SelenoDB
Release 2.0
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Transcript Report for SPT00001175_2.0
Identity
TranscriptGlutathione peroxidase 5 (GPx5)
SpeciesIctidomys tridecemlineatus (Squirrel)
Transcript IDSPT00001175
Transcript release2.0
External IDNone
Gene SPG00001079_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001175_2.0 # Transcript # Glutathione peroxidase 5 (GPx5) # Squirrel (Ictidomys tridecemlineatus) # Full length # Reverse
CTATTTAGTGTTGAATTGCTTCAGGTACACCAGAATGTCTGACTTGACTCTGCTGATTGT
AGCACGGTGGAACCATCGCATGACAGGGACTCCATCGGGCCCCACCAAAAATTTTTCAAA
GTTCCAACGGATGTCATGAACTTTTATGGGTTCCCAGGAGATATATTTTAACGAGCCCAA
CATCTCAGATGGATGAGGACAGGAATGCTGAAGCAGAAAGATGGAAAAGAGAAACAACAC
ATCACTTTTGCTACCAGATGATCAAGGTATTTTTACTCAGAAGTAATCCACTACCTCCTG
TATCTAAATATTTTATTTCCTATGATTCTTGGTAAACCCCATAAAATTTCCAAAACACCA
CAATGTCAATTATCAGGAATGTTGTAACTATTGTAGCCAAATTCTGCTTCTTCCTTTTAT
TTTTTCCCCATAAACCCAACCCACAATCATGCCACCAGTGTTAAGATATGTCACCACTCA
AGCTTCATTTTCCTTTTCTGCAAAGTGATTGACTTGGATTAAAATGTGGATTTCCAAGCT
TTAGGGTTCAATGGGCCAATAGCATTTCAATAAATATCTTTTGGGGATAACTTAGAGTTA
ATGACATTATATCAAAGCAAAAAATGTTAAATACCATCAATTCATCATCATCATTTTAGA
AATGCCATCCTAAGAATATATGTGTCATAATCTTTATTTTTTAATATTTATTTTTTAATT
TTAGGTGGACACAATATCTTTATTTTACATTTATATGATGCTGAGGATTGAATCCAGTGC
CTCGTGCATGCTAGGTGAGCACTCTACCACTGAACCACAACCCCAGCCCCAGTCATAATC
TTTAAATAAAGGACAGCCCTGTAAGTTACGTGAGTTGAACTAATGAAATCCTCTGTACGT
ATTCTTTCTTCAGCTTACTGAGGATATACACAAATTTTAAAATGGGCTAGTCTTGGTCCA
AGTCCAGCATTTAGAAGTAATTCACTCTAGTGATATTTAGGATTCTTTTAGCTCTGGCAC
TCTCTTTGTCCAAAAACCAGTATTAACAGCATGATGGCACATGCCTATAGTCCCAGCAAT
TTGGGAGGCTAAGGAAAGAGTATCACAAGTTAGAGGCCAACCTCAGCAACTTAGCCTAGC
CCTAAGCAATTTAGTGAGACCCTGTCTCAAAATAAAAAATAAAAAAAGGGTTGGGAGATG
TGGCTCAGTGGTTAAGCACCTCTGGGGCCAATCCCCAGTACAAAACAAACAAACAAACAA
ACAAATAAATAAATAAAAACCAATGTTTCAACTAAAAATACCTACTACATTTTATTAATC
TTGTTGATTTCTAGCATATTCTCTCTCTCTCTCTCTCAACTGTGATCTCATGTTACTATT
TAGCCTGCATTATAGATAGCAGGCACTCATTAAATGTACCTTAGATGAATGAATTAATGA
ATGTCAATGAGTAAGAGGGTGGTCCCAGTAAAAGCTGCCATTCCACACAATTCTCTCCCC
CATACAAAGTCAGGGCCCCATAAACACTAACAAATTAAACCCAAATCTTATGCTGACCTG
AAGATTCCCTCTAAAAAGATCAATCCAACCTCTAGGCATGATCTCTTGGGCCCATTTCTA
CCATAACAATTCTCCACTAAGAATATTAGGGAAAAGGAGGAGGTTTAAGCCAGTAACTGA
CTCACCTTCAAGAAGGTGAAGACTTTCTGTTCTTTTTCACCATTCACATCTCCTTTCTCA
AAAAGCTGGAAATTAGGTATATATCCTCCCCCTGGACGAACATACCTGCAATAACCAAAT
GTTCTCAGGAAGCTCCAGGATAAAGTTATGATGGGACATCAGATTTGAAGTAGAATGAGG
AATAGATATAATAGATGGGAGAGGTGACAGAAATAGGCCATTTTTAGACTTTGGGCTCCT
TAGTCACTATTTTATTCCACAATCTATCTTGGCTCCCCTCATTGTTTCTGTGCCAATTAT
TCTGTTCTTCTGCTCTTCCACAGTCCACCCAGTTCTCAACCAGGGGTGGAGACAAAATCT
CTGGACACTACCAGACTCTTATCAAGGTAGACTAATGTTTAAAAAAATCAGTTTGAAGAT
ACCCTTGAGCCTAATAATCCACTACCTTTCTGGGAGGTTTCTGAGATGGAAGAATCTCTG
CAGATAGGAAAGAAGGACAAGGGTCTCCTACTGGGTTTCAGGCAGGCACTTACTTGAGTC
CAGGAAGAATCTCTGTGTTGTCTCCTGGTTCTTGCTTTCCAAACTGGTTGCAGGGAAAGC
CCAACACAACAAAGCCAAAGGGCTTTAGCTCCTCCTGAAGTTCATTCAGTTCTGTGATTA
GAAAAGGGACATGATGGTCAGCCTAGATAACCTTTGGGCAGAGAAGGATCCCTGGGGTTA
TTCATTCTTCAGAGAAGGAAACAGAGACCAGGGAGGGAAATATCTCTAGATCAAAGAGGC
TATGAGTGACACAGCTGAAGTTGGACACCAGATCTTCAGACATGCCTGCTAGACCAGTGA
ATATAGTACAGTATTTCCCAAGCCTGTAGCCACATCCCAATCATTAAAAATAAGGATGCC
CATAAGTTTCTGATTCTATTTCTCTGAGATGGGATCAAGTCATCTTAATTATTCAAACTC
CCGTGATTTTTAAACAAAGCCAGGTTGGAACATCATTATTATTCTTATCAGTTTGCTTTC
CCTGGTTGGTGAATTTACAGACTGAATCTTTCTAAAGGGAAGACACAGATGACAAGACTG
AGCTTCTTTCCTCAGTACAGGCTGGCAGAGTGCAGATCAATCTGACAGAGCCAAAGAAAA
CCAGAAAAAGTTCAAGTTAAGCTTTCTGCTGCTCTTCAACCATCCTGAGGATGTTAAAGA
TGCTTTCTACCTAAAAGTCTTCAGTGATTTGCCAAACACGAGCTTCAGCAGCTTTCTTCT
ATTGCCAGGAAGTTTCCAACTTGTCGGCTCAGGCTTTTATAATCCATGTCTCTTTATTGA
CACTTTCTGGACCAGATGCCTTCAGTCCCTTGATGAACACTAGCCAGTGCCACTCAGATT
CAGCTCACCCAATTGGTACCTCCTTTTATCCCCTTTCTTTAAAAGGAGAGACTGCTTTCC
TGTTTTCACGTGAGTCCTCAGAACCTCTCTCCATGTACTTCCCTCTTGTCTTCAGCACTA
CAGATAATCCCTCCCTCTAGGAAAGAAAAGAAAATAGGAAGCCTGTCTTCCACTCCTTGA
GCAACGATTCCTCAGTTTCTTCATCTGTTATGTGCAGAAGGAGATGAAATAAGTTCATTT
TTAAAGTCCCTTATAAATGGACAAAATTAATTATGTTTAAAAAATAATATTCAGTCTTTT
TTTTTTTTTTTTTTGGTACTAGGAAGTGAATCCAAGGGCACTTAACTACAGGGTCTCACT
GAGTTACTTAGGAACTCACTAAGTTGCTGAGGCTGACTTTGAACTCAAAATCCTCCTGCC
TCAGCCTCACAAACTGCTGGATTACAGGCATGCACCATCAGCCAGTTAATATTCAGTCTT
AAAAAAGAAAAAGGAAATAAACTAAACTCAAAATTATGTTGTTAATTTAAAAAATAAGAC
AGCAAACATATTCGCATCATGTTTTCAATTGGTAGGAAAAGCAGGAAAAATAATCCATAT
CCATATTTTATAAACATGATAATATAAGCTGTCTGAAGGGAGGAAAAGAAGGTGGAAAGG
TTTTTTTCACTGTGAACCTCTTTGTTCCTTTCGAATTTTGAGGCTTGTGAATCTATTACT
TCGGCAGAACACAACATAATTAAAAACAAATTCTTAGTAATTCAAATATATAAAGTGTAT
CTGATATAATTCATCCTGCTTACTATTCATTTGTTTTTAAGCCAATGGTCCTAAGAGACA
TATGAGAGAGACAAAATTCTTCCTTGAATAATGAACAAGGAGGAAGAAAACTACACCCAA
GAGAAGAGGCAAGATTGACAGGGTGTATGTGTTTCTATCATAGCCTCTTCTTCTGGCCCT
TAACTCCAGTCAAATACAGCTCCAGGTATAAACTCTTTCCCCCTTTCCTTGTCATTATAA
AAGACTTTGCAAAAGTCTCAAAAAACATGGATCTTTTCTTATCTATTTGCCAAGGAGACT
TCTGGAATCTTCTATGAAGCTCCTAGTTCTTAGATATGTATTGATTTTATTAGAAACTTC
AGACAAAGCAGAGGCCAAGCCTAGGAAATTGTCAGCAATTTTTTTTTCTATAAAAGCTAA
ATAGTATTTTAGGCTTTGCAGATCACATGGCCTTCATCATCACTCCTCAAACAACTACTG
AACTCTGCCTGTGGCATGAAAGCAACTTAGAGAGTAAGTATATGAACAAACATAGCTGAG
TCCAATACAACTTGGTTTCTAAAAACAGACTGGCCAGATTTGGCCTATTGGGCACAGTTT
ATTGAATTTTGACATTGAGAATAAAGTCATTTAGCTATGAGTATTTATGTTGGTATATAA
TTAGAATTAGAATATAATTCCAAATGTGGTTTTTAGAATATCAAGTGTGATTTAAAATCA
GTTGGAAAATTTAGTCCCAAAGACATATGGCTGTGAATTCTTACCAGGATATTGAGCTGT
CAGGCCACAATAGGTGGCTACGTTGACAAAGAGGATGTACTTGCCCTCATACTGCTTGAA
TTGAATGCGTTCCATCCCATTAAGAGTGAAGGCCTCATAGTTATATATGGTGCCTTTTAC
ATCTTTGTAGCAATCCATCTG
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