SelenoDB
Release 2.0
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Transcript Report for SPT00002264_2.0
Identity
TranscriptSelenoprotein U1 (SelU1)
SpeciesProcavia capensis (Hyrax)
Transcript IDSPT00002264
Transcript release2.0
External IDNone
Gene SPG00002171_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002264_2.0 # Transcript # Selenoprotein U1 (SelU1) # Hyrax (Procavia capensis) # Full length # Forward
GAAATGTCTTTCCTCCAGGATCCAAGTTTCTTCACCATGGGAATGTGGTCCATTGGTGCT
GGGGCCCTGGGTGCTGCTGCCTTGGCCCTTCTCCTGGCCAACACAGATGTCTTTCTGTCC
AAACCCCAGAGGGCAACACTGGAGTATCTTGAGGACATAGAACTGAAAACACTGGAGCAT
GGTAAGTGGTGACCCACCAGTCTCAGTACTTTTCCAAGGCTCTGGGACTGAGGGTTACTG
TTTTTTAGTTTGGGTCTTTTTTTTTTCCTTCTAAACAGGTCTTTATTAAAAAGGTTATAT
ATAGCTAGCAGCATTAGGAAAAATTTTATAACACTTTTTAAATTGCCAATAATTCCATCA
ACATCTGTGGAAAGAGATGATGGTGAAGCTCAGTATCATCAGTCAGAACAAGGCCAGGAA
CTGGCTATGGAACTTACCCGTAAATTGCTCATAGTCAGGTTCGAGGTAAAGCTGAAGAAA
ATTATAACAAGTTCATGAGAGCCAAAATATGACCAAGAGTGTATTCCACCTGAATTTAGA
GACCATCCCAAGAATAGATTTGAACAGAAGACCAGATGAGTTGTGGGATGACATCAAAGA
CATCATACATGAAGAAAGCAGAAGATCATTTGTAAGACAAGACAAGAAATGGCTGTCAGA
AGAGACTGAAATTTGTTCTTGAATAGAGAGTAGCTAAAAGTGAACAAATGAAATGAAGCA
AAAGAGCTGAACAGAAGATTTCAAATGGTGGCCTGAGAAGAGAAAGAATTGTAATGAAAT
GTGCAAAGACCTGAAGTTAGAAAACTAAAAGGGAAGAACACATGCAGCACTTCTCAAGCT
GAAAGAACTGAAGAAAAAACTCCAGTCTTGAGTGCGACGATATTGAATGACTATGTGGGC
AAAACACTGAATGGCATGGGAAGCATTAAAAGAAGATAAAAGGAATACATAGGCACTATA
CCAAAAAATTGATTGATAGTCAACCACTTTAGGAGGTAGCATATAATCAAGAAATGATGT
TATTGAAGGAAGAAGTTGAAGCTGAACTGAAGATATTGGCAAAGTACCAGAATTAACTGA
ATACCAGTTGAGATAGTCTAACAAGCAGATGTAACACTAGAAGCACTTGTCTGTACCAGG
ATGTTTGGAAGACAGCTACCTAGCCAGCTGACTGGAAGAGACCCACACTATGCCCACTCA
GAAGAAAGGTAATGCAGCAGAATGCAGAAACTATTGAATAATATCATTAATATCACATGC
AAGTAAAATTTTGCTGAAGATCACTCAAAAGTGGTTGAATCAGTACATTGACAGGGAATT
GCCAGAGAGTCAACCCAGATCCAGATGAGGACGTGGAACAAGGACTGTCATTACAGCTGT
CAGATGGATCTTGGCTAAAAGCAGAGAATACCAGAAAGGTGTTTACCTGTGTTTCATTGA
CTATGCAGAAGCATTAGACTGTGTGGGTTGTAACAGATTATGGATAATATTTCAGATAAT
GGGAATTCGGGGACACTTAATTGTGCTCATGGGGACTTTGTACCTAGGTCATAAAGCAGG
CATTTAAACAGAAAAAGGAATACTGCATGGCTTAAAGTCAAGAAAAGATGTGTGTCAGGG
TTCTATCATTTCATCATAACTATTTGATCTGCATGCTGGGCAAATAACCCAAGAAGCTGG
ACTGTATGAAGAAGAATGGAGCATCAAGTTTGGAGGGAGACTCATTAACCACCTGAGTTA
TGCAGATAACACAGTCTGGCTTGCTGAAAGTGAAGAGGACTTGACGTACTTACTGATAAA
GACCAAAGGCCACATCCTTTGGTATTGATTATGCCTCAACATCAAGAAAAACAAACAAGC
TTATAACTGGACCAACAAGCAACAGCATGGTAAATGGGGGAAAATGATGAAGTTATCAAG
AATTTCATTTTACTTAGATACATAATCAACACCACATGGAAGCAGCAGTCAAGAAATCAA
ATGGCGTATATGCACTGGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTCTTCGCGTTTCATCAACGGCAGGGACAGAAGCAATTTCCACATAC
TCAATGTTTAGGACAGGGCTAGGCTTATTAAAATGAGAGGTCTCTTTTATTGCAGAGTAT
GGGTTCCAAAGCACTTCATTGTGCTCGTGAAGAATCTGTACATGGATCAAGAGGCAGTCA
TGTGAACCAGAACAACAGGACACTGCATGGTTTAAAGTCAGGAAAGGTGTACATCAGGGT
TGTATCTTTTAACCATGCCTTTTTGATCCATATGCCAAGCAAATAATCCAAGAAGCTGGA
CTATTGGAGAAAGAATCATTAACAACCTGCATTACATAGATGGCACAGCTTTGCTTACTG
GAAGAAGATTTAAAACATTTACTGACAGAAGATTCAAGACCATAGCCTTCAATATGGATT
GCACCTCAACATCAAGAAAACAAAAATCCTCACAACTGGACCAGTAAGCAGCATTGTCAT
AAACGGAGAAAGGACTAAGGTTGTCAAAGATTTCATTTTACTTGATTCCACAATCGGTAC
CCATGGAAGCAACAGTAAAGATATCAAAAGATGCATTTCATTGGAAAAATCTGCTGCAAA
GGACCTCTTTAAAGTATTAAGCAGTAAAGCTATCACCTTGAAGACTAAAGTGCACCTGAC
CCAAGCCATGGTACTTTTACTCACCTCATATGTGTGCAAAAGCTGGATAATGAATAAGGA
AGATAGAAGAATGGATAGCTTTGAATTGTACGTTGAGTACTGAATGTACTAGCAACTGCC
AAAAGAACTAACAGATCTGTTCTGGAAAAAGTGCAACCAGTGTTCCTTGGAAGCAAAGAT
ACTGAGACTGTGCTATCAGGATGGATCAGTCCCTGGAGAAGGACATCATGTTTGGTAGAG
TGGAAAGTCAACAAAAAAGAAGACCTTCAACAAGAGGGATTGACACAGTGACTGCAGTGA
TGGGCTTCAGCATAAAAATGATTGTGGACCTGGTGCAGGACCAGGCAGTGTTTAGTTTGG
TTGTGCCTAGGTCACTGTGAGTTGGAACTGACTCAACAGCGCCTAACAGCAAGAAGTTTA
TTGCTGATTTGGGTGGTCACACCTTACCAGTGGCACAACTGTGCTTATGGGGAAGCTCTG
CTGCCCTCCTGTGAGCCCTCGTGTTGCATCTGATGCTCAGTGGTATTTCAGCCATGCCTA
TGATGTGGGGCCAGCTTGTGTGAGAGTGTGGCAGGCAATCACTTGAGTTCCTCGACTGGA
TAGTCTTCAGTGTGGCCGTGCTGATGGAAGTCACTGTCCTCTATTCAGTACATTGAGGGA
AGGCTGGAGCTGTGCTTCTTAAAGCACAAAATGCTGGTGTTAGAGGGACACTGGAGTGAC
CTAAATCCGGCATTCCCAGTTTGTGGGTGGATAAACCAAAGACCAGGGCAGTCTGGGGAC
CTGTTGTAGTTACACAACCAGTTGGTGGCCAAGCCTCTATTAGAAGAAGAAGACCTGGAT
TCTGATATCACTGCCTATACAAGGAAGAACAGGGAGTGATATTATCCCTCTTCTGGAGAA
AATTCAGCCTGATCCTTGTTGTTATCCTTCTTTCTCTCACTGACTTTCCTGGCCCAGAGG
CATTCCTGTCAGCCACGTTGGACTCTCACATGCTTGCCCAGCTGGGCTGGTGAAGATCCC
ACTTAAACTGCTGGATACCCATGGTTTACTGCTATACCACACATGAGGTCACCTTTATGC
CTGTTATCTTACTGGATCCTCAGCTGAATCCCTGAAAAACAAAGTTTGTTTTTGTTGTTG
TTTATGCGAGTGGAAGAAGGCACAGAGAGGTGCGACCAACTTGTACTGCTCTTAGGACGT
ACATGAGTTTCTCGTGGCTGCCGTAACAAACTGCTGCATACTCGGTGGTTTAAAACAGCA
CAGATTTATCATCTCAGCATCCTGGAGGACAGCATCTGAATGAGTTTTGCTGGGATAAAG
TGCGGTGTCACAGGGCTAGTTCCTTCTGGAGGCTTTGGGGAGAACCGTTTTCTTTGCCCT
TCCAGCCTCTCGAGGCTGCCTGCGTGCATTGGCTCATGGCTGCGTCCTCCATTTTCAAAA
CCAGGAATGGCCACTCACGTCTTTTTCACATCACATCACTGCTGCAGGCACGTCTGCCTC
TCTCTTCCACGTTTTAAGCCCCTTGCTGGTGGTGTAGTGGTTAAGCACTAAGTCTGCTAA
GCAAAAGGTTAGCAGGTGCCCCTTGGAAACTCTGTGGGGCAGTTCTCTGACCTGTAGGGT
TGCTCTGAGTCAGAATCAGCTCAACGGCAGTGGGTTTAGCTTGGTTTGGTAGTTAACCTG
GATCCCTGGTAGCACAGTGATTAAGAGTTTAGCTGCTAACTGAAAGGTCGGCAGTCCAGA
TCTACCAGCCACTCCTTGGAAACCCTACAAGCAGTTCTGCAGTATTTGACAGGATCACTA
TGAGTTAGGATAGACTCCATGGTAGTGGGTTTGGTTCCTGGTTTGGTGATGACACAATAA
TCCAGGATGAGCTCCCTATTTTAAGATCAGCCTATGGCAGCCTTACTTCCGTGTGCAGCC
TAACTCTAACTGGCTGTGTCACCTAAACTGTTCACAGGTTCGTGGCTCCAAATATCAACA
CGGGAGCCTTTGTGACTTGCTCTTGTCATGTCAGTTAAACCTGAAATGTTTAAAGAGCAG
CTGCTATGTCAAGTTGTCACCTCTTTTCCTCTGCTCTGAACCATGCCCTGGCAGAGTATT
TTGTGAAAACTTGAGTTTCCAGAAGGATCCCGGGTGGTGCTATGAGTTACTTTGAATGCC
CCGGGAGGAGGTGTATAGCTCATTTTCCACTTCATGGCTTTGCACTGTGACACACCTAGA
GGAAAGAGCCCAGGAAAAGTAACTAAAACTCTCTAGCTCACAAGCAGCCACTTACTGACC
CTGTTTGACTCCACATTGCCCTCTCTGCTCTTGTGGCAGAGGTCACCACGCAGTGACACT
CTTCATAAGTGAACTGTAATCGGCTCGCCTTCATCTGCTGTGCTTTTTTCTTGTTCTAAA
AAATAAATAACAAACTAGAGGTGACTGCCAGCATATAGCAGTGTATTTGTACTGGAGGCA
GGCAGTAGTTCTTACACCAAATGTGGAAAAGTAATTTGTTCCTAAGGCTGAAGTTTTACC
GTGATGCAGGCAGTTTCGGTTGCGCATCCAGCATGTTTCAAGAGAGCCACGTCTGTCTGT
CTGTCCCACTCAGCCGGCTGCATTCTTCCCCAGTTGCCACCTCAAACTTTTCTATGTGGT
ATCTAGTGCTTTATGTATACGCAGCCATGTGCTAGATATCAAAGGATACCAAGGATACCG
AGAAATGGAAGCTATAGGTTCTAACCACAAGCACCTCTGGGAACCCAAGTGGCGATACTT
AAGTGAGTGGTAGCACTTGATTTCCTCAAAAATCAGCAAGGCGGGGCAGATGGGGTTGTG
CACAGAGAAGTGGGATGTTCACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCACAGTCTTTGTCATCAGGACATCTCTCCTTGTGGAAAGACAGCAAGCCTGGTG
CTGGGGAAAAGGCCTGACCACCCTTTACTCAGGCCCAGTTCCTAACTGAGACAGGCTTAT
GCTGGGCTGCACAGGCATTGATTGTTACGGCAACTTTGCTGCTTTTGTGTCTCTACAATT
GCTGGCTGTGCTTGGGGCTTGTGGGAAAAAGTGGGTGTCTGTTGACTGCAGAGCCATGGG
TGTGCACACCCTGAGCTCCTGTCTCCTGCAGGAAGCTGCAGACCTGTCCTCCCTGAAGCC
CAAGTTGGATGAGCTGGGTGTCCCCCTCTATGCAGTGGTGAAGGAGCTGGTCAGGACTGA
AGTAAAGGACTTCCAACCATATTTCAAAGGAGAAATCTTCCTGGATAAAAAGGTGTGTAT
GCAGAGCCCATCAGCTGTGGACTAACTGGAGGGGACCATGCTTAGCTGTCAGACGTTTGG
CCTAGGATGTTTCTGGCCCAGAGCTGGAGGCTGCCTCTCTTCCAGCTGCTCCGAGCTTGC
AGGGCTCCGCTAACTCCCTGCATGGAACAAGCATGACTAGGAGCTGAAATGGCTCCCCAC
ATTGGTTACTTAAGCCCCTCCTGAGGTTTGACCCCTGAGGCGAGGGACTAGCTGAAACCC
TGCTGGGTTCCTGCTGTGTTGCAGGCAGGGGTCTAGCACACAGCCTGACCGTAATTCATT
GGGCATGTGTCTTTCCTCTTCCCCGCCTCTCCAGACTGTAGGTGTGTTGTAACCGTGTCA
GACACAGGCACACTACCTGTCATTAATGAGAGGTCACAGTTGAAAGCTGCAGACCTTTTT
CCCTAGGTTGGGCCTGCCCGGTGGTTGGAAGCTGCCCCCAGCAGGGTTTTCTCTTTCCTC
AAGCAGGTTGAGGGTAGTCCTGGGGAGAGGGTGGGATCTATGTGTGTGTTGGGTAGAAAG
GAGAACATAAAGCAGGCTGGGTCTCTGCCTCAGGAGGAATGCTCTACTGGGGACCTTTCC
TTTGGGAAAGGCAGGCAGTCAGCTACTCATGTTAGCTCTGTTTTGTTCTGCAGAAGAAGT
TCTATGGTCCCCAAAGGCGCAAGATGATGTTTATGGGATTTGTTCGTCTGGGTGTCTGGT
GCAACTTCTTTCGGGCCTGGAACGGAGGCTTCTCTGGAAACCTGGAAGGTGAAGGCTTTA
TCCTAGGAGGAGTTTTTGTGGTGGGATCCGGAAAGCAGGTAAATTCCTAGATATTCACCT
TGGTTTCTGTGAGTGGGGTACCCACATGGGGCTGACTTTCCATCTTTCAGGCCTCTAAAG
GTTCTGTTCCAGACAGCCAAGGAATATGAAAAAGAAGACAAGGGAATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAGGGATGGGGT
GAAGTGCACACAGCCTTCAAGAGCAAAGAGAGAGGAACCAGGGGAATGGTGCCTTGACCT
CAGAGCATGTCTGCTGACTTGGGCATGATACTGGCGTTTAGCCTTGTCTCCAAACAGACA
GGGTTGGTCTGCTTTGATGGCTCTCGTTATTGACCTTGATGGTAGACTTTTCCTAGTTGA
GTTAGTGGGAATAAAAAGTCTCTCATTTGCAGCCTTATTTTATAATCTGTCCTTTAGACC
TTAGCATCTCCACTGCTTGTCTGTGTCACAATCTAGAACGATGTGGTATCTGATTGAACA
TAAACATATTTGTTGATTTTCTTAACTGTCTATCCGTGTTGTCCTGGTCAGGTATATTTC
GTTAACAGAGTGTCTTAGTAATCATGGTTACTGTAAGTGCCTGCTTTGTTCCAGGTACTC
ATACACATGACCTTACTTCTCCCAACCAGTCTGGAATGTAAGGTATTTTTAATCCCCATT
TACTTGTGAGAAAGTGGGCCTACAAAAAACCCACTGCTGACAAGTCAATCCTGACTCATA
GCAACCCTATAGACATCAGGAATAACTCAGTCAGAGACTCATAGCTAGTCAGCAGTAGTG
GTTTAATCAAACTCAGATCTGTCCAGCTCTGGGGACTCTGCCCTTTCCTGCACATAGCCT
ATCTCCAGATGCCTTCACCCCTTAGTGGGCAATTTCTTCAAGGCTCAGACTTTGCCCACT
GTGGCATTTGGGCCCCCACCCACTCTTCATTTCTGCCTCCCCACAACCCCTGGGCCAGGG
CTGGGCCCATCGGCCAGCCCCCTCTTGCCTGGCAATGACTAACATGATGCTCATGGGCTC
TCTAAGCTGGCTGGCATGCTACTGGTGTTGCTAGGTGTGTTGTTTGATTCTGTTGGTGTT
CCCTGGAGCCCTGGCCCCTCACCTGCCCTAGTTGAAGTTTAACTAGGTTGGCTGACTTTC
AGGACTTAATCTCAGTTTTTCCTGGGAGAAGCTGTTGCAGTCCCATGGTGGGGGGGGGGG
GGTACAGTGGAACTGCAGTCAGTCCTTTCTGTGGGGATTTCCTTTGTGTTAATAATCTTC
AAAGCAGTGATATATGTACTCAAAAGGAATTTTGAAAACAATAGAACCATAAGAAGCTCA
GCAACCAAATGGACCACTCATTAGGATAGAACTGAACATTGTTTTGTTAGGCTGTTTTAC
AAAACAGTATCTCACTAGACTAGATGTTCTGTTTTCATTCAGCAGTGTATCATGAACATT
TTCCCATGCTGTTATTATGTATTATTGTTCCATGTTCTAATGGCTGAATAATGCTTGATT
GAGCAAGTAGATTAAAAAAGCCTGATTTGCCTTCTTGTTATCACCACAGTATGGTTGGAA
CTTTCATAGCAAACGTATTTACAGATTTTTTTTTAATTTAAAAAGTTCCCAGTTTTACAT
AATGGTTCAGAAAACTTTAACAAAGATTCCTTAGTGCTGATCTCAAACACATCTTTTTTA
CCACTTTCAGGTGACCCTGGGATATTGTATTCTGTGCTGTAAAGCATTTGGCTTCATCAC
AAGTGAGCAGGCTCTAGTTTTATAGGAAGACTAAAGGAAAGAGTGCTCTTACTTTTCAGC
TAGTCTTTCAAATCCTGACCACTGAGCTCTACTTCCACACCTTCCGGCTCTTCTGCATTA
GCTTGTTCTGTTTCCTTAACTTCTGTGGACCAGCCAGGCAAAGTGCTGTATCATTTGTGC
AGCCTTCATGATCACCTTTGTGATGAATCACCCCTGACTTTCTACCTTCCAAGTGCTACT
CAGCAGCCCATGTATGGTGGCACAGCATGTTGTCTGTGTCTGCCTTCCCCTTAAGGGCCA
GCTCCTCATGGCGGGGCCAGGCTTGGTGTCGGTCTGTGTTCTGCTGCCCAGCACAGAGCT
TCATGGACAGCCGGCACTCCACATCCATCTTAGATGAGTGAACAACCCTTATTGAAGACT
GATGTCCCTCTTGTTTCCTTTCAGGGCATTCTTCTTGAGCACCGGGAGAAAGAATTTGGA
GACAAAGTAAACCTGGCTTCTGTTTTGGAAGCTGCTAGGAAGATCAAACCACAGACCTTG
GCCTCAGAGGACAAA
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