SelenoDB
Release 2.0
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Transcript Report for SPT00002159_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesPetromyzon marinus (Lamprey)
Transcript IDSPT00002159
Transcript release2.0
External IDNone
Gene SPG00002066_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002159_2.0 # Transcript # Selenocysteine synthase (SecS) # Lamprey (Petromyzon marinus) # Full length # Forward
GGCCGTGCGTCTGCTGCCCCGTCGATGGATTTCCTCATGACCATGCTGTCTCTGGGCCAG
CGTGGATACAAACGCCTCCTCGCGGAGCGCAAGGTGCGCCCCGCTGCCGGATGAAAGCCT
CGCCGCACCATATCGGCCGCGGGGGTTGTTTGACCGTACTTCACCACGCTGGTCAGTGCG
GGCTGGTGAAGCGCGGTGGGGAAGGGGATGGGAGAGAGGGAGGTGGTGCCCACCAACCCC
AGGACTGGTTCAGATTTATCTCTTGCTACTGATGTTAGCCGTGGCCAGGAATTTAACTCA
GGTCTGCGGGTTCTTGCGCGGTTTGATGCTCGGACTTCCCGTGCGTGCATCAAGTCGCAC
ACGTAGGGATTGGTTGTGCACAGATTTAAACGAACAATATAGCACACATAATCGAGGTTT
TTGGGTTAGATCGCGTAAACATATAAATGTGTCGTTAAAACCCGCCACCACCCGACACAG
CCAACTAGTAAGGGTTGTCACGTAAACAGAACATGCCAATTTGTCACCAGTACAGCACAC
CGGTGTGTTGCAGAGCCAAGCCACAACATTTACAAACTTTGTACGACGTTTCGCCAGTAA
TTACAACTAGCTTCATCAGGCGACAACCAGATTTGTGGAGAAGTCTTACTGTTTCATTCC
TTATATAGAGGCGTAGATGTGTTGACCATTCCTCTGCGCTCTTGCACAATGTGGGGGGGG
GGGAGATTACTGAGGGAACGTGCATTATGCATGTGCATTATGAGAGCCCTTTGAACTTGT
CCTTCCTGTCTATTGTTTATTAAAATAGCCCTACCAACGGTAATCCCTATTGAAGTATGC
TGCCCTTTGTCAGCATGCATTTTAATAATGTATTATTTGATTATTCGCTTCCACACAGCA
CTAAGACGGTAGCTATCTGAACGGTTAAAGTTATTTTTATTTCTTTCAATTTCGATAGAT
TATCTAATTAGTCTTGGCCAGTAGTAGCTAGTTTTGCACAAAACTTCAACATTATCAAAA
TCAATTTTGTGTCCTTGTAGGCACGCGTGTTCTGCTACTGCTGACAGTTGCATTTGGGAG
AATTTAATATTTCTCTGATGTTCTTTTAACGACACATATATTTACGCGATCTCACCCAAA
AGCCTCTATTATGGATGATATTGGTCGCGAAAGCCTACGTGTTAAATTTTGCACCCATAA
ATCTCAATGTCTATGTGTAGGAGATATACACATGTGTGTGTGTCCGTGTATAGGCAATGT
ACACATACCTGGAGAACAAGATGAAAGTGCTGGCCCTGGAGAACGGAGAAAAGCTGCTAC
ACACACCGCATAACCCCATATCCCTGGGTACGCACACACTGGGACCAAGACAGAGATCCC
CTGTTGGGGAAAGTGCTGTTAGCGAGTAGCACCTGTGAAGGCGGACACGACACATGAGGG
GGTGGGTGGCCAGCTCCATGCCCAGCCACCTTTGTCTCTCCAGTGATAATATTAAACATT
GGTACACACACACGGGCAACGCATGGATACATGGATGTGCATATACGCAAGTACGAACAC
ATGGATATTCATACACGAGTGTACGTGCACAGGTACACACATATGTACACACATGCACAC
GCACAAAGAAATACAAAGATCTCTTTTGCATCCTGTATAGGCAGTAGGGGGTGAGTGTTG
TTAGAGAGCATCTATTAAGGTCTGCGTGGGGCAGGAGCACCATGGTTCCCCAACACGTGT
AACCATGTATACGTCTGTGTCTCCATGTGTACCAGTGTATCTATCTGTGCTCGTGTGTAT
ACCTTTTTGACCATATGTATCCGTGTGTGTCCGTCTGTGTGTATAGCGATGTCCATGAGC
TCCCTGCCTCCAGCCGTTGTGACACAGCTGGGCTCCATGCTGTTCACAAGACAAGTGTCC
GGCGCTAGGTTGGTGCAGTTTCCTATATCGATTCATCGACTCCGGTTCGTTAGACGCGAT
GCTTTGGCTGCGTGCCGATGAATTTCCCTCGTGTGTCTCGTGTCCCCGTGGGTTCCTGTG
CGTATCTGTCCATCCCCGTGTGTCTCCGCGTGCATTCTGTCCCCATGTCCAGAAGTATCT
CATATCCACGCGTCTTGTTGTCGCCATGTACCTGGTGTCCCTGTGTATGTGTACCTTATG
TCTCCATGTGTCTTCCATAACAGGTTTTTTGGGTTAGATCGCGTAAATATAAATGTGTTG
TTAAACTGCCATCACCCAATGCAGCCAATTAGTAAGGTTTGTCACATGAACAAAACATGC
CAATTCGTTACAAGTTGAGCACACCGATGTGTTGGAGAGTAATCCCACAACATTTACAAT
TCGATTATGACTTTTAACCGGTAATTACAACAACCAGCATCATTAGGCGACAGCCAGAGA
TGTGGAAAAATCCTCCTGTTTCGGTCGTAAATTGAGGGATAAATGTTATGTCGTCACTTG
TGAGCCAATCAGGTGCCAATACCAGAGGGGGGGTTAAATATAAATTATAATGGATGTCTA
TTACACTGTGTAACAATTTATTTTTTGTTCCTGGGTAGTAAGTGATATTTCCTAATTGCT
TATGCCTCAAAAGTACAGAAAATGGCTATTATTCCCCACATACTTTGCTTTTGTGACCCG
GACATTGATATTTTGAAATTTACCTATTTTCCAGAACATTCCAGATAGATTCAGTGCTGA
GTAAACTTGGAGTAAATTCTCGAACATTCTAGAACTTTCCAGTAATATAAATAGTAGTAT
AAATACAGGGGCCTTAAGCCCACCAGTTCAGTTTAGTTCCAACTGCCTTAGTGGATACAT
ATCTGGGATGCCATCAAGAGGCTGCAAGCATATGGCAGACGCATTTTGCTATGTCTGTGG
CCAATTTATCAAGATAAGAGCGAAAAAGTACTCTGTGGAAGCATCTGCTAAGATGTGTAA
GGCCTACAAGGCATATTTCGGCATGCCTGTTGGGGATCAAGACAAACCCTGGGGCACCTC
ATTTCACTTGCGAGCAATGGAAAAAAACTTATTTTTGTAGGATGGTACAGAGGGGAAAAG
AGAGCCATGAAGTTTGCTATCCCAAGAATTGTGCGGGAACCCTCTGACAACTCAAGCAAT
CACTACTTCTGCATGGTGGACCCTTCCAAACGTCGGACTGGCAAGAATGCACCTGCTATC
ATGTATCCGGACCTTCCTTCATCCATCGCCCCGGTGCCACACTGCCATGAGTTCCCTGTA
TCCACTCCTCCGGAGAGAGAGCAGCCGTCTTTGGAAGAGAGCAGCAAGCCAGAGAGCGAG
GAAGACATTGTAGATCCAGATGACAATTTCAGAGGTGGAGCTGAGGAAAAAAACCCATAC
TACTCCAACCAAAAAGACCTCAACGACTTGATCAGAGATCTTGGTCTCACCAAGTCCAAT
GCCGAGCTTTTGAGATCAAGGCAGTTGAACTTGTTAGATGAAAGTGTGCATGTCGCAGAT
CAGAGGAAGCATCAACCTTTTTGCAGCATCTTCACACTTCAAGATTGGCTCTGCTTCTGC
CGCAATGTAAGCAGTCTGTTCGAGGCAATCGGAATCGCCTGTAACCAGAATGAGTGGCGC
TTCTTCATTAACAGCTCATCCAGGAGCCTCAAAGCCGTGCTACGCCATAATGGTAACAAG
TACCCGTCTCTTCCCCTGGCTCACTCGGTGCACCTCAAAGAGAATTACAAAAGCATCAAG
ACCTTGCTGGATGCCTTGAAGTATGATGAGTATGGCTGGGAGGTCATGGGAGACTTCAAA
ATGGTAGCATTCCTGATGGGTATCCAAGGCGGTTTTACCAAGTTTCCCTGCTTTCTTTGC
CTTTTGGACAGTAGGGACACCAAGTTGCACTCCCACAGGCAGAGACTGGCCAAAGCGGAC
CGAGTTCTCTGTGGGGAGGAACAACGTCAAGTGGGAGCCACTGGTGGACCCACGGAAGGT
GCTGATGCCACCACTGCACATCAAATTGGGCCTTATAAAACAATTTGTCAGAGCTATAGA
TAAGGAGTAGGCAGCCTTCAAGTACCTTCAAGACTTCTTCCCTAAGCTGTCTGAGGCAAA
GGTCAAAGTCGGTGTCTTCGTCGGACCACAGATAAAGAAGATCCTGGAGTGCAATAAATT
CCCCAAGAAGCTCACTAGTAAGGAGAAAGCGGCTTGGGACAGCTTTGTCGCAGTGGTTCG
TGGCTTCCTGGGCAATTACAAGGTCGAAAACTACGTGGAGCTGGTTGAGACTCTGGTGAA
GAACTACGGCACAATGGGCTGTAGGATGTCCCTCAAAGTCCATATCCTTGATGCTCATGT
TGATAAATTCAAGGAGAACATGTGAGCATACTCGGAGGAGCAAGGCGAGCGCTCCCACCA
GGATATACTGGACTTTGAACGCCACTACCAAGGACAGTATGACGAGAACATGATGGGAGA
CTTCATTTGGGGGCTGATTCGTGAAAGTGATTTGCAGTATAATCGTAAATTTTGAAAAGC
TACTCACTTCTAAATTTTTTGTTGTAATTTTTTCATTACTTTAGTATAAATACATGTTCA
TTTTGATTTATATGTTGTTGTTTTCTGACTTTATGTGAACGAAAAAACACAAATTAGCCC
GTTTTCTCATTGAAAATAGGTCCATTTCAGAATATTATTGTCCTGGTCACAAAAGCAAAG
TTTGTGGGTAATAATAGTCATTTTCTATACTTTTTAGGCATAAGCAATTAGGAAATAACA
CTTCCTACCCAGGAACAAAAATTGTGTTACATAATGTTATCAGTTGGGTTATTCATAGAT
AATACAATCAATATACATAATGTATACATTTTGACTTAAAACATTTTCGTGACTGCAGGA
ATTAATATTCTTTGGTTCTTTTGGTAAAGTCGCGTATATAGAAAAGTAATACTAAAAATA
AAGTGAATAAAAATGATAATGAAAAAAATTAAAGATAAATAATTTTAAAAACATTAATGT
AGAATGTAGCCTGGTTCTTAATCGGCAGTGAGTGTACTGGCAGTCTATAATGTAGACTGT
AGCCTGGTTCTGAACCTCGGTGAGCACTGGCAGTCTATAATGTAGACTGTACCCTGGTTT
TTAACCTCGGTGAGTGTACTGGCAGTCTATAATGTAGACTGTAGCCTGCTTATTAAGCTG
AGTGTACTGGCAGTCTATAATGTAGACTGTAGCAATGGTTATTAAGCTGAGTGAGTGTAC
TGGCAGTCTATAATGTAGACTGTATCCTGGTTTTTAAGCTGGGTGAGCGTTTTGGCAGTC
TATAATGTAGACTGTAGCAATGGTTATTAAACTGAGTGAGCGTACTGGCAGTCTATAATG
TATATTTATTCTTGGGTTCTTTCGGTAAAATAATAAAAATAGAAAAATAAAAAGCAAAAG
CCACGACGTTTCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATT
GCGTTGCAATATCACTGTAGCCTGGTTCTTAACCTGAGTGAGCATACTGGCAGTCAATAA
TTATAGAACGCCAATGTACTTACCAAGCTTAAAAACCAGGCTACAGTCTACATTATAGAC
TGCCAGTACACTCACCGATGTTAAGAACCAGGCTACAGTCTACATTATAGACTGCCAGTA
TGGCTCACCGAGGTTAAAAACCAGGCTACAGTCTACATTATAAACTGCCAGTATACTCAC
CCAGCTTAATAACCATTACTACAGTCTACACTATAGACTGCCAGTACACTTGTAGAGACA
CAGTCGGATGCCTCTGTGGGTTACACAAGTCACGTGACCGGAAGCGTTCCTCGATTGGAC
GAGCTGGGGCCACGTGACTGGAAGCGGTGCGCGATGGGACGAGCTAGGGGCACGTGACCG
GAAGTGGGTCTCAATTGGAGGAAAGAGGGACACGTGGCCGGAAGAAAGGACATGTAGCCG
GAAGCAGGGACACGACTTGATCCAGCCAAGGAGCGGGGGGCCCGGGGGGGGCCAAGGGAT
AAAGGGGGATCGAGGGGAGCTTTCGGGGCTCACCTCGGGGAACCAACGACCAACACGCAC
GCACATAGAGAGCAGAAGCCTGGGATAAGTTAGCCATGCTTAGAAACAGAACTGGTGTAC
AGTAAAATATTTAATAAATACGTTGCCTCCTACAACAGTGTGTGCGCTTCAGTTGACACA
CTACACACTCACAAAACTTAATAACCAGGCTACAGTCTACATTATAGACTGCCAGTACAC
TCACTCCGATTAAGAACCAGGCTACAGTCTACATTAATGTTTTTATTTTATTTTTATCAT
TTACATTTTTATTCACTTTATTTTTATTCTTATTTTTCTATCTACGTGAGATTACCGAAA
TAACCAAAGAATATACATAATGTATGTACATCACACATATTATGGATAATATTGGTCTTG
AAAGCCTAAGTGTTAAATCCATGTGTCTTGTGTGTGTGTGTTTATCCCAATGTATCTCGT
GTCTCTCCCTATGCATCCTGAGATTTGTCCGTTGCCATGTGTCCCCATGTGCCTCCGGGT
GCATTTCGTCCCCCTCATCGTGTCCCCAAACCCCCCCCCCCTCAACTCCCCTTAGGGTGG
TCCCGCTGGGCGGGGTGACGCAGACGGTTGGCGGGCGCGAGTTCCGCGGCTTCATGTCGC
ACTCGCCTTGCTACCCCGTCGCCTACCTCAACGCCGCTGCAGCCATCGGCATGACGCAGG
CAGACGTGGGCGCCTTCGCGTCGCGCCTGTCCCGCTGCCTCGATGCGCTGCGACGCGACG
CGTGCAGGAAGAGCAGCGGCATCAATTCAGATGGAGAC
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