SelenoDB
Release 2.0
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Transcript Report for SPT00001779_2.0
Identity
TranscriptSelenoprotein U2 (SelU2)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001779
Transcript release2.0
External IDNone
Gene SPG00001684_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001779_2.0 # Transcript # Selenoprotein U2 (SelU2) # Pika (Ochotona princeps) # Full length # Reverse
NNTGAAGTTCACGTGCTGAACTCCCACCAGCTGCAGAACAGAGTTGATGGGCTTGTGGTC
CAGCCTGTTCCTGTCGAGGTGTATGAAATGGATGTTGTTACCTGGAAGAGAAGGAAAGGT
TCAGGTGTGTGTGTTACACACGAGGGATTCACTTGACGTGTGGCTCTCTGGAGTCAAGGA
AGCTTTTCAACTTTAAACTAGTCCAAAGGGAAAAATTAATTACCTGGGACCCATCATGTT
CTCTGTGTAATGCCATGATCATCTTTAATTATGGTAATAAACTATGACAGGGATTATGGT
TAAATCAGAGCCACACTTAATGGTTTATGAGATCCAAGAGGAAAGATCCTTAAATTATAA
CCTTTTGTTAGAGCTTATTAACTATAAGCAAATAAAATGTCTCGTCAGGCAGGCAGAAAT
ACAGAAGTAGCACAAACATTGAGCCAAAGAATCACATTTCATAAACATATATAATAATGG
AATCAATAACTCACTTCAGTACTGATTTAATTAGGCCATCTGTACAACATTAAGGTAATC
CATTACAATATACTTAGTTATCTACAATCCTTGGATCTGTTCAAATAAAAAAAAATAATC
GCTGGGGCTGGGGCTGGGGCCTGGCGCCACAGCCTAGTGGCTAACATCCTCGCCTTGCAT
GCCCAGGATCCCATATGGGCACCGATTCGTGTCCCAGCTGCTCCACTTCCCATCCAGCTC
CCTGCTTGTGGCCTGGAAAAGTAGTTGAGGATGGTCCAAAGCCTTGGGACCCTGCATCCA
CATGGAAGATCCCAAAAGAAGCTCCTGGATTGGGTTTCAAATTGGCTCAGCATCGACCAT
TGTGGCTACTTGGGGAGTGAACCAGCGGATGGAAGATCTTCCTCTATGACTCCTTCACTT
TGTAAATCTGACTTTCCAATAACAATAAATAAAACTTTTTTTAATCATTGGGGCTGGTGC
TGTGGCATAGCAGGTAAACTTACTGGTGCCATATCAGCTCCTTATATGGGTGCCAGTTCA
AGTCCCGGCTTCTCCACTTCTGGTCCAGCTTCGTGCTAATGCGGCCTGCACAAGCAGTGG
AGGATGGTCCAAGTCCTTGAACTTCTGCAGCCACACTGGGGACTAGGAGGCAGCTCCTGG
CTCCTGTCCTTGGCCCAGTCCTAGCTGGTGTGACCATTTGGGGAAGTGAACCAGCAGATG
GAAGATCTCCTTGTCTCTAACTCTGCCATTCAAATAAAATCTTCAAACAAAAGCACAGCT
TCCTTCCGATCACCTGCACACCAAGGTGTCCTCCGCCACGTGAGCACAGTGGCCTGGGGA
CATGCACAAGCCACAGGCGTGCTGCCCAGCCTCGGCTTTCTTGGCCTCTTACCTGGACCC
ACAATGAGGGTTCCGCCTTGCTGGGCCGGGTCGCCTTGGAAGTCGAACAGCGGTCCCGTC
ACCGCCCGCCACAGGCTCTGGAGGCTGCCCGAGAGGAGGCTGGACTTTATGTGGGGGCTC
TGGCCTGAAATGCAGAGAACCGTCTAGAGCTATTACTGTGGTAGGCCTGGCTCCAGGTTT
GGAAAAAGAAATCCTTTAGAGTGTCCATGTTGCTTTCTATTCCTCTTTCATTCCCAACAT
GTTGGCTCAGTCGATTCTTTGCCCTGCGCAACACCATGTATGTATGGCATCACTAAATGC
CAACAGCCACACTGTCTCCAGACAATGCCAAGTGTCGGGGGGGGGCAGGGAGACAGTAGT
CCCAGGGGAGAGTGATGGGGACTTTGCCGCATTTCTGCCTCAGAGAAAACATCAGCTGCA
CAATTCTCAGCTTGCTAGCGCTTCCCAGTTGAATTCCCCAGCTGTGTTTTTCTTAGTCTA
GTAACAGCTAGTTACTACTAACAGCTAATTACTGCTAACAGCTAGTTACAACTAACAGCT
AGTTACATCCTTTAAAACATTTTTTTGGTGGGGGCAGCATGTGGCTTAGAGGGTAAGGCC
CTTGCTTGTGGTGCTGACGTGGCATGTCAGCATTGGCTCAAGTTCTAGCTGCTCCACTTT
CAATTCAGCTCCCTGCTAACCTACCTGGGAGGACAGCAAAGGAGACCCCCAAGTACTTGT
GCCCCTGCAACACATGGGCGGCCCGGAAGAAGCTCCTAGCTTCAGAACGGCTCTGCTCTG
GCCACTCTAACGACTTGTGGGATGACCCAGTGGACAGATTCTCTCTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTCCCCACTCG
CAAAACGCAATTTTAAAAAACAGGAAGTTTAGCTGTTAGCTAACTTCATCACCACCACCT
CACTTTTTTCTCTGGTCCTGATTGGACAAGCCCGGCTGAAAACAGGTCCTAATTTGATAA
AGCCTGCCCAGTGCCTCCATGGAAAAGGCCCGCTTGGACCACAAACCCGTTGAAGGCTGA
AGAAAGATGCATTTGTGGCTGCCCTAGCAGGTGGACCGTGCGGTCCTTTAGCTAAGGGAA
CAGACGGCGTAAGGGACAGCTGTTGCAGGGAGACCTCAGTGCTGTCGTTTGCTTTTGGCG
ACTGGCATCCAACATCTGACAATACGCAGGTTACCGTTAAGCGGCGGCAAGGAACGAACG
GGACCAGAAATGATCAGCGAGGTGTCTGCTGGTTTCGCCAAGTGGCCGGAGGCAACAGGG
GCCTTCCTCCACGAGGTGGCCCTGGGGTGCTGCCGCCCGTGCCCAGGACACTCACCTGCA
GGAAGCTTTTGGGGATTTTGGCCAGGTCTTCCACGTATTCCTTGCAGATGTAACACAGGA
AATGCTGAGACCCAACGAGGCAGGAGCGCAAGTTAGGCAGGCGCGCCGAGGGCCACGCCC
GGGAGCGGAGCAGGCCAGGCGGCCCGAGGTGCTGCCCACCCCCCAGGCTCAGCGACACAG
CAGCCTCGGCCCGGGGGGGAGGGGGCTGTGCTCCGGCTGGCCTCAGCACTGTCCCGGGCG
GCGCGCAACCCCGAAAGCTCCCGCGCGCGACCCCGCGATGCGCCGCCGGTGGCCCGCGCT
CACCCGCACGAAGACCACCACGGCCCGCCGCTCCCGGAACAGGGCGCCGAACGGCACCCG
CCTCCCGCGCGCGTCGAGCACCGGCAGCTCGGCCACGGCGGCCGCCAGGGCTGCCCGCGC
TCGGGGCCGGTCGGTGTCGCGACTGGGGTTGCCCCGCCGACGATCTGCTGGGTACCGGGT
AATTTGCGGCCATCTTGAGGGAAGGTAGTAGAAACCCAGCACATCGGTTANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTACTACTTACCACGTGCGCGCTGCCCT
GGCAGTGGGTGTGCCGGCTCCTCTTCCCCCTCCTTTCCATTGCAACCCTATATACCCGCT
GCTCGACCTTCCAAATTTTTTTAATTTGTATTTTGTGGGCGACCGGGGTGATGTGGGCGG
GGCGTGGCATGCTGAGGCGGGGCGTGGCGTGGGCGTCAGAGGACTCAAAGATGGCGTTGA
TGGGTGGTTAGTCTCAGAGGTGACCGGAGCACCAGCGCCAGGGCTGTGGAGGAAGATGGG
AGTGTTCCGCGGGAGGCACGCCCTCCTCCTCCTCCAGTGTCCACACTGGAGTCCATCTGC
TCGTGCTGGAGTGTTTTTGAGTTTTTTGAGAGGATGGTCCAAGTTCTTGGAGAAGCTCCT
GGCATCGGACTGACCAGCTGTGTGTGTCCATTCGTGTGAAATCACCCATGTGTCTCTCCC
CCCATGAGTGCGTGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TTTTGCCGGGCAGGGTACGAGGACAGCCACAGGAAAGGAGGCGGAGGTGGAAAGCCTGGC
TTTAGCTTTTGTAGAATTCCTCGTGGACTTCTACGTGGGATAAGTGGGCGCAGGGAAGTT
TAGGAACCTCTGTAGCCTTTTTTTTTTCACACTGTGAAGTTTTAGATTTTTAAGGGCATC
AACATGCTTCTGTTTTCACACAGCACACTGAAACTAAAGAATGTATTTATTCCATTTTCA
GCATGTGATATATATATTAAAAAAAGATAGCAAGTTAAAAATAAGGGCTGTTTCAGCGTC
TCCTGTCAGAAACCATGTGTGTCCTGAAGACCTCTGCAGGCTACCACTGGTCCTGGACTT
GGAAGTGCCCAGGAAGTCCTGGGGGAAGAGGAGGTGTTGGGGAGTGCGAAGGCAGGACCA
GACAGTGCAGGCACATGGCTTCCTGAGCTCTCCCACCCGTGCCTCTAACCACAGTGCCGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGATAGTATAGCAGGGG
CCCGGCGCAGTAATCTATTGGCTAAAGTCCTCTCCTTGCATGCGCCAGGATCCCATATGG
GTGCCAGTTCTAATCCCGGTGGCCCCGCTTCCCATCCAGCTCCCTGCTTGTGGCCTGAGG
AAAGCAGTCGAGGACGGTCCAAAGCCTTGGGACCCTGCACCCATATGGGAAACTTGGAAG
AAGCTCTGGCCTTCTGCCTTCGGATCGGCTCAGTTCTGGCCATAGCGGCCACTTGGTGAG
TAAACCATTGAATGGAAGATCTTCCTCTCTGTCTCTCCTTCTCTCTGTATATCTGACTTT
CCGATAAAAAAATTTTTAAATCTTAGAAAAAATCTTTTTTGATTTCACAATGAAGTCATA
CTGAAAGCAATGTTCTCCAACTTGCTTTCTGCATTCAACAGTGCTCTGCCGATGGCTTTT
TTAAGTCATTACACCCAGATGATCAGTCTCTTAAGTCCAGGGTGATTGGACCACTGACAG
AAACATATTTATGAATGAAGCTGTCATTTAGTTTCCTGGGAGACAGATATATAGCTGTAT
GATGTCATTATATCAATACAAAAACACACCGCCAGCATTTTCTGCTTGGGACACACTCTA
TCTTACCTGAGGAGGAAACTTCTTCACCTCTTTTCATTCCCAGTCTTTTATAAATTTCTC
TCTCAGGATCCACATAGATTTCATGAGAATATCCAGTTAGTTTGCAGAACGGCTGAGGAG
AGGGGAATAGTTGACAATTTATGATAATCTAACCGGCCAACTTAATATACTCAGTGGCTC
AAAAGATGTGATTTTTTTTTAAAATATCTGCAATAGAGTCAAAGGGTTCATTCCCAATCT
GCTAGATTTACCTCAATATGATGGTAGGATGACTGTCCAATCAGTATAAGGGTGACATCT
GCTTCCTTTAGGAGGGA
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