SelenoDB
Release 2.0
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Transcript Report for SPT00001820_2.0
Identity
TranscriptSelenoprotein J (SelJ)
SpeciesOreochromis niloticus (Tilapia)
Transcript IDSPT00001820
Transcript release2.0
External IDNone
Gene SPG00001725_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001820_2.0 # Transcript # Selenoprotein J (SelJ) # Tilapia (Oreochromis niloticus) # Full length # Forward
ATGGCTTCAGCTCTGGCTAACAGGGCAATAGGAGCCATCGTGGGATCAGCAGTGGCAGAT
GCTGCAGGTATTAATAGTGTCACACTAATTTTACATTGATGATCTATGAAAGTAATCATG
CTTGTGTTAAATAACTGGAAAGACAGTCTTTATAGGGGACTAAAATGCCGTCCTGTGAAA
CACTCAATACCACCATACTACTTCCATGGCAGGGTTAGTTTAGTGGTGCACCTGATTAAT
TGATCATCACAAGTGTGAGCACCTCAGGCACCTCAAAACTGGATCATGCAACAAGACAAT
GATCCAAGGACAGCAGCAAATCTCTTTAAAAAAAAAAAAATCGCTGGAAAAATAAAAGAA
TCAACGTGTTGCGATGGGCCAGTCAAAGTCCAGACCTCACCCTGATTGCAATTCGATTAT
GGGACCTTAAGAGAGCTGTGCATAAATGAAAACAGACATCAATGAACTAAATCAATGTTG
TAAAGAAGAGTGGGGCAGATTTCTTCCACAACAATGTGAGAGATTGATAAACTCTGTTGC
CTGTCAAAACTGTCAAGACTATAACTTTTGAGCTGTCATAAGGTTAGCAGGTATCTTTCA
GCTGAGGTGAGAGCTTCCTGGTTTGAGTTGAGTACACAGATCTTCAGGTTGTACGAGTGG
AAGTGGATTTTCAGTCCTTTCTTATTTTTAACACATCTCCTTAGGTTTTGAGTAATGTCA
AGGTTCAGAGTGTAATTATCTTGTCTCTTGCAGCACAGCCTCTCCACTGGGTGTACGACC
TCCAGAAGTTAAAGGGGATCCTGGCTCTGAATCCAAACCCGGAATTCCACCCTGAGTCCG
CTAACCCTTTTTACAGGAGGGAGACTGGCAAGCAGAGTTGCTATGGAGACCAGGCATATG
TCCTGCTGGAGTCCCTGTCTGAATGTGGAGGTAGTGCTGCTGACTTTATCACTAAAATTA
AACTAAACTTACATTTCTAGAGGTCATAGTAGGTTTCAGATTACTACTATTTACAGCAAG
CGAAGTTATGCAGTTGATTCAGTTTGTTGTCAATAGAATTATTGATAAAGTTATGGATGG
ATTTGCTTTAAATTCTACCAGAAGTAGCACTTGGTCCAACATAAAGGGATTAACTACAAC
TGGACCCATGAAATTGCCTCATATCTTTACAAGTGATATAAGGAAAATATAAGAAAGTGG
GCTGTCCTCAAAGAAATATTACACGTTACTCTAGATCCACATATTCTGCATGCAGGGACT
GGGTTCGTGCAGTGTGTAGGGAATTTTCACACACTGTCTAAGATGCCTGATCTCTCTGAC
CAGGTCTAAACGTTGATGACCTGAAGCAGCGCACACTGAAAGTTTTTGGGCCAGGATCAG
AGTATGACACGCCCGTCAATGATCCTTACAGAGAGAGGGGAGGTAAGAGAAATCTTGGAG
ATATCCCTGAGGTCCGTTACCTTTTTGACAAAATATGCAATTTGGACTTGTGCAGGGCCA
AGACCTCAGCTGCCCATCGATGGGCCGTGGAGACATGCAAGTTTAAAGAGCTTCCTGAAG
AATGTGGATGCAGGCAAAGAGGAGACGGGTAAAGTTTCTGAACTTATTCACAGCTTGACA
TTATGAAGAGAAATATCTCTAACCTAAACCTGTGCTGCTTTCCTTCAGGCTGTGAGAACG
ACTGTCAGATTGATGGAATAGCCAAACTGGCTCCTATAGTGGCTTTTTATGCAGGACAGC
CTGACATGCTGGAGAAGGTGGAACAGGCCATCCGTGTCACCCAGAACAATGATGAATGTG
TGGCGGAGACTCTAGCAGCAGCGAGGTCAGGACATCTTCCAGGCACACCAGTTTCACTTG
TTTACACATATTGGATGTGAGAATTGGCTAATTAAGGGTTATTAATAACAACTTTGTTTT
TAACCTGGAAACCACAATAGACTATTAGATCTGGTAATTAAAATTGGGCATAATAAGAAG
TATTTGGAGCAGAGAGTATAAAAATAGGGAAGAGAACACGTTTCACATTTTAATAAACTG
ATCAGCCACATGAAAGCTGATTGTCTCTAAAGATCGTTCCAGTTTGGCTGCATGGTTGAT
TACATCTTTCTCTGTAGTGAGGCAAAATCAGAACGCATATTTAATACTGTTCTACAAAGA
TGTATAAAGAAAAACATAAAACGGAAATGTTCCACACTGACTTCTTTTCCCAGGTTTCTG
GAACATTTCATCCTGAATGGTCCAGATCCAAAAGCCTTGGACGCGGTGCTCAATCAGCTT
AATGACCCAAACAGAAAGCAGCCTCAAGATTTAGACAAAGCAGTCATCGGTACGTGAGGC
CAGCAGCATATTTCCTTCCCTGTGTTAAAGTCATGAGACCGACTCATGTGATCAAAGAGT
TTATTTTACCTTATTCTCTGAAGGTTCAGTTCCAATGTGACATAACGATGATAGGATAAA
GAGATATGCAGAGAGTTATGTTTAGTATTTCTGTTAACATCTCATCTTATGTTTGACTCA
CTACTGCACCCTCTCTGCCTGATTTCAGGACACATCCACCAGGTGAAGGAGAATTTATCC
AAAACTCCGCAAAAGCTGATCCCCTCTGTCTTCACAAATGCATGAGGTATCTTTGATAAG
CTCCCTCAACCTCTGACATCAGTGTAGTCCTTAACAGTAACATGTGGTATAAGAGCACTA
TGTGTAATTTGGATAGCTGTGAGACAAACCAGGAAAAATGCCTTCATGCCATTCACATCT
GCCTCTGATGTTTCAGGTTTGCCGGGTGCGTTCCAAGCCGCGCTGCACGGAGTCCTGACA
GCCACTCGCTATGAGACGGCTGTCAAAGACACCATGAGCTGCGGGGGATGCACCTGCAGC
AGAGGATCCTTCATAGGAGCCTGTCTTGGGGCTCAGGTGGGGCTGCCTGTTAATCTAATA
TATTCACGTGCACATGTTTTAAGTTTGATTTATTAAATGTTCTGTTCTCATTCTTCTAGG
TCGGACTTGAGGGAATCCCGGAGTCCTGGAAGTCCAAGACCCTGCAATACGACTTGGTGT
TGGAGCATGCCAAGAAGATAACCAAACACCTGTCGGCGTAATGCCTTTTAAGAAGGCTTA
GAGAGAACAGTGTGACAAACTGTCGAGCTTTGACAGAACAGCGAATGATGGTTCCTGTTT
AAACGTTTGGACGGCAGGAGCCAGATGTTTTTGTTTCTGTTAA
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