SelenoDB
Release 2.0
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Transcript Report for SPT00001090_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001090
Transcript release2.0
External IDNone
Gene SPG00000994_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001090_2.0 # Transcript # Selenoprotein M (SelM) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
CCCCCTCCTCCCCTCCTCCTCTGGCTCTCGACGTGGCAGGAGGTCGGGACGTAACGGACG
AGCTGCACACATCATCCCTGCTCCTCTTCTGAGTCGCGTGTGCTCTCCTCCAGACACCCG
CAGGAACCGGTGCCGGAGCCATGTGGCTGATCGTGGTGGCCGCGCTGCTTCAGCGCAGCT
CGGCTCACGCTGCGGAGCTGAAGAACCTGGACGGGCTGGCCAAAGCGAGAGTGGAGGTAC
GGTGACCCCCCCACACACACCTTCCATGACGCCGGGCTGCATGCGAGGCTGTTTGTATTT
ACAGTGAGGCTGTGACATATTCATTTCAGTTAGCTCGGGTTGTGTTATTAATGTGTTGCT
AAATGCGTTGCCTCACTTTTCCGTGATTTGCGCATGCGTGCGGATGAGCTCTGCAGGCTG
CAGCCCGGTTACTTATGCTCTTCAGACAACAAAATATAGATTATTTTGTCATAACGATCG
AATTGATAACAGGGATTTAGGGTGTTGCTGTAAATGACCTGGGAATGAACCGTGAGGGTG
TGGATGCGGAAGTCTGATTCCTGCACAAAAGTTTGTAAAACTCAACACCTCTCACTGCGG
GAAAGCATGCGCGGTCCCCCGGGGTGTCACCACATCACCACCCGGCCCGCGTCACCCGAG
AACCGCGCGCAATCTGCTGCTATTGTTGCCGTTGTTGGGTTAGACACACCTGCTGAAACT
CAACACCTGCGGCCCAGATTTTTCTTTTCTTTTCAAATGGGTGAGGCAGGCATCACCTAT
TTTAAATCTGGATGCATTGTGAACACTTAAATCAGGTCATATCCAAGTTTCTCTGTAGTA
TGAGAGCTGCATGTAAACATTTTGTGTACCTGATGTTGTGTTTCTTTCCAGACGTGTGGT
GGATGACAGCTGAACAGGCTCATAGAGGTGAGTTACCTGGCATGTGGTCAACAAGTGCAC
ACTGTTAAAGAGCAGATGCCGACTGAAGCCTCAGCCGCTGTTTTATGGTGTAGACATTTT
GCATCTAGAGTTTCAACTAATCCAGATCCGTAACCAAAACTATCTCTGAGTGAAAAGCAC
TAATCCACTTCCGTCTCCAGGTCAAAGCCTTTGTGGTCCAGGACATTCCTCTTTAGTATC
CTTTGCCTAAAGTACTCTGCTGTTACTTGTTCCTGTATGTCGGTTTATGAATTGCACACA
GCAAAAAGTGCACTCTGAAGTCTCTGCGGCAATCTTTAACCATCCCTCCCTCAGCCACAA
CCTGGTGATGAAACACGTTCCTGGGGCCGACCCCGAGCTTGTCCTCCTGAACCACTATTA
TGAAGAGCTGGATGTAAGTTTTTCTTTTGCAGCATATTTTATATTTGCATTGTGTGGCAA
CGGGAAATATTTAAAAGCCTCTATATGTACACTTTAAATGGGATCACAGCATACGGACAA
TTGTGATGTCAGGTATGTGATTTTTTTCATTCTCTTTGGGGGTTTAGATCTTCTACACCA
ATTATTGTCAATCTGTAAATTCTGCTTCATTTCTCTCTATCCAGAAGTGGAATTAAGACA
TTAAGCTAAAATGTATCGCTGCATTGAGCTTTTATTTCTGGCCACTTGGGGGCAGAATTT
ACACCAACCTAAACCCTCAACAGCAGACACATTCAGACTAACATCTAGCGTTCAGTCCTG
TGTGCCGGGACACTTCAGGTCGCCGACCACAGTGACCGAAAAGCGCATTTAACCTGAAAC
TTGAATTTAAGACGTGACTTCCTTCCACAGCGGCTCCCCCTGGCTGGCATGAGTCGCTCC
GAGATCAACGGGCTGCTGGGCGAATTGGGCTTCTACAAGAAGGCCAAGCCAGAGGACGAG
GTGCCGGAGGAGTTCCGCTTCTCTCCAGCCAAAGACAGCCCGTTTAAAGACGAGCGGCCC
TACAAGTCCTCCGTAGCCTCTCTCGCCACAGACAACGCCTCCTCAAAGCCCGGAGCAGAC
GCCACGCACACTGACCTGTAACCTGTCGTAGTGGTGGGGAGTGAAATTCCCACAGTACCG
CTAAGCCGATCCACGTCCAGCTGGTTAATGTACTTAATGAAAGAAATACTTGCCATTTCA
AAATAAGACTCGCATTTGAGCGTGGTCACTTTCTCCGCTTTGGCAAAAGGCCTCCAAAAG
ATCCAGTCTTAATTTGCACACATTGTTCTGTTTGATCTTAATTTAGTAGCAATAATAGCC
CAACAGTTTGCTTCGAGTGCTTTTTTTACTCTGTACACCAACTGGAAGTGTTTTATTTAG
TTTTTTGGTACATTGCGTGTCAATGTTCTTCAAATATTTGCCTTCTTGTCTTCCCCTTGT
GTGTCCGATTGCTTTCTACCTACTGGGAAACTGAATGAAGCCTCAGGCTGAAAACTGTCT
GACTGGCCTGAGGCTGATGCTACACGTTCTGGTGGGTT
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