SelenoDB
Release 2.0
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Transcript Report for SPT00001779_2.0
Identity
TranscriptSelenoprotein U2 (SelU2)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001779
Transcript release2.0
External IDNone
Gene SPG00001684_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001779_2.0 # Transcript # Selenoprotein U2 (SelU2) # Pika (Ochotona princeps) # Full length # Forward
TCCCTCCTAAAGGAAGCAGATGTCACCCTTATACTGATTGGACAGTCATCCTACCATCAT
ATTGAGGTAAATCTAGCAGATTGGGAATGAACCCTTTGACTCTATTGCAGATATTTTAAA
AAAAAATCACATCTTTTGAGCCACTGAGTATATTAAGTTGGCCGGTTAGATTATCATAAA
TTGTCAACTATTCCCCTCTCCTCAGCCGTTCTGCAAACTAACTGGATATTCTCATGAAAT
CTATGTGGATCCTGAGAGAGAAATTTATAAAAGACTGGGAATGAAAAGAGGTGAAGAAGT
TTCCTCCTCAGGTAAGATAGAGTGTGTCCCAAGCAGAAAATGCTGGCGGTGTGTTTTTGT
ATTGATATAATGACATCATACAGCTATATATCTGTCTCCCAGGAAACTAAATGACAGCTT
CATTCATAAATATGTTTCTGTCAGTGGTCCAATCACCCTGGACTTAAGAGACTGATCATC
TGGGTGTAATGACTTAAAAAAGCCATCGGCAGAGCACTGTTGAATGCAGAAAGCAAGTTG
GAGAACATTGCTTTCAGTATGACTTCATTGTGAAATCAAAAAAGATTTTTTCTAAGATTT
AAAAATTTTTTTATCGGAAAGTCAGATATACAGAGAGAAGGAGAGACAGAGAGGAAGATC
TTCCATTCAATGGTTTACTCACCAAGTGGCCGCTATGGCCAGAACTGAGCCGATCCGAAG
GCAGAAGGCCAGAGCTTCTTCCAAGTTTCCCATATGGGTGCAGGGTCCCAAGGCTTTGGA
CCGTCCTCGACTGCTTTCCTCAGGCCACAAGCAGGGAGCTGGATGGGAAGCGGGGCCACC
GGGATTAGAACTGGCACCCATATGGGATCCTGGCGCATGCAAGGAGAGGACTTTAGCCAA
TAGATTACTGCGCCGGGCCCCTGCTATACTATCTTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCGGCACTGTGGTTAGAGGCACGGGTGGGAGAGCTCAGGAAGC
CATGTGCCTGCACTGTCTGGTCCTGCCTTCGCACTCCCCAACACCTCCTCTTCCCCCAGG
ACTTCCTGGGCACTTCCAAGTCCAGGACCAGTGGTAGCCTGCAGAGGTCTTCAGGACACA
CATGGTTTCTGACAGGAGACGCTGAAACAGCCCTTATTTTTAACTTGCTATCTTTTTTTA
ATATATATATCACATGCTGAAAATGGAATAAATACATTCTTTAGTTTCAGTGTGCTGTGT
GAAAACAGAAGCATGTTGATGCCCTTAAAAATCTAAAACTTCACAGTGTGAAAAAAAAAA
GGCTACAGAGGTTCCTAAACTTCCCTGCGCCCACTTATCCCACGTAGAAGTCCACGAGGA
ATTCTACAAAAGCTAAAGCCAGGCTTTCCACCTCCGCCTCCTTTCCTGTGGCTGTCCTCG
TACCCTGCCCGGCAAAACACACACACACACACACACACACACACACACACACACACACAC
GGACACGCACTCATGGGGGGAGAGACACATGGGTGATTTCACACGAATGGACACACACAG
CTGGTCAGTCCGATGCCAGGAGCTTCTCCAAGAACTTGGACCATCCTCTCAAAAAACTCA
AAAACACTCCAGCACGAGCAGATGGACTCCAGTGTGGACACTGGAGGAGGAGGAGGGCGT
GCCTCCCGCGGAACACTCCCATCTTCCTCCACAGCCCTGGCGCTGGTGCTCCGGTCACCT
CTGAGACTAACCACCCATCAACGCCATCTTTGAGTCCTCTGACGCCCACGCCACGCCCCG
CCTCAGCATGCCACGCCCCGCCCACATCACCCCGGTCGCCCACAAAATACAAATTAAAAA
AATTTGGAAGGTCGAGCAGCGGGTATATAGGGTTGCAATGGAAAGGAGGGGGAAGAGGAG
CCGGCACACCCACTGCCAGGGCAGCGCGCACGTGGTAAGTAGTACGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTAACCGATGTGCTGGGTTTCTACTACCTTCCCT
CAAGATGGCCGCAAATTACCCGGTACCCAGCAGATCGTCGGCGGGGCAACCCCAGTCGCG
ACACCGACCGGCCCCGAGCGCGGGCAGCCCTGGCGGCCGCCGTGGCCGAGCTGCCGGTGC
TCGACGCGCGCGGGAGGCGGGTGCCGTTCGGCGCCCTGTTCCGGGAGCGGCGGGCCGTGG
TGGTCTTCGTGCGGGTGAGCGCGGGCCACCGGCGGCGCATCGCGGGGTCGCGCGCGGGAG
CTTTCGGGGTTGCGCGCCGCCCGGGACAGTGCTGAGGCCAGCCGGAGCACAGCCCCCTCC
CCCCCGGGCCGAGGCTGCTGTGTCGCTGAGCCTGGGGGGTGGGCAGCACCTCGGGCCGCC
TGGCCTGCTCCGCTCCCGGGCGTGGCCCTCGGCGCGCCTGCCTAACTTGCGCTCCTGCCT
CGTTGGGTCTCAGCATTTCCTGTGTTACATCTGCAAGGAATACGTGGAAGACCTGGCCAA
AATCCCCAAAAGCTTCCTGCAGGTGAGTGTCCTGGGCACGGGCGGCAGCACCCCAGGGCC
ACCTCGTGGAGGAAGGCCCCTGTTGCCTCCGGCCACTTGGCGAAACCAGCAGACACCTCG
CTGATCATTTCTGGTCCCGTTCGTTCCTTGCCGCCGCTTAACGGTAACCTGCGTATTGTC
AGATGTTGGATGCCAGTCGCCAAAAGCAAACGACAGCACTGAGGTCTCCCTGCAACAGCT
GTCCCTTACGCCGTCTGTTCCCTTAGCTAAAGGACCGCACGGTCCACCTGCTAGGGCAGC
CACAAATGCATCTTTCTTCAGCCTTCAACGGGTTTGTGGTCCAAGCGGGCCTTTTCCATG
GAGGCACTGGGCAGGCTTTATCAAATTAGGACCTGTTTTCAGCCGGGCTTGTCCAATCAG
GACCAGAGAAAAAAGTGAGGTGGTGGTGATGAAGTTAGCTAACAGCTAAACTTCCTGTTT
TTTAAAATTGCGTTTTGCGAGTGGGGAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAATCTGTCCACTGGGTCATCCCA
CAAGTCGTTAGAGTGGCCAGAGCAGAGCCGTTCTGAAGCTAGGAGCTTCTTCCGGGCCGC
CCATGTGTTGCAGGGGCACAAGTACTTGGGGGTCTCCTTTGCTGTCCTCCCAGGTAGGTT
AGCAGGGAGCTGAATTGAAAGTGGAGCAGCTAGAACTTGAGCCAATGCTGACATGCCACG
TCAGCACCACAAGCAAGGGCCTTACCCTCTAAGCCACATGCTGCCCCCACCAAAAAAATG
TTTTAAAGGATGTAACTAGCTGTTAGTTGTAACTAGCTGTTAGCAGTAATTAGCTGTTAG
TAGTAACTAGCTGTTACTAGACTAAGAAAAACACAGCTGGGGAATTCAACTGGGAAGCGC
TAGCAAGCTGAGAATTGTGCAGCTGATGTTTTCTCTGAGGCAGAAATGCGGCAAAGTCCC
CATCACTCTCCCCTGGGACTACTGTCTCCCTGCCCCCCCCCGACACTTGGCATTGTCTGG
AGACAGTGTGGCTGTTGGCATTTAGTGATGCCATACATACATGGTGTTGCGCAGGGCAAA
GAATCGACTGAGCCAACATGTTGGGAATGAAAGAGGAATAGAAAGCAACATGGACACTCT
AAAGGATTTCTTTTTCCAAACCTGGAGCCAGGCCTACCACAGTAATAGCTCTAGACGGTT
CTCTGCATTTCAGGCCAGAGCCCCCACATAAAGTCCAGCCTCCTCTCGGGCAGCCTCCAG
AGCCTGTGGCGGGCGGTGACGGGACCGCTGTTCGACTTCCAAGGCGACCCGGCCCAGCAA
GGCGGAACCCTCATTGTGGGTCCAGGTAAGAGGCCAAGAAAGCCGAGGCTGGGCAGCACG
CCTGTGGCTTGTGCATGTCCCCAGGCCACTGTGCTCACGTGGCGGAGGACACCTTGGTGT
GCAGGTGATCGGAAGGAAGCTGTGCTTTTGTTTGAAGATTTTATTTGAATGGCAGAGTTA
GAGACAAGGAGATCTTCCATCTGCTGGTTCACTTCCCCAAATGGTCACACCAGCTAGGAC
TGGGCCAAGGACAGGAGCCAGGAGCTGCCTCCTAGTCCCCAGTGTGGCTGCAGAAGTTCA
AGGACTTGGACCATCCTCCACTGCTTGTGCAGGCCGCATTAGCACGAAGCTGGACCAGAA
GTGGAGAAGCCGGGACTTGAACTGGCACCCATATAAGGAGCTGATATGGCACCAGTAAGT
TTACCTGCTATGCCACAGCACCAGCCCCAATGATTAAAAAAAGTTTTATTTATTGTTATT
GGAAAGTCAGATTTACAAAGTGAAGGAGTCATAGAGGAAGATCTTCCATCCGCTGGTTCA
CTCCCCAAGTAGCCACAATGGTCGATGCTGAGCCAATTTGAAACCCAATCCAGGAGCTTC
TTTTGGGATCTTCCATGTGGATGCAGGGTCCCAAGGCTTTGGACCATCCTCAACTACTTT
TCCAGGCCACAAGCAGGGAGCTGGATGGGAAGTGGAGCAGCTGGGACACGAATCGGTGCC
CATATGGGATCCTGGGCATGCAAGGCGAGGATGTTAGCCACTAGGCTGTGGCGCCAGGCC
CCAGCCCCAGCCCCAGCGATTATTTTTTTTTATTTGAACAGATCCAAGGATTGTAGATAA
CTAAGTATATTGTAATGGATTACCTTAATGTTGTACAGATGGCCTAATTAAATCAGTACT
GAAGTGAGTTATTGATTCCATTATTATATATGTTTATGAAATGTGATTCTTTGGCTCAAT
GTTTGTGCTACTTCTGTATTTCTGCCTGCCTGACGAGACATTTTATTTGCTTATAGTTAA
TAAGCTCTAACAAAAGGTTATAATTTAAGGATCTTTCCTCTTGGATCTCATAAACCATTA
AGTGTGGCTCTGATTTAACCATAATCCCTGTCATAGTTTATTACCATAATTAAAGATGAT
CATGGCATTACACAGAGAACATGATGGGTCCCAGGTAATTAATTTTTCCCTTTGGACTAG
TTTAAAGTTGAAAAGCTTCCTTGACTCCAGAGAGCCACACGTCAAGTGAATCCCTCGTGT
GTAACACACACACCTGAACCTTTCCTTCTCTTCCAGGTAACAACATCCATTTCATACACC
TCGACAGGAACAGGCTGGACCACAAGCCCATCAACTCTGTTCTGCAGCTGGTGGGAGTTC
AGCACGTGAACTTCANN
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