SelenoDB
Release 2.0
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Transcript Report for SPT00001776_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001776
Transcript release2.0
External IDNone
Gene SPG00001681_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001776_2.0 # Transcript # Selenoprotein U (SelU) # Pika (Ochotona princeps) # Full length # Forward
AGAATGTCTTTCCTCCCGGAGCTGGGCTTCTTCACCATGGGGATGTGGTCCATTGGTGCA
GGAGCCCTGGGGGCTGCGGCTGTGGCACTGCTGCTGGCCAACACAGATGTGTTCTGGTCC
AAGTCCCAGAAGGCCTCCCTGGAGTACCTGGAAGATGCAGACCTGAAAACCATACTGAAG
GGTAAGGGCCACCGGGCCAGTCCCAGTACTTTTCCAAGACCCTGGCAGGCAGACTTGCCA
AGCTTCTTTTTTTTTCTTCTTCCTCTTTTGTTTTCTGTTTGTTTCTTTCTTTTAATTGAA
AAGGGGATGTAACCAAATTAGGACCAATTTAATAAGGCTTTTTAAATGACTGATAATCTA
TTACCCTAACACAAAGCTCTTGCTTTCTTTTGATGTTTCCTTTCTGTGTTCACCTGATAG
GGTTGTAGTCCTGGTGTGTTCTTTTACTTTTCCTGATCGAAAACATTCACGTTCTGTCTT
GGTCTAACTAGGGTCTAACATTACTGCCTGTGAGTTAGCAGTCTTGCACCATTGTTTACT
AAAACAGTTCTTCCAGACTGTCCTGAGGAATTCGGGTCCTTGGGGAATCGTCATACAAAT
GAGAGTGCTTGGGTCAAATAAGGATGAGAAACAATTTGTCCTTGGTGTTCCTGGCACACT
GCAGGGACTTACTGAAAGAGGGTCTGGATGGCTCCTGACATTGGCACAGCCAGCTCCTGG
CTGTACCCAAGCAACAGTACCTGGGGAAGCTCTGCGTAAGGTCTCTTTAGAACAGACCTG
CCCATCTGCCTTGTCTTGGGGGCCCACCCAAGCACATGGCTGACCACTGACCGCTGATGC
TGACAGTCACACAGTCCAACAGGGTAGCTCTGCCTCCTCGCCAAGTGCTCTCAGCTCCAG
AGCCCCACAGTGCTGACCTGGAGCAGGAGAGCTTGATGAATGTTCTGACTCACAGATTGC
TGGTCTCCAGGTTAGCTCCTGGAGGGAAGGGATCATCGTCTTCTCAGAAAGGAAGCATGT
CCAAGGCAGGGGGCAATGTGATGGCAGAGATACGTGGTAGGTCACCTTGGTAGAGAACTA
AGAAGTCCTTTCAGACCTCTTTAGCTCTGTAACCAGAGTGTTCCAGTCTCTCACTAGATT
AAACACAATGTCAGCACCAGTACCATGGCATACTAGTCACTGGTATTTCATATGGGCACC
AGTTCATGTCCCAGCTGTTCCACTTCTGATCTATCTCCTAACTAATGGCATGGAAAAGCA
GCTGAAGATGGCCCAAATCTTTAGACCCCTGCACCCACTTGAGACACCAGTAAGAAGCTC
CAGGCCACTTGGGGAATGCACCAACAAACAGAACATCTTTCTGTCTGTCTTCCTCTTTTC
TCTCTGTAACTCTGCCTTTCAAGTTAAAAGAACTTTTAAAAACAACAGCAACAACAAAAT
TGCGGGGAGCTGGCATCGTGGTCTGTAGCATGCTAATGCTCTGTCTGCAGCACCAACATC
TAGATGGCTGCCAGTTTATGTCCCAACTGCTCCACTTCCCATCCAGCTCCCTGCTTGTGA
CCTAGGAAAGCAGTCCTTGGCCCCTGCACCTGTGTGGAAGACCCCGAGAAAGCTGGTTCC
TGGCTTCTGCTTGGCTCAGCTCTGGCTGCTGGAGCCATCTGGGGAGTGAACAAGCAGATG
GAGGATTTTTTTTTTCTATTTCTGTCTTTCCTTCTCTCGGTATCTCTGCCTTTCAGATGA
AAATTAATAAACTTAAAAAAAGAAGACAATCTTCCTCCTGCTCCCCCAACCCCATCCACA
CTCAGCATCCCGCAGAGGCATGGATTCCTTTGGGAAATCCTAAAAGAATAAGAGTTCTCA
TACCAGACACTGCAGTCAGCTGTTTGGTATCCATTGCTTCATGCTCCCTACAGTTCACAG
TGGAGCTACTGGATGCCCACGTGTTACCCATGTGGAAGCTGGGGTCCACTGAGGGAGAGT
GACTTGCTCAGGATCATCCAGCTGGATTTGGGAATCAGCCAGAGCTTTACCACCAGGCTT
GGACTTCAATACCATCTCATCCTGGAGTGCTTTCTTGTTAGACATCATCTTCTCTCCTTA
ACATGACATTGTGTGTTTCCTTGCTTCCTTCAATTCCTCTGAGTGTGTTTTTAGGAGTGA
GTTTGCTTCGATCACAGTGCAGACTTTTTCACTTGTGGCTGTGTGTCTGCCTTAAAGGAT
GATTACAATGTTCAAGAACAAGAAGTAAAACCTTTCCCCCCCAAAAAAAAAATCTCTGTT
TGGAACACTTGTTTTAATGGAGGAAGAAAGAGTAGGATTCTAAGATCAGTATTTTTTATC
TGTTTCTTGGGTTCCTTTTCCCCTGTGTGAAACGCCCATCCAGGTCCTCTGTGAGGTCTG
AGGCTTCTAAACTTGGTGTGGCTCAGTGGAGTTTGTGACCACCTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGAGAAGAGTTCCTGACGAGT
GGCGGCCAGTGCCTTTTGAGGCCAGGACCCAAGAGCTGCAGGCCAGCCCTCCCCTTGATC
AGCACTGACCTGTGTCCTACTACCGGCCCTAGGAATTTCTGTCAACTCACACTCTGTCTG
GTTTTGACTACTTAGCATCTCCACTGGGATTAGTAACACATCTGACTTGCCTTTGGAGCA
CCGCCCACCAAGGCTTTCATCCCCATGTAGTACCATCTGGATTCTGGGCTCACTGACTGG
TTCCCACACAGAAGCTGATTAGTCAGTGAGGAAACATCAAGGGAAGGCAGGAGTGTGATT
GCAAGGGATGGGGGAGAGGCCGAGAAAAGGAGATCTTCTATCAGCTGGTTCACACATCCA
AATGGCCACAGTCGCCACAGCTGGGCCAGGTCAAAGTCAGGAACCAGGAATTTCCTCCAG
TTGTCCCACATGGGTGGCAGGAACTCAAATACTTGAGCCATCCTCTGCAGCCTTCCCAGT
TGCGGCAGGAAAGTGGATTGGAAGTGGACTAGCCGGGCACTGGGTTGGGTCCCGGTTGCT
TCACTTCCCATCTGGCTCCCTGCTTGTGGCCTGGGGAAGCAATAGAGGATGGCCCAAAGC
CTTGGGACCCTGCACCTGCGTGGGAGACCTGAAAAAAGTCCCTGGTTTCAGTTCAGCTCA
GCTCCGACTGCTGTGATCATCTGGGAGTAAACCAGAGGATGGGAGATCTTTGTCTCTCCT
TCTGTCTGTAAATCTGCCTTTCCAATACAAAATTATTAAGAGAAAAGGAAGTAGCTAGGA
TTGAAGCCAGTGCTCTGATACGGAATATGGGTATCCCAAGCAGTATGTCAATCTACAGTG
CTATAACACATGCCTATGCTGGCTCTATTTCTTGATTTTATTATTTATGTGAGGGATAAA
GAGACAGGGAAAGTTTCCATCTACTGGCTCATCCATAGTTGGCCACAATGACTGACGTGG
GGCCAAAGCCTAAGCTAGGAGCCAGAAAAACATTCCAGGTCTCTTGTGTGAGTGGCAGAG
GGCCAGTGACCTGAGCCATCACCTTTGTTTCCCAGGACCTATTTTAGGAAGAAGTTAGAA
TCGATAGCCAGCGGTGGGAATCAAACCCATATACTCAGTGGGAGATGTGGACATCTGCAC
TGGCTTCTTAACTGCTGGGCTGGGTACCTGCCCTGGGAGTGTGATGGTGAGAGCACAAAA
TGCTAATGTCAGGGGATACTGCAGTTACTGTACCCAGCTTGCTCCCTTTCTAATGGGTAA
ACCAACAACAATTGTGGTCTGGTGGCCTGTCCATTTGGTAGCACAAAGCCTGTGTTTTGA
GATTGCTGTTTTGCTTAGGAGAAAACCCAAAATGACTGTTGTATTGCTTTTTATGTAGTG
ATGTTGGCCCTGTGCAGGATGTCATTTTCATCCTGCTGGATACCCTCCCCGACCCCAAGG
CATTGCTCCTGAGTCTTACTATTATTATGGAATATATGCAAAGCCCCCCCACATTACCTT
TATGACATTTTCATGCATATTATGTCATGAGGTCCTTACCATGCCCCCTGGAAAAACAGC
TGTTTGTCCTTACTCTCTTTTCCAGGCAAAGATACTAAAGTGCAGAGGTTAAGATGATTA
TTTCATGGCCTGCCGTAACAGATTGCCACAAACCTGGTGGTGTTGGACAGCATCCATTTA
TCTTGCAGCTGTTAGGGTATGGGATGTTGTCTCACCCCTCCAGCAGGCCATAGAGGAAAA
CCCATTTGTGAATCTTTTCCCCAGTTTTTGGAGGCCACCAACACTCCTTGGCTCATGGCC
CCTGTTATTTTGGAAGTCAGCCCTGCCTGTTCGGATCTTTGTCCTGCCACATCACTCCAA
TGTAAACTTTTTTCCTTCTTGTTTGGTGGGTGCATAAGGAGCCTGGTGACTGTAGTGAAC
CCTCTGAGCTGATTTAGATAAATCTCTTTATTGGAAGATCAGTGAGTGAGCAATCATAAC
TTTGTCTCAGCCTTAACTCCTGAATGTCACAGAACCTACTCACAAAGTTTCTAGGGATTA
AGCTATGGATATTGAGAGAGGCTGCCATGAAGGTGGTGTCTGAACTAGGGGTTCTTGGTT
GTGAATCTATGGTACCTGCAGATGTCAAAATGGAATGCTGTTTGACTTGATTGCTTGGAG
CCATTGCAACCCGTAAAGTTCCAAGAGTAACATCTCCTTCCTAATGATAGCATGCTTTCC
TGTACCTTGGGCTGTGCCCTGGCAGAGCATTTTTTAGAAACCTAGATGAATGGCAATGAG
AGTTATTTGGAGTGACTCCAGGAGGAGTTGCATGACTTATTTTACACGTCTGGCTTGGAC
AGGAACCTACTCAGCGTAAGGAGCCTAGGAGAAGTGAGTCACGAAACCTGTTCTCTTCAA
GCAGGTGGCCTGTGCCCACAAGACGCTGCAGTCCTCTTTGCCCTGGGCCAATTTTGCTTT
TACAGGAGCTGTTGATGAATGCATTTTAATCAATTCTGTTGTGTCAGCTATTATTCTTTC
CCAGTGTGGAAAATTAAACGTAGCTGCCATTGGATAGCAGCATATTTGTGTTGAAGACAG
TGGGTCGTGTTTAAAAGGGTTTCCTTCCCACTGTGGGAATCCTGGGCTGAGCAGGGGGAC
CTGATGCCCTGTTCTGAGACCCAGTGCTGGAGGTGCTGGACCACTCAGGCTTGAGTTGTC
TCTGGTGATTGTGTTACTGCTGCTCCTCTCTGTTCTGTTCCAGCTGTGTGGGGGAAGGTG
AGTTGTTGGCCACCAAGATCCAGAAGTTCCCATCCCTGAAATCTACCCCTGCCCTACCTT
CCTGTAGGAGGCTGCAGACCTATCTTCCCTGAAGCCCAGGTTGGATGAGTTGGGCGTGCC
CCTGTACGCGGTGGTGAAGGAGAATATCAAGAGTGAGGTGAAGGACTTCCAGCCTTACTT
CAAAGGAGATGTCTTCCTGGATGAAAAGGTACATGTGCCGTGAGTGCCTAGGCCCCAGCG
TGGGAGGGACTGTGGCCAGCTCTGGAGGGCTCTGTGGCTAGGGGTGTGGCTGGGCCTGAG
GCTGAAGACTGCTGTCTCCTGCCGTGGCCTTGAATTTCCATGGGCTTTCCCAGCCCTCTG
AGCAGAATATGATGAGACACATGATGAGAAGGTCCCGGACCGGTTCCATCGCGGAATTCC
GTGGAGTGGAGGGCAGGAAAATGCGGCCTTCCCCGAAGTTTCTGTCCCACCCCCAGTATA
CATATAGGGGACCCTGGCAGGAATCCACCGCATCCCTTATTTCATTGCTGCTGTGTTGCT
TCCCCTTCCACTCTGTGTCTGCGATGGGCAGTACTATTCCCACTCTGCCACGCTCAAGAA
CAAGGGAGAACTTGAATCAGAGTGCAAGTTGCAAATCGGCTTCCCTAAGTTGGGTCTGCC
TTGAGGGGCAGAAGCTGGACCTGGCCAGGAGGGTGCTATGTATCCTCCTTGGGCAGTTGT
GAGTGGTCCCGAGGGGCAGCTGTGTGTGTGCTGAGTTGGAGAGAGGACACCAGGCACCAA
GCTAGAACAAAGGCTATGCTGGGACCTCTTTGGGAAAGGCAGGCACAGGTCCTCACATGG
AGTCTGTCTTCCTCACTGCATAGAAAAGGTTCTATGATCCACAAAAGCGGAAGATGATGT
TTATGGGGTTTTTGCGTCTGGGAGTGTGGCATAACCTCTTCCGGGCTTGGAATAGAGGCT
TCTCTGGAAATCTGGAAGGTGAAGGCTTCATCCTTGGAGGAGTCTTTGTGATTGGATCGG
GAAAGCAGGTGAGTTCTGGCTTTTTGGAAAAAATTATCTATCTGCTGCTAGTACAATGGC
TCCATTGGCAAATACTCCACCTGCAAGCAATGGTAGTTTGTGTCCTGGCTACTCCACTTC
ACATCCAACTCCCTGCTTGTGACCTGGGAAAGCAATGGAGAATGGTTCAAAGCGTTGAGA
CCCAGCCACCCACGTGGGAGACCCAGAAGAAGCTCCTAGCTGCTTGCTTTGGATCAGCTT
AGCTCCAGCTATTGTGGCTGTTTGGGGAGTAAACCAGCAGACAGAAGATCTTTCTGTCTT
TCCTGCTCTCTGTTTATCTGCCTTACCAATAAAAACAAATAAATTTTAAAAAATATATCT
ATCTGAAAGGCATGGAGACTAAGATCTTCCCTCTGTTGATCTCACTCCCCTGAGGCCCCG
TAACAGCAAGGACAGCATCCAGCCCATTCCAGGACCAGGAACTCCATCTAGGCCTCCCAT
GGGTGACACTGACCAAAGTAGTTAGGTCATTTCCCACTGCTTGTCCAAGGACGTTAGGGA
ATTGGATCAGAAGTGGCATAGTGGGGACTTACGTGGCATGCACACATGGGATATTGATGG
ACAAACAGTAGCTTGGACATGCTGCACCACACTGCTGGTTTCTGTGGTCTTAGTGTTCAC
TAAGTTTGAGACCCCGATATGGATATTAGAATAAAAAACCCTGACTCCCCAGACATGGCT
GAGAAAGACAGACCATGTCTATGGGCACTTGGAACAAACCAAGTGTACCTAGGAACCACT
GTCACTGAGACAGTCTAAGATTTTGTCTAGAAAATCAGCTGTTTTAGTATAAGGCACCAA
TGACAGTAAGTATTAATACAGATCAGGAAGTATAGTGAATACAGTGTCAAAGGAAGACAT
CAGAAATAATGACCCAAGCCCTCCCTCCTCTTCCTCACATTCCCTGGATGCTTGGCAGAA
ACACTGGGACTCCCCAAGTAGGGAAAGTCAATCCCTGGCCCCGGGTTGCAGCCTCCTGTA
ATAAACCAGCCAGAGACACACTGCTAAGGCATGAAGCAATGGCAGTGAACATGAGCAACC
GCTCCCTGGTGCTGCCCAGAGCCTCTCTTCAGAGGGGATTCCCAGCACCCCTTTCCAGAA
GCTCTTAGACCTGGGAGGGCGCCTGCTCTGGAGGACTGCCCATCTACCTCCTACTCTGGG
ATGTGAGGTTTTTTTCCCTCTTGTGCCACCGCTTTCCTGTGGCCTCTAGGGCAGGGCCTG
GCACACCTGCCAGCCTCCTCTTGCCTGGCGATGCTGACTCACCCGATGTTCATGGGCTTG
GCTGGCACGGACCTAGTGTTGCTAGGTTGTTGTTTGGCTTTATCAGTATCCCCCGGGGCC
CTGGCCTTTTCCCTCCTTGGTGGAAGGTTGACTGGGCTGGCTTGTCAGGACTTAACTCTT
CCTGGGAGCAGTGTTTTCACAACCCCACTGTGCCAGGTGCCATTCAGTAGTGATTTTCTT
TGTAACAATGTATTTTTTTAAGATTTTATTTTTCTATTTGAAAAACAGTTACAGACAGGC
AGAGACAGGTCTTACACCTGCTGATTCACTTCCCCATTTGACTGCAACAGCCAGAGCTGA
GCTGATTCAAAGACAAGAGCTTCTTCTGGGCCTATTTCAAGTGGGTGCAGGGGTCCAAGG
ACTTGAGCCATCTTCCGCTGCTTTCCCAGGCCACAGGCATGGAGCTAGACTAGAAGTAGA
GCAGCCAGGACATGAACTGGTGGCCATGTACAATGCTGACGCTGCAGGTGAAAGCTTAGG
CTACTATGCCATGGCACTAGCTCTTGTAATAATATTTTAAAAAGCATTCTTAATTTAAAG
AAGTATGTGTGCACTACAGAAAATTTGAGGACAGTGGGCAATAGGAAGTGAGGAGAGCAT
TCTTTTTTTTAAAAAGATTTATTTATTTTTATTACAAAGTCAGAGATACAGTGAGGAGAG
ACAGAGAGGAAGATCTTCCATCCGATGATTCACTACCCAAGTGAGTCGCAAGTGCCGGTG
CTGCGCCGATCTGAAGCCGGGAACCTGGAACCTCTTCCGGGTCTCCCACACGGGTGCAGG
GTCCCAAAGCTTTGGGGCGTCCTCAACTGCCTTCCCAGGCCACAAGCAGGGAGCTGGATG
GGAAGTGGAGCTGCCGGAATTAGAAACGGCACCCATATGGGATCCTGGTGCGTTCAAGGC
GAGGGCTTTAGCCACTAGGCCACGTTGCCGGGCCCAAGGAGAGCATTCTTTATGGACAAC
CTAAAGGAGCAGCTCTGAGGCCTTCTGTTAGAAAGTGGTATCTTGCAAAGCTAGTTTTGT
TTGTTTGTTTGTTTTTTGTTTTTTCCATTCTGAACTGTATCGTGGGCATTTTCTCATATT
ATCATATATTCCTTAATGTTTTTATTCCACATTATGTTTTATTGATATCTTCCCCGTAGT
TACCACGCCATGGTGGGGACTTTTTATTTCTTTATTTATTTTAGGCAATGACACAGTATA
TTTAGATTTTTCTTTTTGAGTTCCTGGAGGTCATGGTCCAAGAAGTCTTTGCTCGGATTC
CTTGAGGCCAAGCTCTCGTGCAGTATTTTTTCATTTTTACCACTTTAGTGGAATGTAGGA
GTAGCCTGCATCGCAGTGCAGAACTGAGTGGCCTGTGGTTTCTCAGGAAGACAAGGAAAG
GCCTCTCTTTTCAAAAGGGTGTCTGGGACCTGACGCCTGAGCTGCCCTTGCATGTCCTCA
GACTTTTTGTGTGCCCTTCCTTCTAAAGTATTCATCCACCTGCAGCTTCACCTTTGTAAA
CCTCATGGTTGTCCTTCCTGCTTTATCAGCTGTGAAGCCTGCCTTTAAATGTCCTTGTCA
GTTACTCATATCTGACTTGCTGCTCAGCAATGCTGTATGCTCAGCCCTGACATTGTTCCT
GTGTGCAGCCTTGATACTGTATCCTGTGCGCAGCCCTGACACTGTGCTCTATGCACAGCC
CAGATACTGTGTCTTGGTCTTTCCTGGACCTCCTTTCCCCCAAAGCTGAATACTGTGGGT
AGGAGGCAAGCCAGATGCAGACCTGTGGTGTCTGCTGCCCATGGCTTGATGGCGTCTGTG
CCTAGAGGGGGCATCAGAGAGCCAGGAGGACTGACACTCTTCCTTGTTTCCTTGCAGGGC
ATTCTCCTGGAGCACAAAGAGAAGGAATTTGGAGACAAAGTAAACCTATCTTCTGTGCTG
GAAGCAGCCAGGAAGATCAGATCACAGGCTTCCGCCTCAGAGAACAAG
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