SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002171_2.0
Identity
TranscriptSelenoprotein W (SelW)
SpeciesPetromyzon marinus (Lamprey)
Transcript IDSPT00002171
Transcript release2.0
External IDNone
Gene SPG00002078_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002171_2.0 # Transcript # Selenoprotein W (SelW) # Lamprey (Petromyzon marinus) # Full length # Forward
GGTGGCTGAGGGTACGAGCCCCGCTACCAGGAGCTGGCTGCCAACATCTTAAAGCAGGCT
CCTGGGGTGGAGGTTATTGGCCAAGTGGGCCGGTCAGGTACGTGCGAGTGTGTTAGTCTG
TGCAAGTCACGGTAAAATAAAACGTCGTCTTCAATTCTGCATGGTCTAGCGTTGTGTATC
TAGGCTCCTTAATAATGGCAGGTCACGGTCTTATTTGGGCACGCGTGTGCACCACGCATA
TTGTGAGTCTAGCCGATATTATACCGACACATTGTTATTCAGCATTCATTCTAATCTCAT
CACGAAGTAGCATCAGACACTAAAGCACGAGCATTGCACAATAGATGCATTGGCACAAAC
TCAAACCGCGCAGGGGATTTAATCCTGCAGACGCCACTTACCTGCACCAAGAGCTCGAGG
TGCCAGCCTCCAGGGAGCCCTCCAGTCACCACTCTCACTACTTTGCCACGACCAGTGGAT
TTATCCTCCTCCAATGCCCCCTCCTCTCGCGTGCGACTTCTGTCCCTAACCCCGATCCAA
CGGATCCATTGGCTGCGTGGATGGCATGGGTAGGTGACAGGCTCATGCGCGTGGCTTGTG
GGCCAAGGTGTGTACGTGCCCATTTGGGAACAGTTCAGCTCCCTCCCTCGCGAATTCACG
GGAGCCACGCCCATTCATCGCCAACCACACACACTCAACTCAGAAGGCATTTCTATCGCG
TCACGATGATCGTTTCTGTTTAACACGTAGGCTTTCGTGACCAATATCATCCATGAGGGT
TTTTTTGGGTTAGATTGCGTAAATATATAAATTTGTCGATAAAACCCGCCACCACCCTAC
AGCCAACTAGTAAGGGTTGTCACGTAAACAGAACGTGGCCAATTCGTCACTAGTACAGCA
CACTGGTGTGTTGGAGAGCCAAGCCACATTTACAATCTGAGTACAGCGTTTTGCCAGTCG
TTACAACTAGCTTCATCAGGCGACAGCCAGATTTGTGTAGAAGTCTGTTTCGTTCCTATA
TAAGGAACGAAACAGTTGCTTATATAGGAATGAAAGTGGATAATCGTTTCTGATAGTATT
TTATTGCTTTTCTTTAAATGCGTTGTATTGGTACCTCTACCAGTTGCGAGGAGCCTTTTC
ACCGTTGTCTGTGTCCTCCTGCAGGTAGTTTTGAAGTGACCATCAATGGCGAGCTCATCT
TCTCCAAGCTGGAATGCGGTGGCTTTCCCTTCGCCGAGGACGTAATTACCTGCTCTTATG
CACCCCTCTCCATTCCAAGCGTTCTGCTCAGCCTTGCCCTACCCACCGATCTATTCCTTC
CGAGCCCTCGTGTCCCACGTACAATGAGTTGAGAACGTATAACAAGGTGTGCCACCTTGC
CAGAGCTGGCTTGAGGCAAAGAATAGTGCTTAAGTGGTGTGATTGGCTGCCTTTTATAAA
GTGTTTTTGCGCAGTAACCAGTGTGGAAGCAGCTCTATAGTGACCACCTGCATACATTCA
GCACTTAATTTACAACTCTGCCTTCCCCATTTTCAACCCAAGGCTGTTGCTAAGTTTGTG
TGCCTGATGAACCCCACCTTGTACCTTTGCCTTATGGCTGCTCACACCTTGCTGTGTTTA
TCCCTGCTTTTTCAGATCATTGCAGAGGTGAAGAAGGTGCAGGGGGGCGAGAAGGTGGGG
AAGGTGACGAAGAGCCAGGCCCCGTGCGTCATCCTCTGACCACGATATTTGTCAGCCTTC
AGCTGTACTTGATTCAAACACTCTGCGTTCTGGCCAATGAAGGTTTAAACTGGAAATCAA
GTCACTAGTTTAAGCTGGAAGTCTTCCAGACGTGGTG
Chart Advanced