SelenoDB
Release 2.0
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Transcript Report for SPT00001194_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesIctidomys tridecemlineatus (Squirrel)
Transcript IDSPT00001194
Transcript release2.0
External IDNone
Gene SPG00001098_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001194_2.0 # Transcript # Selenoprotein M (SelM) # Squirrel (Ictidomys tridecemlineatus) # Full length # Reverse
CTCGGAGACGAGGTGTCGGCCCTCAGCAAGGGAGGCGCTCCCGGGATGCTGAGCGCTTCA
TTGGGTCTCCGGGACTCTGGCAGGGTGGCTCCAGCCCCGCCGCACCTCCGGACCTACAGG
TCAGCGCGGTCAGAAGCTTCCCCGGGGGGTTTAGCTGGCGCCCACAGGTACTCCTGAGGC
ACCTGCGCATCCGGCGCAGCCTTGCGGTAAAAGCCGAGTTCCAGCACCAGCTCGTTGATT
TCCTTGCGGGTCATTTCACTGAGTGGGATGCGCTGAGGCCAAGAAGGGGTGAGGTCAGCA
TGTCGAACCCCGACTCTCGCTCCGCCCCCACCCGCCTCCCAAGTTTTCACCTCTAGTTCC
TCATAGCGACGGCCCAGCAGCACCAACTCGGGGTCGGCCCCAGGGAGGTGTTTCATCACC
AGGTTGTGGCTGAAAGGAGTGTTAAGGGGAGTAGTGGTGGACAGAGGGAGCTGGGGCTCC
TGGAGCCAGCAATACCGCCTTTGCTGAATGCTTATTCTGTGCCCAAATGGGATCCCCACT
TATACGCAAGGAAATTAGGGTTCAAAGAAATAAAGGGTCTTTATCTCCAGTTTCTTTCTT
GCCTACCCAATTTGAAGACCACTTTAGAATCCTCTGGGCAGTCAATACCAATCAATTCTG
TTGTCCAATGAAAACTATTTACCATCTCTTAATTGTGAAATTCAATAAAAGGAGATTCTC
CCAGGTGCCCTCCTCATGTCCCCTTCTCCAGAATAAAAGGATACTAGAATGGAATGTCCT
GAGTGACGAATGCCTTCACCTGGGGAGGAACCAGAGCATCAGAGAACATGTCCCCTTCCC
TTTCCTCTGTTCCCTATCTTTTTTTTTTTTAATCATGTTGGCCATTCCCCAAGAGGCTCG
AGGGATACAGAACCAGATATCCCCTTCTTTCAAACTCACCTCCTTTAGGCGGTTCAGCTG
TCATCCTCCACAGGTCTGGAGGGGGACAAAATGGGATAGGTCAGAAGTGCCTCATTTTAC
CCTAATCTCACCCCCAAGACCATTACATCTTCATCCTTGAATTGGGTTGAACTGTTGAGT
TATCCCTAGAAGAGCAATTCCCAAGGAATGAAGGAGGCGAATGAAGGTCCCTTGTGGGCA
GAAGGAGGAACTCTATGGTGAGAGAAACTCAAGCCTAGAGAAACTAATGAAATAGGTGCA
GGGCCAGACACCCATAGGGGGTTTGCCAGCCCTGGGGCTCTTGAATGAACCTATTGATCA
TTAATTCCTAAAGACAGACATAATAGCTCTGCCCTTCTCAGGAAGTAGAGACCTGGGTCT
GACCTTTTGCCCCTGAAATCTCAATAAAGAAGCAGACCAGAAGGAAACAACTCAGAACTG
CCCTGGGGGCCCCCATTAGAGGCACCTGCCATCTGGTCCCTGCCCCACCCATGCAGAGTG
GGGCCCTGCTAGCCACCTGTGGCCCAGCTCCACAGACCATCTGTCAGATTCCCTAAGGTA
GGATGGGAGCATCCCTCTATGCATTCCCTGAGGAGAGGCCATCTCAGCAGGAGTTCAGAC
CCCAGGACCACCCATTCCAGCCTCCTTCATCCTACCCACTTTTGTCAGACAGGAAACTAA
GATTCTGAGAGAAGCTGAGATGGTTCAAATCACATTGTAAGACAGACTTTGCTATGGAAT
TTCCTGGTCGGGGAGGTTGAAGGGGACTGCTGCATAATAAGTATTGATAACAGAGTTTCC
AGCCCCCTTCCCTGGCTTCTGCAGAGTAAAGGGAGGTGCCCAGAAAGTCATTCCTCCCCA
GAAGAAGGAAGAGAGATTCTCTGGAGCGCCAAGCCCTAGAACTGGGATGGGGGAGGAATT
CCAGGAATAAGTGGAGTGATAAGAGGGATGGGAAGTTGGGCTCCCAGAAGCGGGTTTGGG
GAGAGTCCTAGACTAGCAAAAAGTCAGAGACTGGGCCTGTTTGTCCAGGGACCTGCTGTC
GGGCCAGAAAGAGAGAAAGGCAAGGGTTTGGGATGCCAGGCTGAAAGGTAAGCATCCGGG
GGCTGGGGAGGGGGAGGGATGGTCCTGGCGCTTTGGGGGAGGAAAGGAGGGCGGTCGGGG
GTCGGGGTGTTCCTGGAGCCAGAGAGAACACTAATCTCAAGGTTGTGGGGCCTGTAGGGC
TTGCGGGTTGTGGTGCTGGGGTTGGGGGCCGGCTCACTCACCTCTACCCGGGCCCGGGCC
AGGCCGCGCAGACGGTTCCAATCCGGCCGGTAGGTGGTGGCGGTGGTGGCTGGGGCCACA
AGCGCCGCAAGAAGCAGCAACACTGGCGGCGGCAGCAGCAGGAAGCTCAT
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