SelenoDB
Release 2.0
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Transcript Report for SPT00001768_2.0
Identity
TranscriptSelenoprotein R (SelR)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001768
Transcript release2.0
External IDNone
Gene SPG00001673_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001768_2.0 # Transcript # Selenoprotein R  (SelR) # Pika (Ochotona princeps) # Full length # Forward
GGTTGGCCTTCATTCCATGATGCGATCAGTTCCGAGCTCATTACGTTCACAGATGACTTC
TCCTACGGGATGCACAGGGTGGAAACCAGCTGCTCTCAGGTCAGTTAACTCCGTTGGAAA
ACCCAGTGTGCCACACCTAATTGTGCATCTATAGTTACGGGCCAAGAGGCTGGACAGAAG
AGGAACAAATACAGGGAAGTCTTAGAAAAGTTCAAATGATTTCTCAGCCTGCAGGTGGTT
TGCAACCCTAATGAAATGTCAGCCTTAATATTGACATTATTGAACACAATCACTGTTAGG
AACTGAGTCACCAGACTCAGAATAGGGAGGGGAAGGCTGTTCTTGGAGTGTATAGGGATT
TTATTATGTGGCCTTATTTACATAAACTGACATTTTGATAATCCCCCCTCCCTGCAGTTC
TGTGTCTGCACCCCTCTGGCCCCCTTGTTAAGTCACAATGCCAGTAGTTGCAGTGATACC
TGGCCAGGCAATGGGGACTCTGAAGTGGCCTTTCTCTCCTTCATGTGAGGAGGAAGTCCG
TGTCTTCAGTGAGCTGAAACGCAATGCCGGTGTCATGTAACTGCTTCCCAGTTTCTCCGA
GTCTGTAGACTTGTCTTCATTTTCTACAATGTTTTTTATTAGTTCTACAAATTAAACCAA
ATTATTGCTGGCTCTCAGCAACGAAAGCACAAAGATGACTAATGCATTGAGAGGTGAATT
TGAGAGTATTTTGTGTCTATAGCCAAAGATAAAGCCAGAAGTCTTTGACAGAGGAGAAGG
TCAATGGCATATTCCACAGCAGCTCATCCTGTTCTTTCAGTCTGCTTTTCATAAGTGAAG
TCTGGAAGTTGTGGCATTGAAATTCACTGATATGACAGAGTATTTTGTTGGGGAGATTTC
TACTGCGAGGGAAGAGGGCACAGCCAGGCAGCTGTAATAGCATATTACATAGGCCTCCCC
CAGCATATTTCTGTTTGCCCTTTATACATTTTTCTTTAACCTCCTTCATCAGGGACAAGA
TATTTAGGGAGTAGGTAGCATATTTACTACCAATGAGGGAGGAATATTGGTTTGAACTTA
ACCATTTGATGAATTTCTGTCTTCATTTTCTTAAAAAAAAAAAGACTGTTAAGTTTATTA
TCTTTCATGTATAAACTACTACTCTCTGCCTTGAAAAGCAGGCTTCATATTTTATCTAAA
TCACATTTTCAACTCACTCTAGTTCTCAGATGGGAGCCTGTACAGTTGATAGTGAGACTT
CCTGATGCTGGCTCTCACCCGAGAGCTTCTCATTTAATTGGACTTGGGGTAGCCTGAGCA
GCACCAGCTTTCAAAGCTCCCCCGTGAACACTCACAGTGACTTTATGAGGTAGGTCCTGT
AATTCTCCCTTATTTTACAATGGAGGAAACCAAAACACACAGAGGGTTATTAAACTTGAG
TAAATTTTATTTAGATTTAAGTAGCAAAACTGAGACTTGCATTTAGGCTTTCTGGCTGCA
AAGCTATTTATGGCTCATAGAAAGACAGTTGGAAAGAGGTAGATTGACAAACTGGAAAGA
GTCCTAGAAAAAAAGATTTAAATCTCATGATCTCCTAGAAGCTGATTTTATGCAATCCAT
TTCAATTGCATTTTAGTTGAGTTTATAACTGTCACACACACAACTTTTCGGGTTAGCTGT
CAAAGAATTTAACATTTCTGGCAAAAAAAAATAATAGTGAGATGGTACAAGCAATTTGTC
ACTTAGATGCAAAATACTTAGCAGACCTCCTTTAATGCTGAGTGAAAAGGCTGTCGTATA
ACTACTACACTGCTTCTCATTCAGAGCTGGAAGAAAGAGATGAATCTTTGATCTGCTGGT
TCACTCCCTACACACCTATAAAAGTTGAGGCTTGGCCAGGCCAAAACCAGGAGCATGGAA
CTCCAGCTGGGTCTGCCATGTAGGTAGCAGGGACCCAGTTACTTGTGCCATCCGCCACTG
CTCTCCTAGGTGCATTAGCGAGGAGCGGGGTTGGAAGTGGAGCAGCTGGGACTGGAGCCA
GCTCTGTTATGCGTATTGAAGCAATGACCTAACTCACTGTGTCACAACATTGACCGGCAA
ACTGTTTTTTAGAAATTGAGTCCTATGAAAACAAGGTCGTGAAGGCACAAAAAAAAAAGA
AACATAGATATTTTCTTTGAGACCCTACCCTCTGATTTCCTTGGGACTAGTTATAATTCC
CAGTTGGAATAAGTATCCTCCTTTCTCTGTGGCAACTGCAGAGATGACAACACCAATCAT
CAAGAACAGAGCACTATGCAGGAACTGTACGATTGCTAAAGGGAAGCGAAGTCCACAAAT
GATGCCAGTGTCAGACAGTAGTCATAACAGATGTCTAGCTAAACCGGGCATAGGTCTTTG
ATCTTTGTTTAAAGACCAGGGTAACTAACTTGTTGATACAGGGTTAATTACTCTTGTCCT
CAATATCCTTTTCTGAATTTTGGGTTGTACTTCCAACACCTTCATTTTCAAGTACTGGAT
CGTTTCTTAAAGATCAATTTGAAATTTAAAGAGAAGAAGGAAAGAATTTTGTTTCCATAA
AGCATGTGTTGAAAAGCATGCTTCATGAAAACAGTTCAGTGTGGGAGACAGGCTCCAGCA
GTAAAGACCACTAATGTTTGCTGGACTCTGCCCCATGTGGTCAGGGCAGCAGCTGCCTGT
CCCTCGCATACAACAACAGAGCACCAAATTCTGATGCGCTGGATTCATTTCAGTATCCTT
GTCTCTTAATTTGTGTTTCACACGCATTCATTTTCCCTTAAAAGTTTTTCTTTTCCTTTT
TATCCTGCCTCCTCTTTACCTTGACTTGAAAAAAGCAGCTGGTTTAATGGTTCCCATACC
GCAACAAACACTTGTGTTACACTTCTTGGTTTTTCTATCTTAGCACTGGTTTTCATTATC
AACTTATCTTCTTGTACCTCCCTTTGTTTTTGGTTTATGTAGCTTCTCCTCACAATTCCT
CCTGTTTTTCTTTTTCTTCCTTTAAAAAATGTTATAGTTTTGATGTTGAGATGGTGTGGG
AAACATCTATGGTTTGCTATCCTGCTTTCTAAAATTCTTGTTTTGAAGTTTATACTTTTT
CCCTGTTCTGTTATTGCATCAATATGTTTTGTGTTATGAAAGCAGTCTTAGATGCTTTCA
GTGTCTCATACATACTCTTGGTTGAATATGTTCTATGAACTGCTTCTCTCCTTTTGGTAA
TGATGGTGCATCTAAGTATGAAAACCTTCTTTCCACCAACTTCTGCAAACGTGCTAAGCT
TTTGTGATGAAATAGAAGAACTTTACAGGGAATATGGTGACATTACACTTGGCTTATGGG
TCCCCAACTCTTGTTTGGATAATAGGCTTCTTTTTGTTTCGAATTGTGTGTGCATCACAT
CATGCCTGCAGTGAATGAGGTTTGTTATGTGGGTAGGAATTGCAGACAGGCTTGGGAATC
AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGATGGTGGGAAATACCTCAGTGCAGAAATAGGGAAT
TGAGCTGAATCCATTGTTTGCATTTCTCATGCACCCAATTGAGAATTGCAGATTTTAAAC
AATAATGGTTAAGTTTGATGCTCACTTTTTTAGAGAACACCATTCCCAATTTTTTAAGTG
GGAGGTTTCATTGATAAAGGGTTCCTAAGGATTCTTTTCCACCCTTCGGAGTGATTCTCT
CACACTTGTTTAGCATGAAGACTAAAATAGTAGGTATAAGTCATATTCACTTGTATAATA
AAATAAAATAAATCCATGCAAAACAGCTTTGCAAAATGCACACCAAAGATTCTGTCCTGA
AATAAATCCTTAACATCAGGTTTAAGCGATTTCTTTCTTGGGCAACCAGTTTGTTTCAGT
TACAACCAGGTGTGCTGAGAGATCCCCACACATTGCCAGTTGGCTGGGGTTGGGGAGGCA
AAGCTTGCAGGCGGCTAAAGAAACAATGCATCACTGACAACTTCCATCCATCATCCCAGC
CCATGGCCAGGCCTAGAAGGCTGGAGAGAATGGGCTCCATGTGCGCGGCCCTCAGGGAGG
AGCCTTCAGAGCTTATGCACTTCTGAAAGAAGCCAAGTAACAGTCTTTTTATGGGAGATG
AGGTGTACCTGGAAGGAAGCACAAATGGCACTAGGAAGTTCATCTTCTCTGGCCTCTAAC
TCTGCAGGCAATGAGGTGAGCATGTCTGTGGTTGGTATAGATACATGTGAGCACGTTCCT
GTGTTTTAAAGTGATGATCCTCCCTGGTTCACCCAAGCCTGGTGTGAATCTTCCAGAACA
CCCTGTGGTAAACAGAATGAAGCCATCGCTGTTATCATTTTCAGAAGCTCACACCTTTTA
TGACAATTCACCTACTCTGTTCCCAAATAAGTGCTTCTTGTTCCTTTTATCCTAACTGTA
ATTTCGCCTTCTCACCTCCCTTTGTCTTTTGTTTGGATCAGGAACACATTTATAATCCTT
GGGTATTTTCCCCTCTGGTTAAGCAGAAGAATTGTTACAGGTTAGTAGAGAACAACAAAA
TGATAACGTTAGAGATTGAAAGCCAGTGCAGTTCAACAGATTCAATTACTGTCATTTCAG
TTTCTGAAAGATAGCCTGGGCTATGAAATCCGTGTTCTCCCAAAAGGCTTCAAGGGTATT
TTTACTATGCTTTGAATTGTGAATTGATAGAACTGTTCTCTAGATCTGCACAAGAGATCA
TTAATAAAAGTAAAATCATTTATTTCTCCAGATATCGATATTTTCTTATTAAATATCCTC
CTTACTCCACACACAAGTGTCATATGAAAGGTTTATCTCCCAGCTGCCAAACCATCAAAG
TGCTGGAGCTGCCCGTGAAGGTATAGCTGGTACACATTCTGGTCACCAAAAGCCCTAGTT
ACTGCTGGCCAGCAGCGTTGCTGTTTGGCAGGCAGAAATGGGTATTTTCCTGTGTCCATT
GGGTAAGCATAAAGAATTTTTACTGGTGCATCTTAGCTGTGATGCCTGAAAATTTGGCCT
CAGTTGTTTATAGAAAGGAAGAGCAGTCTGAGCTGTCAGCCTTGATATTACCTAAACCTG
TGTAGAACATGGTAAAATAATGCAGGTTTTTTAGGCCTGTTTCATATTTTCCAGGCAATA
GATCAAATCAGTTCAGGGTTCATTTTCAGTTCTTTAATAAGCTGACACAGTGTGTTGGCA
GCACCATAAGAATGCCCCTTTAACAGGGAAGTGACATCTAGTCAAAGTTGTTTGTGTCCT
ATTGATAACCAGGGGACCCTCGAGAATCACACCGAGCATTTGGAATGGGGTTCAAGAACC
GGGATTCTGCTTCTTGCCCTCGTAGTAAGCACCTTTCCTCATTACTCTTTCATCGTTTCC
ATTTGGTGCTTTAGCCACAGTACCCTCTCAGAGCTTACTCTTTTCTCCTGCAATGGCTAA
CTGTTCTATATACTCTAACAACACAATGAAAAGAATTGAGAACTGTATACCTTTCTGTCA
TGGGTTTACCTGCATCTTGACACTTCATTCTCCTTGAAATACTCTCTCCTGGTTGCCTAG
TTCGTTTCTGTAGGGCTTTAGTCCAACGTCCAAGAAAATCAATGGAGGATTTTCTTGACT
TCCCTATCTAAAATGCCCCAAACCCTGTATGCATACGCCTTCCTTTTTCACCCACTGCTT
ACCACTGATTTCTAATTACCATGTTTTACAGCTCAGTAACTCTCATAGATATGGTCAGCT
TCTAACACTAGAATGTAAACTTTGTGAGACCAGGAACTGCTGGCTGTATCTAGAGCCCAA
CAAAATGCTTGACATGCAACAGGCACTCCAAAATATCTGTTAAAGGAATGAATGGCAATC
ATTGACCTTGTGCTTTGGTTTCTGTGTTTTGTGATGAACAGCATGTTTTCGCAGCCTGTC
TGAATGTGATACTCTAATGCCTCTGTCGCTTTGCACCTGCCCCTGCTGAGGAGTGAGAGA
TGCGTGCGATGTATTCCATCAGCTCGGCCGACTATGCCTGGCATCGAAGCAGTTCATGCA
AGGAGCCAGTTTTTTGGAGAATTTTTTCTCTGGCTTGATTGTCCCTTTAAATTCCATCCT
ATTCAGGTTTGTCTCCTCCCTGGATTTCTGGATAAATCAATATCTTAGGTTTTAACTGAA
CGCCCTATTCCTTTTCCATGCATTTATGTACAGGAGTCAGCTGGGCACTGCACCTATCGG
AGCTGGGAAGCAACAGCTCTGCAGTCCAGAGATCTCTCCATGTGCTACCACTGCAGCATT
GGTGACATAAATCTCCTGAACCTTGCCATTGCCTTGCTGGGTTCCAAGAACATCCAGTGC
TTGTCTGATGTTAAGTTTTACTGCCCATGAAAGCAAACATCACCTCGGTCATGGCCAGTT
AAACAGTATCTTTTACAGTGGCCTTCTGCATATCTGAAATCCACCCATCCAAAGCCAGGA
GTCTTGCCAGGGGCAGGATTTTATTTTGCCATGTTGCTTACAAGGGGAAATGAAGAGTCA
ACCCAATTTGTAAAATGTGTGCAATCATTTTTCAGCTTGCTGAAATACTACACAGCTCAA
ACAATACAATGGCTCCTAAATGATTTCTGGCATGCAGAATTCCAGTGCTATTATTATTAT
TAATATCATTATTAGCATGTGGTGCAAAGCCTGCCAGAAACCATCTTTGTAGCTATTGAC
AGGTGGATCAGAACTCCTCCAGAATGGCTCCCATCATAGCCCCATAGGCCACTCATCTGT
CTACACAGTTTGAAGCAAGCGCATCACAGAACCCGCCTTGTACGCGTCTCTCCTGACATT
GTTCTGTTTGTTCTGTTCTTCTCTTTCAGTGTGGTGCTCACCTCGGGCACGTTTTTGATG
ATGGACCTCGTCCAACCGGCAAAAGATACTGCATAAACTCAGCTTCCTTGTCGTTTACAC
CGGCAGATAGCAATGGCCCTGCTGAGGGAGGCAGTGGGCTCAGTGGCCCAGCACCAGCGA
CAAAG
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