SelenoDB
Release 2.0
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Transcript Report for SPT00001745_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001745
Transcript release2.0
External IDNone
Gene SPG00001650_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001745_2.0 # Transcript # Selenocysteine synthase (SecS) # Pika (Ochotona princeps) # Full length # Forward
AAGGGCAAATGCCCGGAGGAAGGTTGGGATGAAACTACCCTGGAACTCTTCCTGCACGAA
CTGGCAGTCATGGATAGCAACAATTTCCTGAGCAATTGTGGTGTAGGGGAGAGGGAAGGG
CGAGTGGCGTCTGCCCTGGTCGCTCGTCGGCATTACAGGTAATGTGAAAATTCCTGTTTA
TAATGTTGGTTAAGGGGACTGGTGGCAGTAGGCATCCTATTAAGTCGTAAGCTGTAAGCC
ACTTTTTTTTTTCTATTCCTACTTCCAGTTGCTGCTGGGAGGTGGACACAATTTGCCTGA
GCAGGTGCTTTTCAAGAACCGTAGGGTTAGAAACTCTGGGCTTTGGCCCTTCCCCTGGCT
GGGACTGGGGTTGTTAGCCTAGGCGGTCTGTTCTGCTGAGAATGCAAAGAAGAAGGGGCC
TATGGGGGGGAAAACCTTAAACACATTAAGGCTCTTTGCCATTTTCGTAAATGCCTGCGA
GGGGGGGAGGCATTGGAGGACGAGCAATGAAAAAAAAAGCGGGACCTAAGATATAGTTGG
TGGTTGAGGCCCGCCCGTTGTGGGGGAGAGGGGGATTGGAGAGAAGAGTATGTGGAAGGT
AAAAGCCATGTTTAAAGAGAAAAATATTTGATGTTTAATAAAATTTTTGAAGAAAATCGG
GAGCACAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGT
TCTTGCTTAGGTTTATTCATGGAATTGGACGATCTGGAGATATTTCTGCTGTGAACCAAA
AGCTGCAGGCTCTAGCCTTTTGAACAGAATTACCAATTCTTTGGTCCTGGATATCATAAA
GTTGGCCGGTATGTACTATGTTCGTCCTAATGCTTGTTACTGACCAGATAGCGCACCTCT
GCCTAATTTTTATATTGATGTCTGTTTACAAAAACAGGGAGTAGATTTGGGTCAAATTGA
TTTGTTTATTTAGAAGGCAGAGAGACAGAGAGAGAGAGATCTTTCATCTGCTGGTTCACT
CCTGACATGGTCCTTAGAGCTAGGTTTTGGCTAGGCCAAAGCCAAGAACCGCACACTCCA
TCCTGGTCTCCCACTTGGGCAATAGGAACCCAAGGACTTGGGCCATCTTCTGCTGCCTTC
TTGGCTGCTTTAGCACGAGTGGTTTGGAAGCAAAGCAGCCAGGTCTTGAACTGACACTGT
GCTGCAAGTGTGGATTAAGCTGTGCTGCCATATAGCTATTAAAATCTTTTTTGAAGATTA
AAAAAATGATAGGCAGAATGACAGATAAGAGACAGAGAGCAGTTGGCATTGTGGTATCGG
AGGTAAGTTGCTAACAGTGCTGGCATCCCTTTGTGGGCACTGGTTTGTGTGCCAGCTGCT
CCACTTCACTATCCAACTTCCATTGAATGGCCTGGGAAGAACATATCATCCCCCATGTCA
TCCACATGGGGACCAGGATGGAGCTCCTGGCTTCTAGTTTAGCCCTGACTGTTATGGTCA
CTTGTAGGGTCGACCAGTAGGTAGAAAATTTCTTTTGGAGGGAATGTGGGAAGGAGATAG
ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATCTTC
CATTTACTCATTTATTCTCTGGTATCTGCCGCAGCCAGGGCAGGGCCAGGCAGGAGCCAA
GAACCAGGAACTCCATCTGGGTCTCTCATGTGAGTTGGAAGAATGTAAGTGCTTGGCCAT
TATATGCTGCCTCCCAGGCACCTTGGTAGGAAGCTGGGTTGCAAGTGGAGGTGGGACTCA
ATTCCAGGCACTTGGGTAGGGCATGTGGGCATCCCGAGTCATGACTGCCCCTCTCTAGTA
GCTTCTGAAAAGACAAAATGCAGAGAGTCCTTAGGATTGAATGGATCTGGGGGTGAACTG
GGCTGTGAGCTTCCTGAGATCGAGAGCGGGAAAAGGAAGCACTCATGGCCATCATTTTAG
GATTTCGTAGAAATAGGGTTTTTTTTTTTCCTAGAAGGATGCTGGGATAATGTTATGGTA
TAACTTGTTTCACTTCTTATTTGTAGGTGTCCATTCAGTGGCCAACTGCTTTGTGGTTCC
TATGGCGACTGGAATGAGTCTAACTCTGTGTTTCCTAACCTTGCGACACAAAAGACCAAA
GGCAAAGTATATCCTGTGGCCACGGATAGATCAGAAGTCATGTTTTAAATCCATGATCAC
TGCAGGTAAATGAAGAGAAGTGACATACAAAACATTCTAAAATCACAATTAGAAAATCTA
AACTTTTTATATAGAAATAGATGAATGAACATTTGATCTCTTCCTTGTTTTGAAATTGTA
TACATTGATTGCTTTATACAGCTTTTGATTTATGAATACTGAACTGTTTACTATTAAATG
TTTCATAATTATTTCTATGGAGGCTTTGATTATGTTTTAGCTAAGTGCGTCACCTCCATT
AAAAATTTGATAACAATTTTACAGTTGAATTGTTTGTACTCTCAGATGTGTCAGTGATTC
CCAGGCACCTGAAATGTATTACATTTTCCTTTAAAGATAAACCAGTAACTTGCTGATGGT
GGTGTGTTTCAGTGTTCTAATTATATTTATGTTGCTACAAAATAAAAATGACCATTGTTG
CTGGAGGGTGAGCAGATTTCTCTTTATACAGAAGTTGAACTGGACTAAGTGATCCTTTTT
GTCATTGGTATCTTGTTTCTGTAGAAGAACTTTTTTATCATTTGTTTCAACTATACATTT
TTATTGTTGTGTGTTAATTTGTTAATGTATTGANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTCCTCTCGTAGGCAGCGGGCCGCCGCCTCCTTTTTCTTTTTTTCCCC
CCCAGCCGTAGCCGCCCCAACCGAGAACGCACCCATCCCCCCTTTCCATCTACTCTTCCT
GCCACCCCTCCTGTTTTCTCTTCTCACTTTTTACTTCTTCTGCTCAATTACAGCGGACTT
CCGCCTTTTTATATTTCTCCCACCATTTGGCATAACCTGCCTCGCCCCGGTCGAAGGCAA
GGGCTTTTCCAGATTTCCTTCAGGGTTGCGGCGGCCCATGTGCTTGGGCTTTCTTCCACT
GCTTTCCCAGTTGGATCAGAGCCCCAGTGCAGTGTTAATGTTGCAGGTGGCAGCTTAACC
ACTTGCCACAATTCTGAATCCCAGAACTCTTATTATTGTATCAAAATGTTAGATTGGTGG
GTTCATTGAATTGTTGCTTTTTAGCTTAATTGTGACCTGCCTTTGATTAATTTCAGAATT
GAGCCAGGTTTTCATTACAAGCGGAACATTCAGCAGCCAGAGTTAGGATTGAATGTTTGT
TAGTAGAATAGCACTGCTTCCTTGAGTTTTAGGTTTTTCCCTTGTTTTACTGACCCCTGA
CATTTAGTTTCTGCTTGCCTTGGGTAGGTTTTGAGCCTGTGGTGATTGAGAATGTCTTGG
AAGGTGATGAACTGCGCACGGACCTGAGAGCGGTAGAAGCCAAGATCCAGGAGCTTGGGC
CTGATTCTGTTCTCTGTGTTCATTCCACCACGTCCTGCTTTGCTCCAAGGGTGCCAGATA
GGTGA
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