SelenoDB
Release 2.0
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Transcript Report for SPT00001990_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001990
Transcript release2.0
External IDNone
Gene SPG00001896_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001990_2.0 # Transcript # Selenoprotein U (SelU) # Medaka (Oryzias latipes) # Full length # Forward
GAGGGCGATCTCTCTGCAATGGGGATGTGGTCTCTGGGGCTGGGGGCTGTGGGAGCTGCC
CTGGCTGGAATCTTCTTGGCCAACACAGATCTTTGTCTTCCTAAAGCTGCTAATGCCTCC
CTGGAGTTTCTTGAAGAGGCTGACCTGCGATGCACCCTCGACCGTGAGTGGCACGCCACA
ATCCACCACCCAAACTAAGGGGGCATGCTGCTAGAAGCTGCTTTTTTTACTGGATAAATG
TTTTATGCGACCATAAAAGTTTGTATTTTCTCCTTTAGATATGCAAAGATTAGAATAATA
ATTATTAAATAACTGTGCTTGTCTACAGACACCAAGGTCATCAAAGCAAAGAGGCTGTGG
GATAAGAATGGAGCTGTGGTCATGGCTGTACGGCGACCTGGATGATTTTTGTGCAGAGAG
GTGTCGTGATTTTTGTATTTTAATCCTTACCTTCAAGCATCCGAGTCAAATTGGGCCTGA
CAGTTCAGTTTTTGTGCTGCAGGAGGCCTCTGAGCTCTCCTCTCTGAAGCCCCAGCTGGA
AGAGCTCGGGGTCCCTCTGGTCGCTGTGGTGAAGGAGAACCTCGGCTCAGAGATCCAGGA
CTTCCGACCGCACTTCGCTGGGGACATCTACATAGATGAAGAGGTTGGCTGCCAATTATT
TTATATACATAGTAGGCAAAATACACGCAACATTTATTGTCAGCCTGTTCAATACGCAAA
AGATGACGCTAAATTACGATAAAAGATCACTGTAAATGTTTACACACGTGCTAAAATAAT
CTCATGACAGCTTGAAGTATTGAACAAATTAAAAAGAGCATGTTATGAATTTGACCAATC
TATGGACTCTTCACGTCAAATGGAGTCTATTTGATGTTAGGTGTCTGTCTCCTGTGTAAG
CGAGGGTAATTTGTAGTTTATGTTGACTTTTATTTAAAACAAAAAATGGAAATGATTTCT
TCATGTATCGCATGTAACATCATCATCGCACTAATATCAAACATAGCAAGCTTTCCTCAT
ATCGTGCAGAAAAAAAATCATTTTTCAACTGTTTTATTTGATATGTTTTGACTTTAAATA
CAATTATACATCAACAATCTGAAAGTAAAGCAACTTTTTTCTTGTTTTTAATGCTCGTCC
ATGTACTTGCCTGTTCGTGTTTTGGCAGAAACGCTTCTACGGTCCGCTGCAGAGGAGGAT
GGGAGGTCTCGGATTCATTAGAATTGGAGTGTGGCAGAATTTCATCAGGGCGTGGAAATC
TGGTTATCAGGGAAACATGAACGGAGAGGGCTTCATCCTCGGAGGCGTGTATGTCATCGG
AGCAGGAGAGCAGGTATTTGATCAAACACACAGATATTGATCGACTGCTAATAAAAGCCC
TGCTGCATTCAACAACATGTTTGTTTTTTTTGGCAGGGAATCATCCTGGAGCACCGTGAA
AAGCAGTTTGGAGATAAAGTGGACACAGCAGATGTTCTGAAGGCTATACAGAAAATTGTC
CCAGCAAAATAAGTTTTGTGAGCAATAGAGAAACACTGAAATAGTTTGAAAGATTATTCA
GAATTCTTTTTTGTTGGCATGCTTAGCTTTTTATAAACAAATGTCTAATGTCACATTTAA
TCAGCTAAATGTCTTGTTGTTGCGTTTAAAATCTGGGGTATAAACCGCAGGATGGCGTTA
CACGTCCCTGAAAAAAGCTAGATATGATTTGGGGCATTAAGGGGTTTAAATGCAGCATTT
TCAATCAGGTATGGTAGTCCTAACGCTAATTGAAATGTCATGTTCAAAAACGATTTACTT
GAAAAAAGGACTTATTCTGATTGTTTGTTAGTGACAGTTTTTGGCAGGTTGCAAATGCTT
CATTTGCTTTGCAGGCAGCTGAATCACCTCAGGGGTGAGAGGCAGAAGTGTGTGAACTGT
GTGTGTGATAATGACAACCTGACTCTAAACTCCGTTTTGAGAGGAGCTGGTTCGATGCCG
AACACACGCACAGG
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