SelenoDB
Release 2.0
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Transcript Report for SPT00001103_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001103
Transcript release2.0
External IDNone
Gene SPG00001007_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001103_2.0 # Transcript # Selenoprotein U (SelU) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
CTGTTCGGGATGGGGATGTGGTCGCTGGGTCTGGGTGCGGTCGGAGCCGCGCTTGCCGGG
ATCTTCTTGGCCAACACTGACCTTTGCCTTCCTAAAGCCGCTAGTGCGTCACTGGAGAAC
CTCGAAGACGCTGACCTGCGCTCCACCAGAGATGGTGCGTAACTTTTCTGATTCACTGGA
ATTATGTTGTATGTTTCTATACATTGCGAATGCACTGAATGAGGGATTTAAGACAAAGCT
GCTTTCTCAAATCTGCTGGTATTACAGATTAGATCCCGGTAAAGGTCTTCGTCCAAAGCT
AAAGTTATTGTGACACAGTCGGATGTGTGACCATGAACATTTCTCCTTTTCTCTCTTTGG
AGGCTACATCTTTTATCTTCCAGGCGTGAGATTACAACTTTTGTATTTCTGATAAAACCC
ATGGCATTTTTTGTGCTTTCTTTTGTCGTGCCTTGTTTTAGAAACCGCTTGTTCTTTTTT
TCTCATCAGGCGACAACGTCATTAAAGGAAGGAGCCTGTGGGACAAGAACGGGGCCGTGG
TCATGGCCGTACGACGCCCTGGATGATTTTTGTGCAGAGAGGTGACACAAAATGTTTCCC
AACAACCTCAATGTTGAGGGTGTTGCAATGTGAACAGCGTGTGTGTGTGTGTGTGTGTGA
GTGTGTGAGTGATAGCTACCCTGATGGTATCCCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTGCCGCTGCAGGAGGCCTCTGGGCTGTCCTCTCTGAAGCCCCA
GCTGGAAGAGCTCGGGGTCCCTCTGGTCGCTGTGGTGAAGGAGGATGTGGGCACAGAGAT
CCGGGACTTCCGACCGCACTTCGCCGGGGACATCTTCATAGATGAAAAGGTTAGCAGGGG
AAGATAATATACGATTCCTCCAGAGCCACTGTTACTCTTCCTCCTCGCGACCTGTACGAG
CATTACTCCTAAAATACCCTGCAGGCACATACTGCCAATGATAACCTGACCTAACAGAAA
CAGTAAGAAACAAGCTGACCAACAATTATAGACTAACAAAATTGTTGCTAATTATTTTTC
TGTTCATTGACAAACTGTTTCAGCTCTTGTGAGATTAATATTTGAGGTGTGGATCTCATA
AATAATTAATGGAGGATTCATTTGCTGCTAGCCTGCTTGTTCAATGACCAATTATCATAT
TTTATTTAATGATCCAAGAATGGGAGTAGACTAGTAATCATTAGTTATGCTGTAAAAGAG
GAAATGAGTCACGTGACTTTAAGTTGCTCCTCAGCGTTCCTGCTGTCATCTGCCAACGCT
TGACTTCAGAGTTGACAAATAAGGTTCTGGATTCATTTCAGCGGTTACGGTCAAATATAT
CGGACTGAAACTTAACTGTGCGATTTGTAGAAGAGCTTCTACGGCCCGCTGCAGAGAAAG
ATGGGCGGCCTGGGCTTCATTCGCCTCGGGGTCTGGCAGAACTTCATGCGGGCCTGGAGG
TCAGGTTACCAGGGCAACATGAACGGCGAGGGCTTCATCCTGGGCGGAGTGTTTGTCTTC
GGAGCAGGAAACCAGGCAAGCATAACTGGAATACTCGTGAAGATTTGGCTCAGCAGAGCT
TTATAAAGCTGTATTTAACCGTGTGTTGTGTTTTCAGGGGATTCTCCTGGAACACCGGGA
GAAGGAGTTTGGCGATAAAGTGCAGATCGCTGATGTTTTAGAGGCTGTTAAGAAGATTGT
ACCTGCAAAATAAGCCTCCCGCATAAAAAAAGTCTTTCAAAAAGGTTCCCTTAATTAGAT
TAAAAAATAACTGCAGTCAAAGTCCGTCCATCACTACAAACTAACATTTATGTCGTTACT
GTCTGATATCACAACATACCTCTACATTGGTTCAGTACAAAGCTGATGTAATTTCAGGAT
TTGCCAACGATTATACCTCTGCAGACACCTCGCAGCTATTGATTTTAAGACGGGTATTAA
AAAAAAAAGGTAGTAAGGGACTTATATTCAAAGGTCACTTTAAATCTGTCTTATAGAGAC
AAGACAAATTACTCTAAAGTCTCAACTCATTTGTAACAACGTTAGTATGCGTTGTCTTTG
TCCGCTTCTCGTGGTCAGGCACCCGAAGGGGCCTCCAACATGGCGGAGCAGTGTGTGTGC
GGTCTGTGTGTGTGTTAATGACAACTTGAATCCAAACTCAACATTGAGAGGAGCAGGTTT
GATGCTCAATCACATCCAGG
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