SelenoDB
Release 2.0
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Transcript Report for SPT00002256_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesProcavia capensis (Hyrax)
Transcript IDSPT00002256
Transcript release2.0
External IDNone
Gene SPG00002163_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002256_2.0 # Transcript # Selenoprotein O (SelO) # Hyrax (Procavia capensis) # Full length # Reverse
TGGATTATAGGCCTCCATAAAACCAAATGGACCATAGTCAATTGTAATGGCTAACAAACT
AAAGTTATCAGTATTACAAACACCTACAACAACAAAATATTTCAGAAACATCAGAATCAA
ATAATGTATTATCTTTTAATAAAATAAAATCATATAGAATAGAAAAGCTCATGGAGTTGC
ATTCATTGTCAACATAATACAAAATCTGATATCAACTGAAAGTTCAACTGGTGAAATCAA
ATAGCTTAATATATGTTAAAACTGTTATTTTAAAATTAAATTTAGCCTTTCATTTTTTAA
CTGCTTTCCCCAGAGATTTCAAATACTACAAGGAAAAAAGCCTCAAGAAATGAGATTTTC
TCTTTTATTTAACATCAATTTCTAGTATTTGCTTTACGGATAGAGACGCATACATTGAGA
CTAGAAAAGGAATAAAATTCATTAATTTTCAAAAATTGTGAAAAGGGGAAAACGATAAGG
ATACGTATTCCTATAACAGTCAGTGGCTTCAAGCCACTCTTACTGTGGGCAGGTGTGTGA
CCTCTTGGTGACAGACTCCCAGACAAGGGTAGGAGGTATGGTGGAGGATGTTCCAGAATG
GATATACAAGCCTAGCATAGGACACCTGGAAAGGGTAGCAATAATGTCTACTATTTCAAC
TTTTTGAGATCAAGATGGCCCTCTTTATCAAAATGTTAAAGGTACAGACTCTCTAACTCA
GCTACTCCCTGCCTAAGAATTTTCCTAAAAAGCACACCTTCAAGAAAGCAAAGATATAGT
TACATGAGGTCCTGCAGCAGTGTTAATAATAGCAAAACTCAGAAACACTACTCTGCTTCC
TACTCCCACTTCAGTGAGAGAAAGAGTCTACGTGTGAAAATTAAAGCAGATTTTCAAAAG
TTACCCATTTGGGATTTATCTAGAGAGTCTAGTACATCTATAATTTGTCTTCAGTCATGC
TTAGCTCTGGCAAATATTGCTTTTAATGCAACTCTAGGCAGTGCCTGGCTTTGAACACTA
CAAGCCAATTCTTCTTTTCACAGGACATACAATGTATATCATTAAAAAAGTTTAGAAGAA
TTGAGAGAAAATGGTTGGCAGGGATTACCTTAGGAAATAGGACTCCTACTCACTCCATGT
TTTAAATTCTTTACCAAAAGCAGGTAGTACCTTTTATAATCAGAATTTCAAAAATAGCTT
TAAGGAGATGTAAATACTACATAGTTACACATATGATCCTAAGAGCTTTATGGGTAATAC
TTCATCAGAGTGAAAATACTTATTCTATCTTGCATACTGTCCATTTAAAACAATTTTAAA
CATCAGAAAAATATTTGTTACTAAGTACAAATTTTTGTAATTAAAAGTATTAAATATCTG
ATGATACTGAGCTTCTCCATCATCTCTTTCCACAGATGTAGTTGATCTGATTCCTATGTA
TTACATCTGGTGGGGTACCCATGTATAGTCCCTGTATATAGTCACTGTTTATATTAGGGA
AAAAAGGTATTTTCAATGAGTAAGATACTGATTTTGCAAAATTCTTTCACGGGATCTGTG
TTGGTCTGGCACCAGAAAGATTATAAAATACACAAAAGAAACCCTCTACTTCAAAGTTTA
ATTCTACTTCATCATCAGAATGTAATATCAATAGATAACTTACCATGAGCAAAACCAACC
GACATCCATAAGGAAATAAGTTGTGCAGTCTTAGATACCACAACAGACAAAAAATTCTAA
AATAAAATTTAGAAAATCTTCAGATTCATGATCCTCCAAATCACCACATCAAAAGATTTC
AAAGATGTGTCAAAAGACGATTAAAGGAATGAAAAATAATACATGCAAGAAAAATGGAAG
AAAGTAGGATTACTCACCCAGAAGGAAAATATAAAGGGATTGGACACAGTATTATGACCA
TGTTTTCTCTGTCTCCAGTAAGAAAAGCAAAAAAATAGAATGGACCTCATAAAAAAGAAA
TATACTTGTACATCAAAGGATTTCATTTTAAAAAAACCAGTGAAAAGACAACCTATAAAT
AGAGAGAAAGTTTTCAGGAAACATATACCACATAAGGACCTAATATTCGAAATGTATATA
AAACTTCTACTACTTAACAAAAAATACAACCAATCCAATCAAAACATGGGCATAAGACTT
AAACACATTTCACCGAAGAAGATGTTCAAATGGCCAACAAGCACATAAAAAAGATGCTTA
ATAGCCTTAGTTATCAAGCAGATACAAATCAAAACCATGATCAGTTATCATCTCACCCCC
AATGGAATGTCGATGACAAAAAAAAAAAAAAAACAGGAAACAACAGTTGCAGAAGATGTG
GAGAAACTGGAACCCTCATCCATCCACTGTTGGTGGGAAAGTAAAATGGCACAGCCATCC
AGCAGTTCCTCAAGGGTTGAACACAGAATTACCCAACAATCTCAATCCTAGGTATATACT
AAGAAAAAGTAAAAGCAGGAAAGCAAATGGAAGCCTGTACACCAATGTTTACTGTAGCCC
TTTTCAGGACAGCTAAAAGGTGGAAACACCAAAATGTCCATCAACAAACGAATAGACAAA
CAAAGTGTGGTATATACATACAATAGGATATTATGTAGAGAAATGAAATTATGACTTACA
CCACAAAATGAAGAATAGTGCATCATTCTGAGTAAAGTAAGTCACAAAAGGACAAGTATT
ATATAATCTCAGTTATATGAAATATGCAAATACATGGAAAGCAAAGATTATTACTGGTTT
TCAGGGATGGGAGGGACAATAAAAGGGGGAGTCTGTGCCTAATGGGATAGAGTTTAAATC
AACGGTTGTAGATTATTTGGAAAAGGCTACAAGAATGGTCACATGATTGGAAGAATATAA
TCAGTGTTAACTGAATTGCACATGTAAAAACTGTTGAGATGGCATGTTTTCTTGTGTATG
TATTTTCACCATAATAAAATTATAAAAAGAAAATAATGTGTACAGTCAGGACACAGCAGT
TTTTCTTTCTCAGTATCTTTCAAATAAAACTTCTTATCTATGTCTTGTTTATGAAATGTT
AAATATCATAATTCTCTTAACAAAATGTCTAGAAGACTTCTTTTCCTAACTTTGTTATGT
TCTAAGTTGTAAACTCTGATGACAGCAGTCAACGAGAAAAAACAGAGGATTGTCACACCT
CTTTAAAACTTACCACATATCTATCAGGTTCTTTGACATCTACCGAGGGAAAATGCTCCT
GTATAATGAAGTCTAATAACGTCCTGGGGATAAAAAGGAGAGTGTATCAGTGTTCTTCAG
AACACTCTATCAAATATCAAACCACCTAAATCCACTCTCAACATTTCAAAATTTTTAATT
CAAAAATTAAAGCAACAAGATCTTTCTCCCTTAACACTAATTAAATACAGAAATGTGTCT
CAAAGATCCTATTAGAGTCTACCCTACTATGTTATAAAAGCAGGTTAATTCAATCAACAA
TCACTAAGCAGCTACTACATGCAAACCCCTGTGCAACTGCTAGGGAAATAACGACGAGAC
ACAGACTCAGACCTCAAAGAGCACAGCCTGTCAAGGGAGAAGAACATATGAACAGATAAT
AGTATTACAGAAATAAGCTCAGCAATAAAATTATTTTTAAAATTACAGAGAATGATTATG
TATGTATGGAGTGCCATGTAAGGCTTCATAAACCAGGTGACAAAAAAACTGGCAAATGTA
AAAAGTTAAAATATTTAAATATTATGTATCATGGACTGATCATATTTTTATTCCTTATTT
TAACCAATGATTCTGATTAACTGATTAACCACTGATGTTAAGAGGACATCCAGAAGAAAA
TCAGGGTTGTAGACATGCTTTGGGAATTACTAAAATTCAGTCAAAACAACAAGAGTGGGT
AAGAGCTTGTCTAGAGATAATCCTGTGGAACATCAACAATTAAGGCACTGGTAAAGGACG
TTACTTAGTAAAAACAGAGTAAGAGAGAAAGGTTTAAATAGATTTCAAACGAGAGAACAG
TGTTATGTTAGCCAGCGGAGGCATTTCAGAGGTAAAGCTGTCAACGGTGTGCATTAAATG
CCAGAGAGATAAATAAAATATGGCCACCTGACAAAATAATTTACTGGCATGATGAATAGA
AGTAAAACTGACTCAAAATGCAAATCAGAAGTTAGAATACCACAGCAAGANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAATTCCTCTTAAAGAGGAAATGTGTTG
TTTAAAGAAACATCTTGCATATAATGCTGCTTAGGGAAGATGGAATTTTGAAAGCACATG
TGCTGGCAGGCACCAAGAACCTCGAGAACGGTGTGAGCTGTACTGCACAACACAAGGGGA
AGAAATTACTGTTTTTGCTCCTTTGCCAACAGTCCCTCCTCGGTCTCATCCTCAGAAATT
GTTAGTGACATATACTCTGGTCATAAATTTGGTTTTTTGTTTGTTTTCCTCTTGCATAAG
GGACTGAATTTCACATCTGGGTCTCCCCACTGTGAAACAGACACCATCAAATATGTTAAA
ATGAGACTGCCGGCAAAGAACAGAAACACCTATGAAATCCCAGGAATTAGGAGGAGATTT
TGGGGTCTCTTGAGGCAGCAGATTTGACAAATCTGAGACACTTCCATCTAGGTCTCCAAG
TAGTATAAAGGCTATCAGCTGCAATGGGGTTGCATACTGGATAATACATTCCCTGAGAAA
GGGACGACTGGGTCTTATACTTCTTCTTTTTAATCTCCTAAGAAACCCACACAGTGCTAA
GCACATAAATCAAAAACCCAAACCCAGTGCCACTGAGTCAATTCTGACTCCTAGCCACCC
ATAAGACAGAGTGGAAACAGACTGCCACATCTTTCCCCGGTGGAGGAGCTGGTGGTTTGA
ACTGCCACCCTTTGAGTCAGCAGCTGACCACTTAACCACTATGCCACCAGGGCTCCATGG
CAGAGTTACAAACACTTATTAATTGAAATTCTTAGTTTTATTCATTAACAAAAAAACAGA
AAACTTCAGGCGACAGAAGGACCTACATGACTGGCAGGCTACATCAGCAGGAGACCAGAA
GGACCAGACGGTGCCTGGCCACCATCAAAAACAACCCTAACAGGGAACACAATGTCGAGT
CCTTGACATAGCATGAGAAAAAGAGGTATGGAAAAAAAAGAAAAGAAAAATGGTGTGCAG
GTCAAGAACTCTATTAAAAGACCAGAGTTGATGGTCCCAAAGCCTAGAGGTTCCCTGAGA
GCATGGCCCTTAGATTTGCTGCTAGCCCAGACCTGAAACCAGTACTGACGCCAACACTTC
AGGCAGAGAATAGAGTGGACTCAGGAACAGAGAGTGAGCATGTGGTATGTGTACTTTATG
GCTTTATATGTATATATACATATGTATATGTGTTTATGTATATATGTATATATGTATAAT
TTCTCTCATTTCCCCCCATATTTTTTAATGTATATACATATATATGTGTATGTGTATATA
CACAGACATATACATACGTGTGTGTGTATATATATGTATATATACATATGTGGTTGTCCT
ACTGGTTTCTTTCTAGAGGGGAGAGGAGTGGTTGGTGAGGAAGGGACACATGGCTGAGTG
GATACTGGAAGTAAAGAGGAAAAGAAGAGGGTGCTGGCACAGGGTGAGGACAGCAGAGTT
GCACACAGGCGGGTGCTCAGGATTTTATATGGAAAATTGAATTGAATTGCAAACTTCCAC
TTAATAACAATAAAAAATTAAAAACAGAAAACACTTAACTTCACAACACATAAGTAAAAA
TATTTTCCCAACTGTTTCTTGCCATCTAAAAAATTTAATTTTCTAACCTTAGTAAATTCA
GTTCACCATAATGAGTCAAAATTTCTAATGACCCAATTCTGAACCATGATTTTGCAATAC
ACAGCACCACTGCACCTTAAAAAAAAAATTATTATTTTAGCATAAAACCATTTTATGTAC
AATAGGCTTTTCTTAAAAGTGAAATTATTAAAAAGAAATTTAGCAATTGAATTTATCAGA
AACAACTGATTTACACCCTATGAAGGATAAAGGAATTTTTTATTGCTTTAAGCCTGATCA
TTTAGAATGGTAAGAATGACAACCCTTTTAGAACTACCAAGGCTTTCAGAAATACCAAGG
CTTTAACCTAGATAAAGGCTGCTAGGTTGTTAGGCTGTCATCATCAGATCGTCACTGCCT
CATTAATTCTGACTTTTCCCCCATACCTCATACTAAAATAAGGAAATTCATGAATTATCT
GTTCTGTATGAATCATACTGTAAGTGCCTTCCATTAGTGTAGCTAATTCAAAATTAACTG
AAAAAAATAAATGTTTGAACGTCTTCTAACTTACGCATGTACTGAAGAAATAAAATAAAT
CCATAATTTTATGTTTTTAGCCTTCTATTACCTTCTTCCTTAGTTACAGACATTACTAAT
ACAATTAGTAAATACAATTCAGGTTTCATTCTTAAAGGAAACACTATCAAGATAAAGGTT
ATACTAGGTGACACACTTTATGCATACCAAAGCAGAAGCTTCTTCTCTGCTGGTCCTACT
CCTCAGTGGGCCACAACTAACAGCTACTTCTGGGCTTTTCTTTGTGCTACTGTCTTCCAC
TTCAAACTCCACACTCCCCCTCCCCCATCCATACTGAAATCCTACCCAATCTTATGTTCA
AAATCTATTCCCACTTCATCCACAGAGCTGAAAAGATCTTCTCTCTACTGACCTCTGCTA
TTTTATTGTTCATTTTTTGGTGTGTTTGTCTTCTCTTTCTGAAGACTGTACAAGGTCTGA
CAATTAAGTTTGTGAACTCACTACTGTGTGCATACATTGGCAGCACTGTACAAACTAACT
CAGTAAAAGTTCATAACCTTTGTATACCAGTATCTCACAGCTGTGCTCATGTGAATGCGT
GGTAGTGTCTTAAATGAGTGGTGTTCATTATTATTGTTGCATATTTTTGTGTGCTGTTGT
GAGACTGTCAGAACTTGAAGTAGAAGCAACAAACAAATGTTCAATTTCTTGTCAAACTTA
GCAAGAATGGAAGTGAAATCAGGGATATGTTAGTCCAAGTTTATAAAGCCATGAAGAAAA
TGGCAGTGTATAAATGGATTAAATTTTTCTCTGAGGGAACAGAAAGCTTCACTGATGAAG
AGAGGTCAGGACTGCCAGTAAAGAGCAGAACTGACAAACAATTCCAAACATTCATCAAAT
TGTGCATCAAAATTGTCAGCTAACTGCAAGAAGCATAGCAGACCAAGTAAACACCAACAG
AGAAACAGGAAAATCTTAACTGAAAATCCTGGCATGAGAAAGGTGTGTGAAAATGGTCCC
AAAGTTGCTCTCCGATGAACAAAAGCAGAGGAGAGTAGAAGTTTGCCAAGATCTTTCAGA
GAGACAAGAAGATGTTTGGGGCTGTGTTATTACTGGTGACGAAACATGGGTGTACCAATA
CGACCCTGAAAGAAAGCATCCAAGTCCACAATGGAAGTCACCCATTCTCCATGACCAAAA
AAGTTCTGTCAGTCCAAGTCAAGAGTCAAAACAATGTTGCTAACTTTTTTGATATCAGAG
GGATTGTTCATCGTGAATTTGAACCAACTGGACAGTTAAACAAGTTCACAATTTGGAAGT
ACTGAAAAGGTATTTGCATGAAAAAGTTAGACAAAAACAACCTGAACTTTTCACCAACAA
CTCACGGCTCTTGCATCATGACAATGTACCAGCTCACATGGCACTGTCTGTGAGGAAGTT
TTTAGCCAGTAAACAAATAAATGTATTGGAACACCCTTTCTACACACCTGATCTGGCCCC
AATGACTTTTTTCTTTACCCAAAGATGAAGGAAATATTGAAAGGATGACATCTGGATGAC
ATTCAGGACATCATGGGTAATATGACAACAGCTCTGATGGCCATTTCAGAAAAACAAAAA
ATCACCAAACCCAGTACCATCGTGTCAATTTCAACTCATAGTGACCCTACTGGACAGAGG
AGTACTTCCCCATAGAGTTTCCAAGGAACGCCTGGTGGCTGTGAACTGCCAGACTTTTGG
TTCACAGATGTAGCATTTAACCACTATACCACTAGGGTTTCCATTTTAGAAAAAGAGTTC
CAAAACTGCTATGAAGGATGGACTAAGTAAGCACTGGTGCCAGTGCATAACTTCCCAAGG
GCAGTACTTCAAAAGTGACCATAGTGATATACAGCAATGAGGTATGCAGCACTTTTTCTA
GGATGAGTTCACAAACTTAATTGCCAGACTTCATATGTTCGTTTAGACCAGTGACTATAA
CATACATTTAGGACATGGGAAAGTATATTCTATTCTAAGATGGTAATGCTGGAATTACAT
CTTGAAGAAACACTGGTTAATTTTTAAGACTGCAAAGATGTCCAGTATCTACTGTTCTTT
AAGAATTCAGTCCAACTTCAAGCACTTAACTCAGTATTTAAAAAAATATTACCTCGCTCT
TTCTCAATGTTTCTGTTGTAAAACCGATCTCTCCATACACCATCACTTACAACCAGGCTA
AAAAGAAGAGAATCAAAGTTATGCTCCCTGTTCAAAAAGAACTCTACTCTTTCCATATCT
ACCTAACTGCCACTATGTGTGTAACAATGAAGACAACAGAACACACATTAAACTTTTCGT
AATATTCATAATTATAGACAAATGTGGAAACCCTGGTAGCCTAGTGGTTAAGTACTACAG
CTACTAACAAAAAGGTTGGCATGTGTCAAAAGCTATGTATACACACACATACACGCACAC
AATATCAAGAACATCATCTTCATGAAGTTACTAATATAATCAAAACCACTATCTAATGAC
CATCATTCTGAAAGAAACGCTATGCAGAGCACTTTATATCTCATTTATCCTTTACCATGA
AGGACATTCGGTATAGTCTGTTGCATAGGGAGTTACCAGAAGACATACAGTTAGTAAGTG
GAAGAGTCTGGTCTTTCAACTGAAGTCTGTCTGACACTAAAATCTTGGTCATTACGAGCC
TTAAAAAGGAAAAAAAAAATCACAATTTGCCCTTCAATTCCTCAATGAAATATGCAGAAA
AAATAAAATCAATTAAAGGCATTGATCAACATGACAAAAATCACTCTAGCATAGGTTGCT
CTCATTTTTTTCATAAACCACACCACTACTCTGTTAGAATAAAGTACTATTCTATCACAC
TAAATCAGCTGTCAAGAAGTACCTAAAACTCTAAGAAACTATAAAAAATAATCACACCAT
CAGAGATTTACCTGTTCAATTTACTGACACATTTCTGGAAGAAATATGACCCAGTTAGTT
AGCTTCAAGAAAGAGGAACCACCTTGCAGCCCTGCTGGTTGGAATTCCAAGATAGTACAT
AGCCTCACTACACAGAAATTCTCTTATGGAAGAACGAAGTACAGCTCTACCATCGCCATT
TCTGCAGGAAATAAAATTTAAAAGATTTCCACTTATAATTAAGGCAGTATCAATTTTTAT
TTAGATCAATGAAATAAAAAGTATCAAACTGTACCGAGAATAGGGGGTCTTTCCTGAGCC
TTTTAACTGGAGCTCCCATTTTTCACCTTTCCTTACAAAAAAAAAATAAAGAATTGAATA
TTAGAAAATTCACGTTAATATTTAACAGAAAAGCTATTTATGCAGGAAAATATGTAGTAC
CTGTTCATATAAATCCCAATAAGATGGGCTCTTCCATCTCCAAGCTGACCTGCCCATACA
CCAAA
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