SelenoDB
Release 2.0
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Transcript Report for SPT00001949_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001949
Transcript release2.0
External IDNone
Gene SPG00001855_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001949_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Medaka (Oryzias latipes) # Full length # Reverse
ACTCGGTGCTGTTCTCCATCCAACCAGAGACTGAGCCAGTGACTCTTTCGTCAAAGGTTT
TCATTCACACACCTCTGTCACTGTGACCAGAGCAAACCATCTGTTCAAGGAAAGTCTGGC
ATTTCCTTCCAAGTTCTAAACCAACATTACATACCCATTAAATATGACATTAAAGGTGTC
ATGGTGTGAACCGGAGATCTACTAAACAGGTCTACGACAGTTTTAATGGTGCAGTTGCTA
CGTAAAATGAAGACATTTTGATATGTTTCTATTTATGTCGGCTATTTGAAAATGAAGTTA
TGATTACATATGAGTAACTGATTGGTGGGCTGCATTACTTGACAGTGGAAAACAAAGTAG
TTTAAAGTAGCTTTCATGCTCTAATCCTGTGATTGCAAAGAAGAAAAAAACCTAAAGTCA
TAGTCTAAAAGGTTGTTGTATTGTGACTCACAGCTCAAGATGAGAAAAAGACAGAAACAG
AGTAGATTATCTGCGTTATTTTATGGAACATTTCCGTACCGGCTCTAGAGCAGCTACAAT
ACAAACTGGATTAGAACCTTTACTGTTTTTGTTTCCGTTTACAAACAGGAAGAAAAATCC
TCTTTTATGGGCTAAAGTCCGTCAGACTCCCTTAAAAAGAGCAGGAAGTATGCCTCCCTT
CAGTGCGCTGGAGTTGAGCTTTTTCACCTAATGCACAACATTACAACTGGATAAACAGTC
AATTGTTGATCAGGATTTAAATTTACGCTTTTTTTTACTGCATATTAGAAGTTTGGTCTT
ATTTGATGGGCTTTAAATGGATCCCTATTTGTCATATCACTTAAAAGTATTGAATATTAC
CTTTAGAAATTGTACAGAGGGCAAATACTTTTGCACTATACTTCTATTTACACAATGTGC
AACCTACAGAGTGCAATTATGTCTTTTTTCTCAATCGAATAATTATGGATTGTCCTTAAA
CATGAAAGACAGCATCTGTTGTCTCTGAGCATCAGATTATCTATTCAGGAATGTTCTGCA
CCAAACAGAAAACTGCAAATAAATCAGAACTGTTTAAACTGTGACTGTTAAGAAAGAAAA
AAGTGTCGGAGCCAAGCTCAATTACCAACAACTCATCTAACAGCCTTTCAGCGAGCTCCA
CATGTTCCTGAGGTTGTCCCCAAGTTGCAGGAACTTTTCTACAACTTGCAGATGTGCATT
TGTGACTGAGCGCACCAAGCTGACGCATGTGCAAGACTGGGTCAACAGTCACTTGGCAAG
AGGAGAGGTACAAAGAAATCCCTAAAGAAACATAATACAGAGCTGACTGGACAAAACATT
TCTCCAGTAAGACAATAGGCCAGAGTGTGCAGAGAAAGCTCTGGAGGAAAGCTTAGAAAA
ACAAGATGAATGCTTTGCAAGCTCAGAAACCAGCTCGCTGCCTGGTTTAGGGATAGACTT
CCAAAGTGTTCATCCGTGACCTCCAGATAAACTGACCAACATGCTGTTTCACAAGGAAGC
CACATTAAATCTACTTTGATTCTCTCATATAAACTTAAAAACTCTAATCAGTTTGTTGTA
TAAAAATAAAGATTGTACAGTGGCGAAAGGTTTGATGTGTAGTTGAGATTTTGGTTTAGT
GCATAAAAAGGATGTGTAGAAGTAATAAAATCTCTATAAAAAGATTGAGATGTATTAATT
CATATACGATTATTAAATTAGGAAATTCTATCATTTTACAAAAAAATATGTACTTTACAA
AGCATATAAAATATGCAAAAGCTGTGTGTTTAGGTGCTTCAGGTGCCCTGGCTTGATGGA
ATAGATCGTCACATTGGTGCTGAGTTTGAAAGCGTTGGAAGAACAAGATCAGCAGCGATG
AAAACGAGGTTGATCTGCAGCATTGAAGGACGATTTGTTACAGCTCAAAGGCAGAGGAAG
TCAGACTTTCCGAGTTTTTTCTGAAGCCAGAGGATCTTTTTCCAGGTTGAATGAAAGGCA
CTTCCTTCTCTTCACTCCTCTGTATTTGGTCCTACCGTCTGCCGTAACTGTTCCAGCCAC
TGGCGCACCTCCTTCAAGTTGTAGAAAAATGGCCCCTTGCCACCCAGGTAGGCGATCTTT
CTTTGGTGCACTATACACACCCGTTCATTGGACACGCCGTATGCCACGTTCGCATTGTTG
TCCATGCAGTCAGCCACCAACTGGCACTGTGGCGGTAGGGAAAAGTGCTCAGTGAGTTGG
CGCGCAGCTCCCATTCTCTCCTCCAGGTTCTGGTGTTTCCGGAAACTGAAGGAGCAAGGG
CCCATCTGAGGAGCCACCCAGCCGTCAGAGGGATGAGCCTCGTCGATGTAAACCAGCAGG
AAGTCAGCTACGTCACTGAAGTCCTCCACCAGCTGCCGGAAAGCTGGAAGGTGGCTGATG
AACGGGGGTCAGGTTGCCGAGCCAAAGTTGACCACCAGAGGGCGATCTGATGACTCAAAA
TCCAAAAGGCGGCACTCGTCTCCAGTTTGGGCCCTGGCGCCACGAGGAACACTAGTCATG
CTCTTGATGGAGCTGCTCCACCGAGGACTTTCAGGAACCTTCACCACCTTAGAGTTTGGT
GCTTCACAGCCAAGTTTGACCTTGAAAGAAAAAAACAATTGTGTCAACTTCTGCGCCTGC
ACTCCTTTTGGATCTTTGACATGATCAGAGATTGTTACTGGACTTTAAGTAAATCATTTG
CTTATATAATAACAGGTTTTCCTCAAAAATACATAATTTATTTTCCTTTTTTGGCATGAC
TTTCTTCAGCCAAAAACTGACAGGTAGTAAAATCTGAATCTTTTATGTTGAAAAATATCA
AACTCATCAGTATTTCAAGGCTTGACAGTCTGTCGTTCTAATACGATGAAGAATCGCTAA
AAGAAAATGTCTTTAACAAGGTCACAAAAGGTCATTGTAGAACAGGAAGTCTGAAGGAAA
AGTATGATTTCATTAGAAGCCCAAATCTCCACTAGAATGACAGTTATTTCAGTCCATCGG
TTGATCTAATCAAGCCTTAGCAACACAAAGACATCACAAAGGCAGGACACACACACACAC
ACACACACACACACACACAGGAAATCAAACTTTTGAAAACCTTAGACCTGAAAAAATTTT
TTTTTTTTTTTACTGCATATCACACCATAATATTACAGGATAAATGTGCACTATCTCAGT
TCAAGGGTTAATGACCCATTTTAGCATCAGTATCAGCACTCAGCTGCAAAGTCAACACAA
AATCTTGCCTCTAAAACAATCCAAACTTTCCTTGTTCCGTTTCTGGATCACAGAGAACTC
AACTAAAGTTCATGTTGGACTCAGGAAGCTCTGAAAAGGTTTGACAATGTGATGCTGTTG
CAAAGCAGATACCTTCAAAACCTGATTTGAAGTCAAACATGGATGCTTTAAATAATAGCA
TCCATTATTGAGAAAACCCACTCTGTACATCTGATGATTTATTTCCAATGTGTTCCCAGT
GATCATTTAATCATTTTTGCCCAAATAAAAAAAAATGGTGTTGTTTTCTAGGACATAGCC
CACCCAGCGTATTTTCTACATAACAAATAAGCTTTTTTTGATGCCTGAATGACAACAATT
TGAATAAACAAATACTAAGGAATGCAATTTTAAGGTTAAATTTCTCAATCTATGTCCTCC
ATCATCAGAAAGATGCCACAAGAACATGGGAAAAACTCAATTTTCATCGGCGTGGGTCTT
CAAAGAGATCCGTGTGGAAACATAAAGTCTTGACATTATGATCAACAGAAAGCACAAATC
TGCTTTTCCAGATTTAAGCCCATCTGTCTATCTGTATACTTTACACACCACTGCTTATTC
TCAAACATAATAATAAGCTTCAAATAAAATTCCTTTTTTGCAGAAACAGTTGAGGAGAAT
TTCCAGGAAAACAGGTTTAGTGATGGGTTTTAAGCAGCATAACACGTACATCAGGCTTAA
TGGCTTCAAAATCCTTAAGAGGAGAAAAAAAAACTTGAAGTTTATGAATGTGTGTATTGA
AATATGCCGTACTATATCTAGCACAAAGTTCCACCAGTGATGTGACGTCACATGATCTGA
AAGACAGCTCCAGTAGCCAGGATCAAACGGTTCAGCTTGAGCAAGTTCTCAAATTCATTT
TGGAAAGCTTTTGGAGACATGAATCTGCATGGATGGAGTTTGTGCAAATGGATAGTTGTC
CCCCTTTACAAAAAGTACAATGAGCCAAATGTCACCTCTGACCTCTGACAGGAGGTCTTT
AATGAGAACCTCTGGAGTTTGTTTGAGAAAAAACGGGATTTTCTCCTGGTTGGAAAAAAA
AATTGAAAAACTGTTTGGATGCTTGAACTCACCCCCCTTTTATTCTCTAGTTGACACCCA
TATTCAGGCTCACAGAGTCTGTCAGAACACATCCCAGCAGTCGCAGGACAAGGAGTAGGG
TACATCCTGTCCATCATTTATTTTGAATCTTTCATATTTATTTTGATTGTTATAGAAAAA
AAAGTTCATAATTACTGCCTGATTTTGCCCGAAAATCAATGCGTTTGTCAAAGGAAAGCA
CACTGTTGTCCTGAAACTGCTCTTTCAGAATGACAACTGTCTCATCTCAGCAGCACAAAC
CCCTTTCTGCTCCAAATAAAGTCCAGTGTGAGAAATTTCCTGTCCAGAAAACATCTGGAG
CTCCACAAAACATGAAGAAGGGAGACTTCGGCTGCTGTGAAGTTAATGGAAGTCCGGAAA
GCAGCAGGAATGGGAACCATTAGAATGCAGGAATAAATGAAGGAGTGATTCAACGGGACA
GAACTTTAACAGAGAAACAAAGAAGCCTCCAATAAATCTCAGTGTCATAAAAAACAAAGT
CACTGCTCTAAAATTAAGAGATGCTGGAGCCAACTCCAGGTCCAAAGTCTGGTCTCACTT
TGGGTTCCATAAATTCAAGGTCTAGAGATGATTCTGATGTTGTCAGCACTTTTATGATCA
CGTTTAATCAACAGAAAACAAAACCTTCAAACTTTCCTGACGCGCTCTCAGGCTATTTCT
ATTTTGGTTTTCTGCGCTCCTGCCAGGACTTTTAATTTTATTTGGACGAACAGCAAAGGT
TCAGACGTGCTTTCTGCAGATATTGGCGCAGTTGAGAAGGTGTGGGCTTGAGTCCAGACG
GTCAAAACGCGTTTATCGCGTTGTGCCACCGTGGCCCCCCCATTCTCGGAGTCTCCCAAC
AAAGCTGCAACAGGTGGGAAGAATGAGATTGTTACCTGCTTGTAGGCATCCAGAAGGAAG
CTGTTCCAGATGGCGCGCAGCCCCGCAGAGGTCAGCATGCGGCGCCACTCTCCGCAGCTG
ACGGAGCGCGAGCAGCTGAGCAGCGACACGACGCGCTTCAGCAGCACCACCGAGTCGTAC
AGAGCCATGAACAGGCAATTGGAGAAGAAGCCGGGCAGGATCTGAAGTGTGACGAGCAGC
TCCGCGCCCGCCGATCCCAT
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