SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002169_2.0
Identity
TranscriptSelenoprotein U1 (SelU1)
SpeciesPetromyzon marinus (Lamprey)
Transcript IDSPT00002169
Transcript release2.0
External IDNone
Gene SPG00002076_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002169_2.0 # Transcript # Selenoprotein U1 (SelU1) # Lamprey (Petromyzon marinus) # Full length # Forward
ACACCACGTGCAGAGTCACGCAAGTTCCGTGCGGGGGAGCTGTGGCGGGATAGAGGTGCG
GTGGTCATGGCCGTGCGGCGTCCCGGATGATTTTTGTGCAGAGAGGTACACGCCACAAGT
GCACGTCATTGTCACCCCCTCGAGCGTGGGTGCCGGGACAATGTTATTTCACAAGAGACG
TGTAACGAACCATTGAGCCCCTATGCCTAAATGAAAACTTGCATCAAATTAGGGGCCGTG
GCATGGCCCAGCGGGTCGCATGTTCACCATTTGGCGCGGATGTTCGTAAATTTTAATTTC
AGTGGCCGCCCTGATTATTACTGCGGGTGTAATAACCACGTTAATACGCCGCGCTCTCCG
CTTCACAGTGTACGCTAAAGATTCGCGCGTGGAAAAACCAACAGCACTTTAGATTTTCCA
TGCCCTGTAATGGCCTATGACCCAATCATCCCGAAGTTAAGCGAGAGTTAAGCCTGGTAG
TAATTGGTTGGAAGACTGCCTGGGAATGCCAACACGAACACTTTTGTTGACGCCCCACAG
CTTGAGCTGCGAAGCAGCTAGATTACATAGAAACGGATTCTTCAATCCATCCGTGTGGAA
TTTCTCGTGTGCAAGGATGTTGCCAGCGCGTGCGCGCATTTTCCACGGGCACTCCGGTTT
CCTGCCACATGCCACTCACAAATTGTCCTCACATCCCAATGTCGGACAGCCCTGAAAAAT
CCCATTTTTGAAACGCAGTGAAGCTTTACTGGCTGAATAGAGGATTATTCACATTCAAAT
AATTGCGAGTTAAGTTATGACCCCTGAGGTTACCACATTTCATCTAAGCACAGAGGGGGT
AAATTACTACAAACCCTCAGGCAAGCAAAAGGCTCAGTCGCAGTCATGCATGGCGAGTGG
CCAATAGATTTGGTTCGGCGCCGAATGATGTGCGAAGTGAGCTGTGTTTGCATGTTGAAC
TTCTGTCGCACCGTACATAGCCAACCGTGCCGCTAGGAGGAAGGATGGTGAGTGGTACGT
GCCGTGTGCGGCGTCTGTGCTGTGCAGGAGGCGAGCCTCCTCTCTGCACTGTCCCCGTTC
CTCTCGGAGCACGACGTGCCACTGGCGGCTGTGGTGCACGAGAACGTGGGAACCGAGATC
AAGGACTTCCAGCCATTCTTCCAGGGCCAGGTCTACCTCGACCAGGAGGTTTGGCAGTGA
TGGGGGCGGATAGAGTTTTGAGTCATGCTCGGAAAACATAAAAGGAACAGCCTTGCAAAT
GCTTACCCATGCCACTGCTGGCAGGAGGGCCTCCACTAGGAGGGAGGACTGCAGCCTCTC
TACGGGGTAGTTTGGCCTACTCTTCCATGTTGGCCTGACATCATGGAAGTGCTCAGAGCA
TCCATACTTTTCTCCCTCCACATGGAACCTGCCCATCGACCGTGGTGAACCCATTTATAC
TGCTGGGGGGACAGAGGTGGCGGGAGGAGGTTATTTACCTTTCACCATTGTTTTAACTGC
AACGCTGGGAGGATCAATCAAACCAATCACTTCTTTATTGCAAGTGCAGAGCGGTAGCAT
CCTGTTATTTAGATACCATTTCAAGTGCAATTCGATTAAATATAATTTAGCCAATGCCCA
TCTGTAACACTTACCCTGTATTATTTCTCGCAGCGGAGGTTCTATGGACCCAAGGAACGC
TGGATGTTCTGGCTGGGCTTCGTGCGCCTGAGCGTGTGGCGTAACTTCATGCGCGCGAGG
GAGGGCGGCTTCCAGGGGAACATGCTGGGCGAGGGGCGCATCCTGGGTGGAGTCTACGTC
ATTGGTGCTGGAGACCAGGTGAGCTCAGGCTGTGTAGTTTTGTGAATCATAGCGATGTGA
TCTATTTATTCAGAAGAGCATACATATCTAAGACGCTTTGCTTTTAAGAAGAAACTACAT
TGAAGTTGGGAGTTTTTAAAATTCAGTGTCACCTGTGTTGTAGCTCCAATAATCCACCAA
CCCTTGCCTCTAAGGCGCTGCATTGAAGTCCTGCGGCCACTCCACTCGTGCTCAGGGGGA
GTGACCCGAAGCCATGCTTTTTGTCTGATTGTCGGCGACAAGCAGCAATGGTCTCCACCT
ACGTGTAGTCGGCGAGACTCGGCAGTGTCAGCATTGCCAAAAAGATTGACAACTCACGTG
GTATTGAGATAAGCCTGCAACAATCAAATTAGAGCGATCAGTATATGCATTATCAGCTTG
TCTTTTCACGTCTGGATAAAGGCCTTCCCACACTGTCGTGCTATTATCCATCTTCTGCAC
ATGAAACTGCTGTAACTACTCTTATGTCGATGCCATTCCATCGCCAGTCTTGTCCACGAC
GCATTAGACATTTTAAAGTAAAATAAAAGTTCTATGTTCCAAGATGCAAATGTAATTCAA
GATTCTTTCTGCCACTGTGCATTTTTGTTTCCTGCTCCTTCCCTTCCACCATTGCTCACC
CCCTCCCCCTTAGGGTGTGTTGCTGGATCATAAGGAGCGTCAGTTTGGAGACATTGTCAA
CAAGACGGCTGTGATGGATGCGGTGCGCAAAATCCAGCCCATCCTCAAAAAATTAAAATA
ACTACAAATATACGGGCGTTAACGGGCGCATCCTCCAAATCACCAGCTGAACTGATCTAG
AAGTCCATTCGCACCAATGCAATTTTCATACACTGGCAGCATTTCTGGTATTCAACACGC
TGTTTCCGGAGGCCATCGACTGGTTCAATATCTCAGCATGAATATAAACACGTTGTTAAC
AAACTGTCCACTATGTAAGGATACTGCAATTATAAATCTGCCAATAATGTAATTTGCACC
CCAATACTGGATCGTTTTGCAATGCTGTACTCTCGTGCACCATACATGCTTTTTGTATAA
GCAATGTGGGTCTAAAATGTTTACCCAGCTATTGTAATTAATTTAATTATCTAATGCCAA
GTTAGTATTAACTGAACGTCAGGGATTTTTCCCGTGCAGGCAGAACGTGTACACTCTGCA
GACCTGAAATTCGCTATGGTACCAACAGCAGCTCCGCAAGACCGTGTGCTCCTGTATCAA
TGACGCCTAAACCGTAAAGGGTTAATTATCGCTGGGGTTTGGACTGACTTCAACAGGGGC
CCACCCTTGGGGAGGGCAAGGTGGCATCATTGTGGTTTCTCAGGTGTCCATGCACACCAA
AGCCTGCTTGTGTTCGCTACGTTCCCTTGGTACCTTTGCCTTGTCTTGTGTGTCAATGAC
GAGCTGTGCCCTAAATTTACAGGACCGGTTCTGAGTATTAGCAGAAGATGGGG
Chart Advanced