SelenoDB
Release 2.0
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Transcript Report for SPT00001827_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesOreochromis niloticus (Tilapia)
Transcript IDSPT00001827
Transcript release2.0
External IDNone
Gene SPG00001732_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001827_2.0 # Transcript # Selenoprotein O (SelO) # Tilapia (Oreochromis niloticus) # Full length # Forward
ATGGAGTCTGCTGAGCGTCTTCCATCTGTTCTGGGGCGCTTACCTTTCAAAAACACCGTA
CTGAAAAAACTACCAATAGATGACTCGGAACAACCCGGGTCTCGGATGGTGCCAGAGGCT
TGTTTCTCCCGAATTCGGGCTCTCCAACCGCTGGTCCGACCTGTTTTTGTGGCACTATCC
CAGACAGCACTCTCTCTATTGGGCCTGAGTGCGCAGGAGGTGCTCAGCGATCCTCTGGGT
CCGGAGTATTTGAGCGGCTCCAGGCTGTTGCCGGGCTCCGAGCCAGCAGCGCACTGCTAC
AGCGGGCACCAGTTCGGGCTGTTTGCGGCTCAGCTCGGAGATGGGGCTGTGATGTATCTC
GGGGAAGTGGAGTCTTGTGCACACGGGAGATGGGAGATTCAGGTGAAAGGCGCAGGAGTC
ACACCTTACTCCAGGTATTGTTTGCTTCCCTTAAGCTCCTAGGACCTGGTGTCCACATAT
ATGGACATCACATTTTGGGTTGTCTAGACCAAAATACTAAATTTTGCTCTACAAGAGTTC
AGGTCTTAAGAGGTTAATGAACACGTGAATAATCTGTTTTCAAACATTATACAGACTCAT
CTCATGGACAAAGTTGATATTTATACATCCGGGACAGTTTTTCCTCTTGCTAAATGATAA
AGAAGGTCACTTCAGTAAGTGACATAGCAAACATTAGTATAGCTCACATGAAAGCCTTCA
CTCGGGCAGAGCTGCTTAAGAGATTAACTGCCTGGCACACATTAAATGCTGCTCAATAGC
TGTGTGCCTGGTACAAATAAACGCATCCAGCCTCTCCAGCTTATTTGATTAGTGTAGGGG
TGTTCAATTAAAAGTTAAGGAGGTTAAGCAAAGAAAGTTTCCTCTAACAGAGGTCCAAAA
TATCATACTATTCCAAAAGCGTTATATGCACAGCAAACATCTGACTGTCAACTAAAAGAA
AGAAAGTAGCTATAATTCAGCAGTCTTGCAATCCATTATTTATTATTATTTTCACACTGA
CGTGGGGGTAAAGAGCTTTTGAAAAGGTTTTTTTCAAATTAAAAATAAATCAGTAAATAA
ATAACGAAAGGATCAATCTTTCCTAAGCACATTTCAAGCAAATTTTTTTCCCATGGCTTC
CCAGTGGATGAAGTTAGCTAAAAAAAAATCTGCTTTAAGGACCATTGGATGCAGCTGAAG
TTAAGGGGAAAACCCCTCTCAGATTATAAGAATTGTGCTAGTATTATAACTTGATTGTAA
TTGATCATAAATTATCTCAGCCTTTGTTTGAGTTGCTAAAATAGCTTGGTCACTTGACAG
TTACTGAGAGCTGAATAATCTGACATATATATTTGGATTTTCTCAGAGACGGCGATGGCA
GGAAGGTGCTGCGCTCCAGCATCAGAGAGTTCCTTTGCAGCGAGGCCATGGCTGCCTTAG
GGATACCCAGCACTCGTGCAGCATCCCTTGTCACCTCTGACCTTTATGTCAGCAGAGATC
CACTCAACAATGGCCAACGCATTCTTGAGCGCTGCTCAGTTGTCCTTCGTGTCGCTCCTA
CATTCATCAGGTTGCCACACAGGAAGCAGTATAGAGAGAAAAATATAAGTAATAATGGTG
TTTTTAAAAAACAGATGCTATCATGGCTCTTTCTCTTCTTTTTTTTTTCTTTTTTGAAGG
TTTGGCTCTTTTGAGATCTTTCTGGGCCGAGATGAATTCTCAGGTCTGCAGGGCCCTAGT
GCCGGGCGGGATGATATCCGTGCTCAGCTGCTGGATTATATTGGTGACACTTTTTATCCT
CAAATTCAGCAGGCTCACAGCATCCGGAAAGACAGGAATTTGGCTTTTTTCAGAGAGGTG
ACTAACAAAAATGTCACATGTTTTACTCTCTGTTTAGGTTGGTTCATTCCATGCTGGTGT
GTCGATTTTCAGTTTCTTCTTGTTTATTTTCAGGTGATGACGCGAACTGCTAGGCTAGTG
GCCCAGTGGCAGTGTGTTGGCTTTTGCCATGGTGTCCTTAACACAGACAACATGAGCATC
CTGGGTCTTACCCTGGACTATGGCCCCTTTGGCTTCATGGAGAGGTATGCAGCGGGAAGT
AGAAGCCTTACGGTCTAACTATGCAGTGTTTGGAGACATAGTAACTGAAAATTACATTCT
GTGCTTGTATTATATGATACATGATGACCGTCTTTCTGTGTGTCAGATTTGATCCAGACT
TTGTAAGCAATGCCTCAGACAAAAAGAGGCGCTACTCGTACCAAGCACAGCCATCTGTGT
GCCGCTGGAACCTGGCTTGCCTAGCTGAGGCGCTGGGCTCTGAGCTTGATCCAGCAGAGG
CAGGAGCCGTCCTGGATGAATTCATGCCCATGTATGAGGCGTTCTACCTATCTATCATGA
GGAAAAAGCTGGGCCTTGTAAGAATAGAAGAGGCAGAGGACCGAGAGCTTGTATCAGATC
TGTTGCGTGTCATGCACAACACAGGTAAAAAAAAAAAGGATTCTTGGAAGCCTAACCATT
AAACCACCTATATATCCTCTCCCTCTCACTCTGTCACCATTGTGCTTTGGTATTATGCCT
TCCAGGTGCCGATTTCACAAACACCTTCCGCTTGCTGAGTCGTGTCCCCTGGCCTGAAGA
GGGCGATAGTGAGAGAGCCACTGTGGGCTCAGTGGTGGACCTCATCCTAGAGCAGTGTGC
CTCTATTGAGGAGTTAAAGGTGGCTAACAAGCCAACAATGGAAGATTGGTGAGGGGGTGT
ATGGTGGCTGATGTTCTTTTCATAGAACAACCAGAACATGTATATAAGGTCTGCCAATGG
CCCACCATATACTCCCAATGTTACTCGAATCCTTGCTTACCACTGTAGTTTAAAATCGTT
ACATCTGTTTTTCTTTTTATATGCTAGCAATTTGGGAGCCAATCTTACCAGGATAATATG
TAAGTTAAATTTAAGCTTTGTGGTATTTTAAATGGGTATATTGTGGAAGACTCTGATATG
TATATATGGAAAAACCAAGAAGCACTAGAGGTGGACTTAAAATGAACTTTAAACATAACC
ATGTCTCTTTTTAGTGAACTGGCAATGATCCTGTCTCTGGCACAAACCAGTCCACTCATG
TTTGGGATGGTGGCAGACAGCCCAGGTATGACCCAACAGCTTGAATTATTGGGCCGACTC
AAGGAGCTCGTCGAGACCAACCAAGATGACCTTAAAAGGAAGCAACGTGATGACTGGATC
TACTGGATTGGTCAATACAGGTATGAAAAGAAAGCCAGAATTTTTTTTTTATGGCTTCTA
CAAAAGCGGCTGGTGCAGCACATTAATTGAAAAGCTGATTTGGTCCCTAGATCCTGCAAT
CTGCAAGAGCACTGAGGGTACTTGTGATTGGTTGTGTTGCACTCTGATTTGTTGGAATAG
CATTGCTGATGAATGTTTGCCAGAAAAATTGAAAAGAAGATGCAAAACAAAAGAGTAATT
GTTGTACTCTACATCAGCGGTCCCCAAACTTTTTTACACCATGGACCGGTTTATGTCCAA
CAATATTTTCACGGACTGGCCTTTAAGGTGTAGCGGATAAATACAACAAAATAAAACCAG
TATAAAACCAAAAAAAAAAGAAGATTTATTCATAACACACAGGAAAAGACCCAGGGAAAC
CGAGTTAACAATAAAAACGATTAAAAAAAACGCTAAAAACCATGAATTTCACACCTGAGC
CTCAACTTTTGCGGCCCGGTACCAAACGACTCACAGACCAGTACCGGTCCGTGGCCCGGG
GGTTGGGCACAGCTGCTCTACATAAGGGACATCACATTCATTTTATATAGTGGGCAGCAC
ACATCTTCACACACCCCCGTTCTCTGTTATCCTTTGGGGCAGAGGGGCTGGGAGGAGGTG
TTAGCCGTCCGATTGGGGTCTGGGATGTGGGGCCTCCCTGCTGCGGAGCTGGGGGCGGTC
TGCTTGCCTCCACCCCAGGGGAAAGGGTAACACCTCCTGGGTCTCCTGGGTGCGGTTTCC
CCCTCTGGGGGAGAGGGTACCTGGACCTGAGGTATAGAGTATGTTTGGGGAGTGTGATTG
TGTGTGCAATGTGTATTTGTGTCTGTCTTTACGTTGGGTGAGTGCCGAGTGTTTGTATAT
GTGTGCATGAGGGTGGGAATGCACGTTTGTGTCTGTGTGTGCCTGTTTGTCTGTGTCTAT
ATGTCAGGTGGGGTCTCAGACTCCACTTCTTTGAGAACATCTCAGGCCCTCCAAAGTATG
GAGGCCTATCTCCCCTCACCACACTCCCTGCTGGTGGCTGATGCCCTCAGGCGTCGGTGC
GTTGGTGGTTCTTGGTGTCCGGGGCTGGCCGCTCAGGTATGTACCGGCTGGATCTCCTCC
ATGCCTGCTTCATGCCCTGGGGGACGGGACTATGTCTCCCTACACCCTCTAGCAGATCAT
TACATGGAGAAACCTTTTGAATACAAGCGCGCTCATCCACACAGGTGTGCACACGGGTGT
GCACTGTTCATAGACACAAACTACACCTTTCTTGGCTGCTACCTCAAAGCACATTGTGCG
CTGTCGGTCCTGTATGCTGCAAAACAACATTCAATATTTAGTATTTACTGTTATTTACAC
TTAGCTAGATTAATGCGATGGTGTTGTGTTTATTATGTTGTGCTCTTTTTTTGCTTGTTT
TCTCTCTTTTTTTCTCCCAACAGGTGATCTGGGAGATTTTTTTTTCTTTTTAAGTGTCCT
TTCTTACTGTCCCTCTTCCCCTCTGTTTTTCTTTTCCTTCATCTTTCTTTCTCCCTTTCC
TATCCCCCAGACATGTCTGTCCCGTTTGTAACAACTGAAAATAAAATAAAATAAAATAAA
TAATAACAATAAAGGTCGATCAATAGGACCAATACAGCAAGGTCATGATGATCCACTTGG
TAAAGTAAATCCGTTGGGTATATTTGTTGGCCTTCAGACTACAATTCTGATGGCTAAAGA
TACCGTAAATCCCGGACTACAGAGCGCACCTGATTAAAAGCTGCATGCTCTAATTGTTGA
AAGAAAATCAATTTTGTACTTGTACAGGCCGCACCGGATTTTAAGCTGTATGCGTTTCAC
TTGTAATATGAGATATTTACACAGAAATATTACACGTGAGAATTTTTAACATTTAATTTA
ATCCGTAAGGTAACATAAACATGGTAACATAAACGTTATGGTAACATACAAAAATACATA
CTGCAAATGCTTTTTTTCCTCGAACAGCGCCTGTAACCTTTAAGTATACGTACGTATCGG
TAACACACAAATTACGTTGCTTATGGTTTTTTACGGAACAGTGCACAAACAACATTACAA
CGTCTCTTAACAACCGATAAAAATATATACCGTATATATACCACTTATCATTTTGATTGG
TCTACTGTTACCAGGCAAAATGTTTTTGGCTGCATGAAAAAAAATTATGCATTAGTCGCA
CGTCAGTATAAACCGCAGTGTTCACAGTGTGGGAAAAAAGTAGCAGCTTATGACCCGCAA
ACTACGGTATATATATGTGTATATGTAGTGGGCAGCATACAGTCAACCTTCTCCTGTCCT
GTCAATATGAAATAAAAAGTGTTTTCCGCTTATCCAGTTCAGGGCTGTGAGGTGGCTGGA
GCTGTCACAGGGTGAAAGGCTGAGGACATCCTGAACAGGTTTCCAGTCTGTTGCAGAGCT
CACACAGAGAGACTGGCAACCACCCGGGCTCACATTCACACCTAAGGGAAATGTAGAATA
GAATAGAATAGAATAGCTTTTTATTGTCACTGTTACAAGAACAGTGAAAGGCAGTTTGGC
ATCTCTCCATGTGTGTGGAGTACACAATAGCGAATGTATTTACACAATAACAGACAAATT
TACATTTACACAAAAAAAGATATGTACAAGTTATACATACACCTGCAAACATACACGCAC
ATACATACATATATGTATATATACATATTTGCATCCGTACATGCGTACACACACATATTT
CCACATACACACTTACATCTATATACATACACATACATGCCGTCTAACTAGCAGGTGCAT
TGAGAGGTGCAGTGTGATCAGTGATATTGCACATTGAGTGGGGGGTGCTGTTGGAAGTAT
ACTAAATACGGTTATAATAAATACAGTTTAAAGAGGTAGGAATGTTGGTTGCATTGAAGT
ATAAACAGAAATACGATTTATAAATAAGGTGTAATGTCCATGAGTGCTGGCAGTGCAGTT
ATCCTCCAATCAGGGTGGAGGTAGGGCATGTTTGACAGCCTGTGGGTAAAAACTTCTGTT
GAGTCTGTTTGTCTTTGACCTGATGGACCTGTAGCGTTTACCAGAGGGAAGGGGGGAAAA
AAGTGAGTGTCCAAGGTGCGAGGGATCTTTGATGATGATGCTGGCTTTCTGCTGAAGTCT
GCCAGTATAGATGTCTCTGAGGGGGGTTAGTGAAGTGCCGATTGCCCGCTCTGCTGCCCT
CACCACCTGCTGCAGTTTCCTCTTGTCCTCTGCAGTGCAGCAGTTGAACCAGAGTGTGCA
GCAGTAAGTCAGAAGGCTCTCAATGGCGGAGCGGTAGAAGTTTAGTAGCAGTCTTTGGGG
TAATTGGGCCTGACGTAGTTTCCTGAGGAAGTACAGCCTTTGTTGTGCTTTCCCTACCTG
GTGGGAGATGTTTGTGGACCAGGTAAGGTCGGCCAAGATGTGGACTCCGAGGAACTTAAA
GCTTTCTACCCTTTCTACCTGCTCCCCATCAATGTAGAGGGTAGAGTGCTCAGATCGCTT
TGTTCTTCTGAAGTCGATTACCATCTCCTTGGTCTTGGCTGTGTTCAGATGCAGGTTGTT
GTCGTCACACCATTGCTTCAGATGCTGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCACAG
TGAGCTGCTGAGTCCTAAGTTGCTTAGTTTATTAACCAGTTTGTGGGGTTGAACTGTATT
GAAGGCAGAGCTGAAGTCCACAAACAGCATTCTCACATAGGTGTTACTACAGTCCAGGTG
TGTGAGGGCTGTGTGAAGAGCTGCTATTATGGCATCCTCTGTCGACCTGTTTGCCCTGTA
TGCAAACTGGTATGGATCGAGGTTTGCAGGGATGGCAGCTTTAATGTGGGACATGATGAG
CTGTTCGAAATTAGTAGAATTGCCAGTTTAACCAAACATGTACGTCTTGGGACCATGAAA
GGAAGCTAAAGTACCGGAAAGAAGCCACGTATGAATAGTGCATGGAAACACCGCACCACA
GTGCTGCCTAGCTAAATATCTGTTTATGCTGATTTACACATTGTTTTAGATTATATGAAG
CAGGAATCTCTGTTTTACCCCCCATCATTTTTCTACCATCTTGCTTTTTTATGTGTTTAA
ATCTCAGGAGGCGTTTAGGACGGGAGTGTGATAGCACAAGTGACTTACCTGTTATCATAA
AGGAGCGACTCAAAGTGATGAACGGCATCAACCCCCGCGTGGTCTTACGCAATTATATTG
CTCAGAATGTAATTCAAGCTGCAGAAAAAGGAGACTTCTCTGAGGTTAGGCAACATTTTT
TTTTCATGAAGCTTTAATGTAGTCCTTAAGGAGTGTGAATTTCTCATTGAAGTGCTTGTT
TACCTCAGCATTATTGTTGGAATTAATTGGAGTACAAGTCAGTTAAACTGAGTCTGTCAC
TAGGTGGAGAAAAACATGTTTCAGTCATCACCTGCCTTGTTGCATGTCTAGCAGCTGTTT
CATTTCTTTGAGTGAACTTATTGTACCTCCAGTTAGAGGTCATTTAAAGGTTATTGTCAA
CATGTCCTGCAGATTGTTAGGGTTCTCAAAGTTCTCGAGAAACCATATTCTGATCCTGAA
ACTTTGTTTGGACGTGATGGATGTGGTGAGATGGAGCACAGTGGGGCGGAGCTGGATGTT
GCATATGACGGGAAGCCTCCAGCCTGGGCACAAACAGTTTGTGTCACATGATCCTCGTAA
AGCCTCCCAAGCAGGTGGAGGAAGGTCTGTAGGACAGCAATTTTACAAGCAAATGATATC
TGTTGTTGGCATTTTGTTATCAACAACTCACTTATTTTCCATTTTCTCCTCAGACTTTAT
TTCCTGCTTCCTGTTAGGAGGATGTGATGCAGGCCTCTGTGTTCTGGTGTTCATTGTTGT
GCAATTAGTTTGGTATTTGTGTGATCACACGCTTTTATTTCAATGTGCAAATGTGTCTGA
TGAAAAGACTAAAAAATAGACAAACAGAAACGTCACTGCTGATGAAGTATGATGGCTCAG
GCTACCAGTCACGCAATGACCTGCCTGGGCTTGAAACACAAGGAACACAC
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