SelenoDB
Release 2.0
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Transcript Report for SPT00001176_2.0
Identity
TranscriptGlutathione peroxidase 6 (GPx6)
SpeciesIctidomys tridecemlineatus (Squirrel)
Transcript IDSPT00001176
Transcript release2.0
External IDNone
Gene SPG00001080_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001176_2.0 # Transcript # Glutathione peroxidase 6 (GPx6) # Squirrel (Ictidomys tridecemlineatus) # Full length # Forward
TTTCAGATGGATTGCAACAAAGGGGTGACTGGCACCATCTATGAGTATGGAGCCCTCACT
CTCAGTGGTGAGGAGTACATCCAGTTCAAAAAGTATGCTGGCAAGCATGTCCTCTTCGTC
AACGTGGCCACCTATTGAGGCTTGACAGCTCAGTATCCTGGTAAGAACTAAAGTTCAACT
CTTTGTGAACTAGTTTTGTCAGATAGCCATATTCTAATTCTTGACTGTTTTACTAATGTG
TCATTGTGGGTGGGAGATGGGATAAGTGAAGATGTGAGAGTCTATTCCCCTGAATCCTTT
TATTGCTCTGCTTCTTAGAATGCCAGAAGAAATATCTCCAGATTTGAGAATTTAGACTTT
CCCAAAGATTTGATCAAAGATTACTAGGAATAGCTGTACCCTGAACATATCTATATCCTA
AGGGGAACATATATTACAGGCAACCATTGGCCTTCTCAGAAATTATTAGATACATTGTTT
AACAAAAAGATACTCACAAAAGTACAGATTAGGGGTTTGTGAATATAGCCCTGAGTCTGA
TCCCCAGGACTGGGGATCTGAGAGAGAGAGTAAGCGTGCAGTACCTAATGTACCTAATTA
TAAGAATCCGAATGAGAGTTTAGTATCATTTAGTAAGTCTAAATTTTCTTTCTTTCAAAT
GGTTAAATTTGGAAAATATGGTAAATATAAAAATTCATAATGCGTGAATGGTGGATGCAT
GGGACATGAACCTGCTTTTAAAACTGCTTTCATTTAGTTCTGTTTTTTTTCTTTCTTTCT
TTCTTGTTTCTTTTCTTTCTCTTCTTCTTTGTAGTGCTGGGGATTGAAACCAGGGCCTTA
CGTGTAGAAAGTCTGTACTCTTCCACTGAGCTATATCCCAGTCCCTAATTTAAATTTATG
TGTTGAATGAATAGGTAATTCATTCACAACGTTCAAAATTCAAAAGATACAAAAGGGTTC
AACAGGGACACTGTTCATTTTCTCTTTCTTTTAGGCAACTGTTGTTAAAATTTTATGATA
TATATTTCCAGAAATCTTTTATGCAACTATAAGCAAATATTTTCTTCTTCTTCTTCTTCC
TCCTCTTCTGTCTGTGTCTCTCTGATTCTGTATCTTGCTTTTCACATAATAAAATATCTT
GGATGTTATTCTGTGTCAGTTACATGGTGAGTTTTCTCATTCATTTTTAAGTTGAAGTTA
TCCATTGTGTTGCTATGATATAATTTATTGACCTTGTTTATGAGAATTTTAGAGAGCATC
TCATTCAAATTTTACTCCATATGAGGAAATGAACTCATATGAGAGTCAAAGGAACTTGCC
AAAGCCCTACAATCAAGGTCTGCTAAGTTTTCAGCTATAAGAAGGAAAAACTCATGGCAT
AGGGTTGTGGCTCAGTGGTAGAGCGCTCACTGCATATGTGGGAGACCCTAGGTTCGATCC
TCAGCACCACATTAAAAATAAATGAATAAAATAAAGGCATTGTGCCCAACTACAACCAAA
AAGCAATTTTTTTTCTTAAAGAAGGAAGTACTCTTGATAGCCAAAGAGAAGAAGGAGCTG
AGGTGTGGACAGAATTTGAAGAAACATAGGAAGGGAAGAGGTTCGGAGTTCTTAGGGGAA
GTGCCAGCAGAGCTGAGTCTAAATGAGTCTGGCTGTGGGTGGTTCTGGGGACTGAATAAA
TCTGAACTAAAAATAGCTGAAGATGGAAATCCTGGCACAAATCTAGTCAGGTAAGTCGGA
GGCTTCCTGACAGTGGCAAAGAGAAATTTGGAGTTTGTGACCTGGGATCCTGTTGAGTGA
TCCAGGGAAATGGCATCAGTTAGATCACTCGAATTAATGAGAAAGTAGAGAATGCTTTGG
AGCCAGGCTTGGAATTTCTCTGATTCCCTCTACCACTCCCAGCAGAGTGCTCCTTGGAAC
TTGATTGAAGTGTCGGGTTGTGTCACCGTGGGACATATAGGGGAGGGGAGAGGAGGGTAA
TATGTCCATTCCGTTTGCCTTTTTCTTGAAAAAATATTTGCTCAATCAAACCCATCAACT
AACAAAGGCAGCAGAATTCAAGTCCGGCTTCTCTTCACAATCAAATAGGATGCTTTGCAA
GACTAACCAGTCTGTGTTTGTTTGCTTTAAATAAGAGCTTCTATTGGAAGGTGAAGTATA
GCCAGTTATGGGAAACACTAAACTGGCAACAACTCCGATGAGATTCTGGAAACTTGTGTG
ATAGTTTTTTGATCTGCCTGATCCGTCTCTATAACTAGAAACTCTTCTTTCATAGTCTTC
TGGTTATTCATGTGATAAATGGATAAATCTAGTGGTCTTTCACTGGTTGAGGTAGGGCTT
CTGACTAGTTGACCTATACTGTCCTCTACCTACAGAACTGAATGCACTGCAGGAGGAGCT
GAAGCATTTAGATGTCATTGTGTTGGGCTTTCCTTGTAATCAATTTGGAAAACAAGAACC
AGGAAAAAACTCAGAGATTCTCTCTGGGCTCAAGTGAGTGCCTGCATGGGGTCCTGCAGA
GGCTGTCATGATTCCCCTTCCTCATTCTGCCTAGAGGCCCTCCCATTCTAGGAATTTCTC
GGGTGGTTGATAGATCAAATGGGTTGAAGAATATCACCACAATGCTATGAAGCTTTGGAT
TCAATCTGTCCGTGTTGGCAGTGTTCAAATATTTGCTCTCCCCATTTTCTTTTTCTTTTT
GTTTTTTTTTGAACCCAGGGTCAATGATAAACAAACTCTACCACTGAACTACACCCCTGG
CCTGTTCTCTCTACCGTTGAATTTTTTTGATGGTCAAACCACGGGAGGATTTACTAGAAA
AGAAGTCCAGGAGAAAAGGAGGGAATACAGGAAATGAAAATGAATCAGGAAACTTGCCTT
CCCAATTTCTTGGAATTCTTTATTGGCTCCTTAGAGTCTATGGTTAAAATCCTGATTCTT
GGGGACCCTCTCTTTACCTTCTTTGTCTACAACATCTTCGTTTTAATCTCTGATTTCTTT
TTGTGGTAAAGTTTGGTAGCATTACTATCCTTTCTTGTCTTAATTTGGATCCCCATTGGT
TCCTGCAGGTATGTGCGTCCAGGTGGTGGCTTTGTCCCCAATTTTCAGCTCTTTGAGAAA
GGTGATGTAAATGGAGAAAAAGAACAGAAGGTCTTTACATTCCTCAAGGTGAGTAAACAT
AAACTTGGCATGGATTGGTTTCTATCGGTAGAGATAAACTGAAAGCAAAGGGGCTTGTGT
TAAAAAGAGATTTTCTGTTAAAAATTATGGCAATAACTCCTATGAAGACTTGGCTTCAAG
TAGAGGAAACATGTAATATCTGATAGCTCTGACATGAACTAACCTCCCTTACTGAATGAT
AATAATTCATTCATTAATAATAATTTATTAAATCCCTAACATGTGCAAAGGACTATGCTG
TACAATGAGTTAACAAATACTAATAGGATGAATCCTCTTTCCTGAATAAACTCATATATT
TATTCAGGAGACAAACACAGATATGGATAGGGTAGAGTGTCATATGGTAAGTGAATTTTG
AATTACAGAACATTAAAACAAGAGAATACTAGGATAGAAGGACTCCCTAGGATATCTTAG
TACCCTTGTCCCCAAATTCTTATCTGCAGGACAAGTCTGGTTCTTGATATTTTCACCCAA
CCACAGTGAACAGGGGGTGGGGTGGACAATATAGAAAGTTTTCAATAAATCCCAACCTAT
TGCATATAAAAGACTATAATTTATCCATAACAAATTACCATTAGGTTACACCATATAAAT
TGACTTTTTATTACTCAAAAAATAGTGATATCATCATTTTTGAGCAGCTAAGCCTAATAT
TGAAAAGTCCTTTATGGCTATAGTATATTCTTATGTCAAAATGAATGTTGATAATTCTAT
ATTAGTATTTAAAAAATAGCTATTGAATTTTTTTGGGGGGGCCTATGAAATCCTAATTCT
GGGACTTATTCCTTTAAACCAACCTATTATTTTTTACCTAAGAAAAATAAAACTATAGAA
TATGACTTGCCCTCATCTGGGGTTGTGGCTCAGTGGTAGAGCACTTGCCTAGCATGTGTG
AGGCTCTGAGTTCGATGCTCAGCATCACATAAAAAATAAATAAAAAAAGAATTAAAAAAG
AATATGACTTGCCTAAGAAAATGGAAGATACTCTTTTACTGATATACCATGATAAAATCA
TGGGAATAGAAGAGAGACAAAGGGAGAGTGCTCTCTGTTTATTGTTATGCTTTTTACCTT
CTGGTTGTTTGGTATTTGGTGTATTGGTGATGATACATTGAAATGTCTATGGTTGACTAG
AAGTATCTTAAATAGTTAATATATTAAAATGTATAATAGAGGAAATAATAATGGCAAGAA
AACCCCCTAGGTGTAGGAAGAAGACCAGACCACATAGAAGCAGAAATAAACTTATTTTTC
CATTTTTCATATCTGTACTCCAGAATTCCTGCCCTCCAACCTCTGAACTTTTGGGTTCTT
CAAAACAACTCTTCTGGGAGCCCATGAAGGTCCATGATATCCGCTGGAACTTTGAGAAGT
TCCTGGTGGGGCCTGATGGAGTCCCTGTCATGCGCTGGTTCCACCAGATTCCAGTCAGTA
CAGTCAAATTGGACATCCTGGAATACCTAAAGCAGTTTGATACCCAGTAGACAAGACTCT
CTAGGTCACCTTCCTAGCCTCACTGTCCTCCAAGGAGGGCATGCTTTGTTAAACTTGCTC
TCCTTGCTTCGTTCTCCTTTATTCCTCTGCCACTCTATAATTCTAGTGTAGGATTCTGGA
GACACAGTGAGAGCAAAAACCTCACCTCACATAAAAGGAGGGGCATTTCCATGATGGTGG
GTCCTAAAGCCCCTCTGAGCCGGACCCCACCAGAACCTTCCTTGGTGCCTGTC
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