SelenoDB
Release 2.0
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Transcript Report for SPT00001949_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001949
Transcript release2.0
External IDNone
Gene SPG00001855_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001949_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Medaka (Oryzias latipes) # Full length # Forward
ATGGGATCGGCGGGCGCGGAGCTGCTCGTCACACTTCAGATCCTGCCCGGCTTCTTCTCC
AATTGCCTGTTCATGGCTCTGTACGACTCGGTGGTGCTGCTGAAGCGCGTCGTGTCGCTG
CTCAGCTGCTCGCGCTCCGTCAGCTGCGGAGAGTGGCGCCGCATGCTGACCTCTGCGGGG
CTGCGCGCCATCTGGAACAGCTTCCTTCTGGATGCCTACAAGCAGGTAACAATCTCATTC
TTCCCACCTGTTGCAGCTTTGTTGGGAGACTCCGAGAATGGGGGGGCCACGGTGGCACAA
CGCGATAAACGCGTTTTGACCGTCTGGACTCAAGCCCACACCTTCTCAACTGCGCCAATA
TCTGCAGAAAGCACGTCTGAACCTTTGCTGTTCGTCCAAATAAAATTAAAAGTCCTGGCA
GGAGCGCAGAAAACCAAAATAGAAATAGCCTGAGAGCGCGTCAGGAAAGTTTGAAGGTTT
TGTTTTCTGTTGATTAAACGTGATCATAAAAGTGCTGACAACATCAGAATCATCTCTAGA
CCTTGAATTTATGGAACCCAAAGTGAGACCAGACTTTGGACCTGGAGTTGGCTCCAGCAT
CTCTTAATTTTAGAGCAGTGACTTTGTTTTTTATGACACTGAGATTTATTGGAGGCTTCT
TTGTTTCTCTGTTAAAGTTCTGTCCCGTTGAATCACTCCTTCATTTATTCCTGCATTCTA
ATGGTTCCCATTCCTGCTGCTTTCCGGACTTCCATTAACTTCACAGCAGCCGAAGTCTCC
CTTCTTCATGTTTTGTGGAGCTCCAGATGTTTTCTGGACAGGAAATTTCTCACACTGGAC
TTTATTTGGAGCAGAAAGGGGTTTGTGCTGCTGAGATGAGACAGTTGTCATTCTGAAAGA
GCAGTTTCAGGACAACAGTGTGCTTTCCTTTGACAAACGCATTGATTTTCGGGCAAAATC
AGGCAGTAATTATGAACTTTTTTTTCTATAACAATCAAAATAAATATGAAAGATTCAAAA
TAAATGATGGACAGGATGTACCCTACTCCTTGTCCTGCGACTGCTGGGATGTGTTCTGAC
AGACTCTGTGAGCCTGAATATGGGTGTCAACTAGAGAATAAAAGGGGGGTGAGTTCAAGC
ATCCAAACAGTTTTTCAATTTTTTTTTCCAACCAGGAGAAAATCCCGTTTTTTCTCAAAC
AAACTCCAGAGGTTCTCATTAAAGACCTCCTGTCAGAGGTCAGAGGTGACATTTGGCTCA
TTGTACTTTTTGTAAAGGGGGACAACTATCCATTTGCACAAACTCCATCCATGCAGATTC
ATGTCTCCAAAAGCTTTCCAAAATGAATTTGAGAACTTGCTCAAGCTGAACCGTTTGATC
CTGGCTACTGGAGCTGTCTTTCAGATCATGTGACGTCACATCACTGGTGGAACTTTGTGC
TAGATATAGTACGGCATATTTCAATACACACATTCATAAACTTCAAGTTTTTTTTTCTCC
TCTTAAGGATTTTGAAGCCATTAAGCCTGATGTACGTGTTATGCTGCTTAAAACCCATCA
CTAAACCTGTTTTCCTGGAAATTCTCCTCAACTGTTTCTGCAAAAAAGGAATTTTATTTG
AAGCTTATTATTATGTTTGAGAATAAGCAGTGGTGTGTAAAGTATACAGATAGACAGATG
GGCTTAAATCTGGAAAAGCAGATTTGTGCTTTCTGTTGATCATAATGTCAAGACTTTATG
TTTCCACACGGATCTCTTTGAAGACCCACGCCGATGAAAATTGAGTTTTTCCCATGTTCT
TGTGGCATCTTTCTGATGATGGAGGACATAGATTGAGAAATTTAACCTTAAAATTGCATT
CCTTAGTATTTGTTTATTCAAATTGTTGTCATTCAGGCATCAAAAAAAGCTTATTTGTTA
TGTAGAAAATACGCTGGGTGGGCTATGTCCTAGAAAACAACACCATTTTTTTTTATTTGG
GCAAAAATGATTAAATGATCACTGGGAACACATTGGAAATAAATCATCAGATGTACAGAG
TGGGTTTTCTCAATAATGGATGCTATTATTTAAAGCATCCATGTTTGACTTCAAATCAGG
TTTTGAAGGTATCTGCTTTGCAACAGCATCACATTGTCAAACCTTTTCAGAGCTTCCTGA
GTCCAACATGAACTTTAGTTGAGTTCTCTGTGATCCAGAAACGGAACAAGGAAAGTTTGG
ATTGTTTTAGAGGCAAGATTTTGTGTTGACTTTGCAGCTGAGTGCTGATACTGATGCTAA
AATGGGTCATTAACCCTTGAACTGAGATAGTGCACATTTATCCTGTAATATTATGGTGTG
ATATGCAGTAAAAAAAAAAAAAAATTTTTTCAGGTCTAAGGTTTTCAAAAGTTTGATTTC
CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGCCTTTGTGATGTCTTTGTGTTG
CTAAGGCTTGATTAGATCAACCGATGGACTGAAATAACTGTCATTCTAGTGGAGATTTGG
GCTTCTAATGAAATCATACTTTTCCTTCAGACTTCCTGTTCTACAATGACCTTTTGTGAC
CTTGTTAAAGACATTTTCTTTTAGCGATTCTTCATCGTATTAGAACGACAGACTGTCAAG
CCTTGAAATACTGATGAGTTTGATATTTTTCAACATAAAAGATTCAGATTTTACTACCTG
TCAGTTTTTGGCTGAAGAAAGTCATGCCAAAAAAGGAAAATAAATTATGTATTTTTGAGG
AAAACCTGTTATTATATAAGCAAATGATTTACTTAAAGTCCAGTAACAATCTCTGATCAT
GTCAAAGATCCAAAAGGAGTGCAGGCGCAGAAGTTGACACAATTGTTTTTTTCTTTCAAG
GTCAAACTTGGCTGTGAAGCACCAAACTCTAAGGTGGTGAAGGTTCCTGAAAGTCCTCGG
TGGAGCAGCTCCATCAAGAGCATGACTAGTGTTCCTCGTGGCGCCAGGGCCCAAACTGGA
GACGAGTGCCGCCTTTTGGATTTTGAGTCATCAGATCGCCCTCTGGTGGTCAACTTTGGC
TCGGCAACCTGACCCCCGTTCATCAGCCACCTTCCAGCTTTCCGGCAGCTGGTGGAGGAC
TTCAGTGACGTAGCTGACTTCCTGCTGGTTTACATCGACGAGGCTCATCCCTCTGACGGC
TGGGTGGCTCCTCAGATGGGCCCTTGCTCCTTCAGTTTCCGGAAACACCAGAACCTGGAG
GAGAGAATGGGAGCTGCGCGCCAACTCACTGAGCACTTTTCCCTACCGCCACAGTGCCAG
TTGGTGGCTGACTGCATGGACAACAATGCGAACGTGGCATACGGCGTGTCCAATGAACGG
GTGTGTATAGTGCACCAAAGAAAGATCGCCTACCTGGGTGGCAAGGGGCCATTTTTCTAC
AACTTGAAGGAGGTGCGCCAGTGGCTGGAACAGTTACGGCAGACGGTAGGACCAAATACA
GAGGAGTGAAGAGAAGGAAGTGCCTTTCATTCAACCTGGAAAAAGATCCTCTGGCTTCAG
AAAAAACTCGGAAAGTCTGACTTCCTCTGCCTTTGAGCTGTAACAAATCGTCCTTCAATG
CTGCAGATCAACCTCGTTTTCATCGCTGCTGATCTTGTTCTTCCAACGCTTTCAAACTCA
GCACCAATGTGACGATCTATTCCATCAAGCCAGGGCACCTGAAGCACCTAAACACACAGC
TTTTGCATATTTTATATGCTTTGTAAAGTACATATTTTTTTGTAAAATGATAGAATTTCC
TAATTTAATAATCGTATATGAATTAATACATCTCAATCTTTTTATAGAGATTTTATTACT
TCTACACATCCTTTTTATGCACTAAACCAAAATCTCAACTACACATCAAACCTTTCGCCA
CTGTACAATCTTTATTTTTATACAACAAACTGATTAGAGTTTTTAAGTTTATATGAGAGA
ATCAAAGTAGATTTAATGTGGCTTCCTTGTGAAACAGCATGTTGGTCAGTTTATCTGGAG
GTCACGGATGAACACTTTGGAAGTCTATCCCTAAACCAGGCAGCGAGCTGGTTTCTGAGC
TTGCAAAGCATTCATCTTGTTTTTCTAAGCTTTCCTCCAGAGCTTTCTCTGCACACTCTG
GCCTATTGTCTTACTGGAGAAATGTTTTGTCCAGTCAGCTCTGTATTATGTTTCTTTAGG
GATTTCTTTGTACCTCTCCTCTTGCCAAGTGACTGTTGACCCAGTCTTGCACATGCGTCA
GCTTGGTGCGCTCAGTCACAAATGCACATCTGCAAGTTGTAGAAAAGTTCCTGCAACTTG
GGGACAACCTCAGGAACATGTGGAGCTCGCTGAAAGGCTGTTAGATGAGTTGTTGGTAAT
TGAGCTTGGCTCCGACACTTTTTTCTTTCTTAACAGTCACAGTTTAAACAGTTCTGATTT
ATTTGCAGTTTTCTGTTTGGTGCAGAACATTCCTGAATAGATAATCTGATGCTCAGAGAC
AACAGATGCTGTCTTTCATGTTTAAGGACAATCCATAATTATTCGATTGAGAAAAAAGAC
ATAATTGCACTCTGTAGGTTGCACATTGTGTAAATAGAAGTATAGTGCAAAAGTATTTGC
CCTCTGTACAATTTCTAAAGGTAATATTCAATACTTTTAAGTGATATGACAAATAGGGAT
CCATTTAAAGCCCATCAAATAAGACCAAACTTCTAATATGCAGTAAAAAAAAGCGTAAAT
TTAAATCCTGATCAACAATTGACTGTTTATCCAGTTGTAATGTTGTGCATTAGGTGAAAA
AGCTCAACTCCAGCGCACTGAAGGGAGGCATACTTCCTGCTCTTTTTAAGGGAGTCTGAC
GGACTTTAGCCCATAAAAGAGGATTTTTCTTCCTGTTTGTAAACGGAAACAAAAACAGTA
AAGGTTCTAATCCAGTTTGTATTGTAGCTGCTCTAGAGCCGGTACGGAAATGTTCCATAA
AATAACGCAGATAATCTACTCTGTTTCTGTCTTTTTCTCATCTTGAGCTGTGAGTCACAA
TACAACAACCTTTTAGACTATGACTTTAGGTTTTTTTCTTCTTTGCAATCACAGGATTAG
AGCATGAAAGCTACTTTAAACTACTTTGTTTTCCACTGTCAAGTAATGCAGCCCACCAAT
CAGTTACTCATATGTAATCATAACTTCATTTTCAAATAGCCGACATAAATAGAAACATAT
CAAAATGTCTTCATTTTACGTAGCAACTGCACCATTAAAACTGTCGTAGACCTGTTTAGT
AGATCTCCGGTTCACACCATGACACCTTTAATGTCATATTTAATGGGTATGTAATGTTGG
TTTAGAACTTGGAAGGAAATGCCAGACTTTCCTTGAACAGATGGTTTGCTCTGGTCACAG
TGACAGAGGTGTGTGAATGAAAACCTTTGACGAAAGAGTCACTGGCTCAGTCTCTGGTTG
GATGGAGAACAGCACCGAGT
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