SelenoDB
Release 2.0
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Transcript Report for SPT00001980_2.0
Identity
TranscriptSelenoprotein P (SelP)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001980
Transcript release2.0
External IDNone
Gene SPG00001886_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001980_2.0 # Transcript # Selenoprotein P (SelP) # Medaka (Oryzias latipes) # Full length # Forward
CCAGCTCTGCTGTGGGCCTCGCTTTCTGTCCTTTCTGCAGAAGGTGACAGTAATGCCTCT
AAAATCTGTAAGCCTGCCCCCTACTGGGACATTGAAGGACATGTACCAATGCAGGAACAC
CTGGGAAATGTGGTGGTGGTAGCTCTTTTGAAGGCTACCTGAGAGTTCTGCCTCACGCAG
GCATCCAAGTAAGAAAAGTGCACCATTCACAATAATAAAACCAAAATTATTTATTTGTAT
CTATTATTACACACCCCTAAATGATAGCTGGTATATCAGCTATAAAGTTGGCTTCTAGCT
TGTTTTGATTTGCAATAAAGAGATTTTCGCTCATCCTTCTCATCCATTTGTCCAACTCCA
GGATTGGAAACCTGCGTGACAAACTGAACAGGAACAACATAACGGAAGTTTCTTTCATGA
TAGTAAACGAGCTGGAAGCTCTTTCCCAAACCATGCACTGGAAGCTGAAGAAGAAAGCAC
CAACTGGAGTCCCGGTGTATCAGCAGTCCTCTCTTCAAAAGGACGTTTGGGAGATTCTGG
ATGGGGACAAAGATGACTTTTTGATCTACGACAGGTAAAATCCAGCCTGGGCCTCATCCA
TATCATACAGATCATCACTTCATCATAGAGATAGATTCTTAGCTGACTTCAAGTCAACAA
TTCACACTTTTTTAGCTGTAAAATTGATTGATATCACAAACGTTTACTCCAAAATAGATG
GGTAAAATAAAAAATGCCATCTCTAAAGTTTCATGAATGGTCTTTCATTTCTGTTGTCCT
TTATTTTTAGATGTGGTTTGCTCACATTCCACATTGTGCTGCCAAATAGTTTCCTACAGA
ATGCTGATGTGGAGAATGCAATTACAGCTACTTATACTCAAGACATCTGCAACTGCTCTG
TGAGTACCAACTCAAGTAATGAGTTTAACACAAACCCATTTCTATAAAGCTCACTTAAAA
AAAATTAGTTCCAAGAATGAGATAGGGTTTCAAAAGGATCTGAACCCTCGAAGGGTTTAT
TGATTGTTCATTCAATGAAGTCAGTCTAAAAGGCTAACTTGTTCACACAGAATACCATTT
TTTTAAGCACAAAATGCTAATTTGAGCGAACAATTTATGTTTTTATGTTTTAATGTCATT
TCCAGGGCTCTGTACTTTAGAGTTGTCACATTTTAATATTTTTTCATTTAAGACGTCAGA
AAAGAAGATTGTTAAAAAGTTTTCAGTTAGATTGCAAACAAAACTCACAAAAAAACACAT
CTTGTAGTTTTTGACTCAAATAAATGGCAAGGCTTTCTGAGTTTTGTGGCTCATAAGCTA
TCACCATCAGCAATGCGTGTTCAAGCAACCACTTTTTATGAAAAGTCTATGTAAATGCAC
GTAAATGCGCATTTCGGGCTTCTGTCTTTAAACACTCGCGTTTACGTGTTGCTACGCAAG
TTCTTTGACTGTTTTCAGGCTCTATGTTCAAAACGCGCTACCATTGAACTTTGACCAATC
GGGGACTCGGACCTGGTAGCGACATATGGCTGACGTCCTCTTATCCCTTGTGCTATCCAA
GGCACTTTACCATTGGGAGTTGGGCCATCTAGACCCACTAGACAGTGCACTGAACCTTTT
TTCTTCAATGATTTGTGATCTTCACTGGTGTCCATGGATTACATGAAATCTTTCCACCTA
GATCGACCTTTGTCATGGTAGGGAGAGAAGTCATTGTAAGGGTGGGGTCATCTGGACCCC
ACAAGATAGCACAAGGGTTAAATGCACAGAAGTGCCAACAGTTAATTAATGCATTAATGG
TCAATTGCCTTTATCACTTATATTAATAATGGTAGTTTGTGCAAGATTTGCTCCGTTTTG
ACAGTTCGCACCAAGCACTAGTATCGAGTACTGATAGCCTAATGTGAACATCATTTTTTG
TTTGTTTTATTTACATTCTTGATTGCGTTTTGCATGCACTGCTGTGTGTTTAACCTAACG
AGGTTTCTTAGGTTTTTAAGCTATTGTTAATTTAAAAAAACAAACAAACATATCAGCCTT
ACACAGATCCGTTAGCCAAAAGTAGCACATTTGAAGTTCATTTTATTAGGTATGCTTGAG
TATAATTATACAGTATAGCAAGTATACAATAGACCATGAACATGTAGTGTAGGAAGTATA
CCGAATGAATACTTCTTCAGACTAAATTGGAAGATTTTAAGTTTACAATACAGTATATAG
TAGCCTATATAAAAGTAAAGTTACAGGTATCCTGTCTCACTTTTAGAATGGACAAAGTAT
ACATATTGTACACTTAAATAGACTACTTTTTGATTTTGGATGTTTTAATGTTTATTTTTT
CATTTGAAAGCAAAATGATGCAATAGAACAACCTCATTTGTTTACAAGAAGCCTGCTACT
TTTTGAGCTTAGGAAAGTGCAATTCACTAATGCTGTTGTTAACTTTTTCAGGGTAATTCT
ACTTTATCAGGAGGTGGCAACAATTTCACGAGGAATTCCTCTCAGTCGCACAGTGGAGTT
CAGAGACCAGCTGATGAGCCAGAGAATGTGACCACGACATTAGAGGCCAGTCCGAATGAC
AGTCGTCATGAGCATGCCCACCACCATCATCCTCATCATCAGCATCTCCACCACCATCAT
CCTCATCATCAGCATCTCCACCACCATCATCCTCATCATCAGCATCTCCACCACCATCAT
CCTCATCTTCAACAACATTCAAAGCACCAGAATGATGATAGTTATTAACTACAATAGAAT
TTACTCGTACAAAAAGTTTTGTTAGAAGTAACAACATTCTCCGAGTATCTGAATATATTT
TTATACTTAAGTTGTGGATTCCTTGATGGTATTTTCATGCTTCTCTGCTGGGATAAAGTG
CACAGATCTCCTCATCTTCTCCCATAAATGAAGTCCACGGGGAAAAACCTGCCTGCAGGA
GGCTGTGGATGGATGAACAGGAAGTGGTT
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