAATGATTCTGTTGAGA
GCGCGGCTCACCTTCTGTAGAAGTCTGCTCCGGCGGTGATCAGGCCGAGTAAAGTGGTGA
TCTTATACGGGACAAACTTCTCCAGGGACTCTGCACGAGGAACAAAGGATCCAAGCTATT
GAGTCATGCTGCTTTGTGAAATTTCAGTGTGTTGGCGATAAGCACGACGGGGATTACGTT
ACGACACCTTTAATACAGTGACCACTGATCTGCTTTAATAAATCACCAGCGTGATAGCCA
GCTTATGAAATAGTCAAAAGGTCATAAATATCTTTGTCTTTGTTGCGGGGTAACTATGTG
CCATGTGCTATTTCACCTAGATTCAACGTTCTAGCCTTGCTAGTAGGTATGGAACCAAGG
AATTCAATAAAAAAACGTTGCTTCTTAGACAACGTGTAGGTGATAAGAGAGGACAAAGAT
TTATAATCTAATTAACATCAACTGGAGTGAAATCTTTTTTGCGCTTTTTTTTGGCACATA
GGCTGGTCGGATGTAAAACACTGGAACAATTTAAAAAGGCACCGTAAACCTGCTGCAGTT
TGTGTAACGCCAGAAGCGGTCCACTGGTGATGCAGTCCACACAACCCTCAAGGACCCCTA
TGCAGTCACCCCACACAAACTGACACCTGCCCTCTGCAACTGGGTGCTGAACTCCCTGTC
AGGCAGACCCCAATTAGTCAGAGTTGGCAACCGCACACACAAGAACTGTGAGCACAGGGA
CCCCCCAGGGCTGCGTACTGAGGCCCCTGCTGTACACCTTCTTCACATACCTGTGTAGAC
TCCCAGAATAACACCAGCATCATCAAGTTTTCAGATGATGTGCAGCACACACACCATTGC
ACATGCACAGCAACTTTTACAGAGGTACGATGGAGAGGGTCCTTTCCACATCAGTCGCAG
TGTGGTGTGGACACTGCACTGCCCAGAACAGAAAATCCAACCGATAACAGTTCCACTACA
CCCACGCGCACACACATACTGACCCACGACTGACTGCGTTGCACGTTGCCCTGTGCAACG
CAGTCAGTCGTGGGTCTTGTCATGTCTACAGCAACTACAGCAAATGTAGACATGACAACA
AATATATGAATCCTGAATATTAACAAAAGGGGATTCGGAGTGGAGCTTTGTGCAGACGGT
GGTGCATTCAGGTGCTCATCGGATATTCGGAAAACCTGTGTTGAGAGTATTTCTCCCGAG
TTCTTAGTGTTCATTACGAAGAACTCGTAACATGTGAAAACAAAAGACAACGAGATATAT
TTTAGTGCTTTACACAAAACGTTATCTGTGAGGTGTTGTTTGAAATGGTAAAGTCGGGAT
ATTATGTTAGCGATTATTCGCAAAGTAACTAATGAATGCAGCACCGATGCCCCTTGCAGC
ACAGCTATTGAATGCAATTACACCATTAGTGAAGAACGCAACACGCCGAACTGGTAATAC
AACTTCCTGTGCGAATAAAACCAACAGTCTGTTGAATGTTTTAGTGATACAGAGTAGAAG
ACCGTGCGGGCGTACATTTCTACCCCTATAAAAGCTTTTTTTGGCCACAGAACTGGTAAA
TAAAACTTTCCCTCACTGTCAACATGGGTCGGTCCTACCTTGCGCCTCGTGCTTGGCTGT
CTCTAGGAGGACCTTCCCCAAGTTGACCATCAGAGCCAGAGCACTCGTTAAAGTCTCCTC
GGACACAACAGTCGCATCCTCGGCCAT
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