SelenoDB
Release 2.0
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Transcript Report for SPT00002352_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesRattus norvegicus (Rat)
Transcript IDSPT00002352
Transcript release2.0
External IDNone
Gene SPG00002259_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002352_2.0 # Transcript # Selenoprotein O (SelO) # Rat (Rattus norvegicus) # Full length # Forward
ATGGCCTCTTTCAGGGCCGCGTTCGGGGCCTCGCTCGCGGTTGCCCGAACCCGGCCACAG
TGTGTCGGCCTCGAGCTTCAGTCGTCCGCGCCCTGGTCCGCCTGGGCTGCTGCCATGGAG
CCCACGCCGCGTTGGCTGGCGAGGCTGCGCTTCGACAACCGTGCCCTGCGTGCGCTGCCG
GTAGAGACGCCACCGCCCGGGCCGGAGGACTCCTTGTCCACCCCGCGTCCGGTGCCGGGA
GCCTGCTTCAGCCGTGCACGGCCGGCCCCGCTGCGGCAGCCACGTCTAGTGGCGCTGTCA
GAGCCCGCACTGGCGCTGCTGGGGCTCGAGGTCAGCGAGGAGGCGGAGGTCGAGGCCGAA
GCTGCGCTCTTCTTCAGCGGCAATGCGCTGCTGCCGGGCACCGAGCCCGCCGCGCACTGC
TACTGTGGACACCAGTTCGGTCAGTTCGCTGGGCAGTTGGGCGACGGTGCCGCCATGTAC
CTGGGCGAGGTGTGCACAGCGGCCGGCGAGCGCTGGGAGCTGCAGCTCAAAGGCGCCGGC
CCCACGGCCTTCTCCAGGTGCGGAAGTCCCGGGAGTTCCCAAGCGATATACCCTTCTGCG
CGCGTGGGGAAAAGGAAAGGTGCTCAGTGGCGTTTTTGCCCTTGTTGGGGCAGCTGAACG
CCCAGAAAAGCTCCGTGAAGGGATTAGGACCTAGGCGGAGCGTCTTTGCAAAGGATTTTG
TGGAGGAAGGCAAAGAAGCAGGCAGGAAGTGCCGGTTGGCAAGATGGAGAAAACACGAAG
TTAGGGCCTGGGCTTACTTTCTAGCTGACACTCAGAGAGATCTCCATCTACCAGTTCTGT
CAGGTGGAGGGGAACACACTTCTAATGGCTCTCCGTTGTGTTTTCCTAAACACACCGCGG
ACTTTGGAGCCAGTTCCAGGAACGATACTGTTTGCTGAACATCTTGCCCAGAGACTGGTT
TTTCAGAAGCAATGTGTTCAACTGGTGTCCAGGCCTATTTTCTGGAACCATACTTAAGCA
GTATGCTTCCTCAACTTGCCCAACCTCTAGAAGACCCTTTTTATGCACCGTCTAGGGACT
CGGGACACAATCTGTTCCCGTACCCACCTTCTCTGTGACCATTCTCCCAAGCCTGCCAGG
CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTCTCAGGTTCCAGT
GGGGAGTATCACAAGTGTCTAAGACGGCCCTGGATCCAAAACCATACAGGCCCAAAGGAA
CAACCTTCCTCTTCCTCATCCTCAATTTTTTGTACATTGGTGTTTTGTCTGCATTTGTGA
GAGAGTTGGATCCCCTGGAACAGGAATTACAATTGTGAGCTGCCATGTGGGTGCTGGGAA
TTGAACCTGGGTCCTATAAAAGAGTAGCCAGTGCTCTTAGCCACTGAGCCATTTCTCTAG
CCCCAAGGAACTCTTTTTTTTTTTTAATTTATATATATATATATATATATATATATATAT
ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTATGTATGTAA
GTACACTGTGGCTGTCTTCAGACACAGCAAAAGAGGGCATCGGATCCCATTACAGATGGT
TGTGAGCCATCATGTGGCTACTGGGAATTGAACTCAGGACCTCTGGAAGAGGAGTCAGTG
CTGAGCCATCTGTCCAGCCCAAGCAACTTAACTAAGTCCTGCCACCCAGGTACAGACAGC
ACTTAGGGGACTCTGTTTTACACTACATGATTTATATTGTTTAGATGCTGGTTAGATGAC
TAAAAAACAGTACGTTTGGCTTCTCATCCTTCTGCTAGCCACTAACATGCCAACCATGAC
ATGTTGCCGCCAAGCTGTCTTCATTTCTCAGAATAGTTCTTCTTTATCTTCCCACCCCCG
AGCCAAACTTATGGTCTTATCTGGCACCCTGCTGCTCACCTGGACCAACCTTCTCAGAGG
CTCTTGGAAAGGAGCAGATGCCATACATTCCAGAGCTCATTTTGTGAGCAGCCTTAAACT
TGCATTTTGATAATTTATGTTCACCAGTTACCAAAGGAAAAGAAAAAAATCCTTATTAGG
ATAATTTGTTATTGAAAGGCTTTCTTATATTTAAATATCTTGGTGCTAAGAATCAAATCC
AGAGTCTCATTTGTCCTAGGCTACTACTGAACCACATATCCAGCAGTGAAAGGTGCTTTT
TTAAAAATGTCATATGCATCAGTGATTTGCCTGCATGTGTGTGTGTGAAGATGTCTGTTC
CCTGGAACTGGAGTTACAGTTGTGAGCTGCTGTGTGGGTGCTGGGAATTGAACCCGAGTC
CTATTACACACAGCAGTGCTCTTGACCGATGGGCCATCTTCTCCAGCCCAAACAGTGCTT
TTTATAATTCTTGAGTTATTCTTAGTTGATCAGCTAAAATGTGTGCTTGAAGTCAGGGAT
CCCTTTGACCCTTGCTTAGGTCTCATCCTTGCGTGTATGTCAGGGTCTCTCATCTCAACA
CTGTGCCAAGATTTGAGGCTGGGGTTGGAGGTGGTTGTAGAGCCCTGAGATGGGTAAGTG
GATTCTGCTCTTAACGAGACTCCAGCCAGGTTAGCATAGACTATGTTGTGCTGTTTTCGA
GACAGGGGCTTTCTACATAGCCCTGGCTGTCCTTGAACTTGCCATGTAGGCCTTGAACTT
ACAGAGATCCATCTACCTCTGCCTCCCAAGTGCTGGAATTAAGCACACATGCCTCCACAC
CAAGCTTGGTCTTAAACTTTTGATCTTTCTGTCTTCCATGTACTGGGATTACCAGGCTGT
ATGTAAGCAGCGTGCTCCATGAGTTCGGTCAGTTCCAGGCAAGGTCCTCTATCGGTTCGG
GTACCTAAGACATTATTACTCCTGCAAGGAGGAGCTATGGATACAGCCTGGCCAGGTAGC
CACTGTGCTGGGCATCCAATGTTATACCATATTCTGCTAAAAACAAAACAGGTCCAGTGC
ATAGGAAGAATTCAAATACAAAAACTACCCATAAAATGTAGATTTCTTTTGGGGATTTAG
CTCAGTGGTAGAGCGCTTGCCTAGCAAGCACAAGGCCCTGAGTTCAGTCCCCAGCTCCGG
AAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAATGTAGATTTCTTGCTT
TATCTTGTTCTCTAGGTCCCTGTGACTGGTGGCTCAGACCTTACTGAGTCTACCAGCCAG
ACATAGGCATGTGGTCATGTAATTTTGTTTCCTTTAGGGTTGTGACACGTGCAGCATGTC
CAGGAACTGCTTGTCACAGCACTACCCACTGTGTTCCCCTTTGGGTTTGAACAGCCTGTG
TGCTCTGAGAACCGACGGTGTCTCCTTACTGCAGATAGTGCTGGTGGGCATGCTGCATTA
ATTGCTATAGGAATTTTGTACAACACCTGTGAGGACAAAACTGCAGCCTTAAGGGAGTGA
GGGTAGGGGGGACTTGAGGAGGGACAGGGAAAGTGTCTCTTCACCTGGCCTTAGTCATGT
GATGGATACACCAAAGCTCTTGGGAAACTTGGTACAGAATAACCTCTTCCTGACCAGCCC
CTTGGCCTGTGTTTGGTTTCAGACAAGCTGATGGTCGCAAAGTCCTGCGGTCAAGCATCC
GTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGGATCCCCACCACGAGGGCCGGGG
CCTGCGTTACGTCTGAGTCTACAGTGATGCGAGACGTGTTCTATGATGGTAATCCAAAAT
ATGAAAAGTGCACGGTTGTGTTGCGTATAGCTCCCACTTTCATAAGGTAATGCTGGGGGC
CATGAGGCCTGTCTACATGCACTTGCTCACAGATCAGACAAGGTCCATGCTTGTGCAGTC
AGAATGTTGAGCCAGCTCCTAAACAAGCAGCAGCACCTGGCTGTGATCAGGAGTTAGCCC
CAGATGCCTCCTAATGCCCCTTGACTAAGAACTACCTAGAATTTCCAAAAGGAAATGGCT
TCATTAGTGTCACCATAAGTGGGCTCCTGTAGCCTTTTTCTTAATCATGCAGTGACTAGC
TCATTAGCCTGGTCCTTTCTGCACGCTCCTTCCTGTCTTGTCATCACCTTAGCTTAGTGT
CTAGCCCTGCAGGGGCTGTGTGAACAAGGAGGTGGCTGGTGTGACCCTAGGAGTCCCCAT
CCTGTGCACCCAGGCTAGTCTGCCATCAGGTACTCACCACTCACACCACACATGGCCAGC
AAGAATGGAAAGGGGTCAAAAATGGTAACTGCTGCACTGTAGAGGCCCTTTCCCCTGACC
CAGGTGACTTTAGAGGTCATCGGGTGCCTTTGTACAGCATCGATAGCACCACTGCCCTCT
GCCCTCTGATGATTGCCAGCATCAACCCAGTTACAGTTTTTAAAATATGTCAGCTGGATG
TGGTGGTGCACACCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAATT
TGAGGCCAGCCTGGTCTACAGAGTGAGTTCAAGAACAGCCAGGGCTACAGAGAAACCCTG
TCTCAAAAGAAAAGGCTCCATTCATGACTGATGTCCCTTGTGGGATGGCCAACTTGCTGG
GACACTGACACTTGTACATACTTCCTGTGGTAGAGCCAGCCTTGGTTGTCCTCACAATGT
GTGGAGTATACACAATCCTGTGTGGAGTTGGAGCTGGCAGAGTAGACAATCATGGTGGTT
TCTTGGCCTGATGACTCTCCCAACATCTGGAAACTGGAGGCTGACAGTTGGCCAAATTGA
ATCCTGTCTGTCACTCAGATCTGGCAATGCTCTCCCATTCTCTGGCCTACAGTCTTGTGG
CCATGGTGATTTTCTTTTCCTCACAAGGTGTGGTCCATTGAACACTGGGGTCTTTCCTGC
AGATTCGGCTCCTTTGAAATTTTTAAGCCTCCTGATGAGCTCACAGGGCGTGCAGGCCCT
AGTGTAGGACGAAATGATATCCGAGTGCAGATGCTTGACTATGTCATCAGCTCTTTCTAC
CCTGAAATCCAGGCTGCCCACACCTGCGACACAGACAACATACAGAGGAACGCTGCCTTT
TTCAGAGAGGTAGGCAGAGGTTCCCCACTGGCCATGGGTTGAGTTCGCCTTGCAAATATA
ATCACGATGACCAGGGACAAAGGGTTTTATCAGGTGTCCCTGAACTTTTCTGTTCCTTGT
TCCTACATCCAGGGCCCATGATCTCCCACAGCCGCATGACCTGGGCAGCCTGGAGGTACT
TAGGGGCTTTGTTGTTTTCAGACAGTTTTACTTAGTAGCATTGGAACTTCTATATGTAGA
CCAGGCTGGCTTCAGACTCAAAGATCTACCTGCCTCTGCCTCCTGAGTGTTGGAATTAAA
GGTGTGTGTCACTAAGACACCGCGGTGCTGAGTGGGCTAGTCTTAGAAGGAAGGATACAC
AGACAGAAGCACTGTTGAATGTGGGTCAGTGACCTTAACCCAGCATACTCACCTGCTATC
TCAACTTGGGGGGAAAAGAGCTGTGGACTTCCCCAGCAAGAGCTAGCCCTGTTTCTGTGT
GGCTTGTATTCTAATACACGTGACTGCTGCTGGTCAGCAGACTATCCCAAGCACATGTCC
ATGCGGTTGCACATGGGTCCACACCAGGTTACTCCTATTTCCCACCTCTGGCCCCAGGGG
CTGAAGATGTGGTGTGACAGCAGCCACGGAGCAGGAGGAACTGAGGCTGAGCTCTATGCT
CGCACACAGAAACAGATGGGTGATCTGGTCAGCATACACCATCCCTGTAAGCTTCTGCTT
TACAACTATACTACCTGGTCCCTGGGAGCTCCTATGCTCCTTATGAGGTGAGGCACAAAA
GGCCACTTGCTTGGGCAGTGGGAGCTGTGATTCAGTTCTGTACTTGGGACTCCTGTTCTC
CAGGCTACACTGGGACCTTATGTTCAGGGGCTGTCTCTGGTTGGGTCACTGGATGAGCAG
TTGTTGGCATTACCCTGTATCTCCCAGGATGGAGATAGACTAGCAGGTCTTAGGAAATAT
CATTCTGGACCAGGCTGCCTAACAGTGTGATGTTCCCCCAATATTGTTATCAGGTCTTCT
TCCTGGGACTTAAGTCTGTGTTGCTGGTTTTTATGGCTTACCCAAAATTAGTAGTGTTGA
AAAGAATAGTGGTAGAAATGGGACTTAAGCCCATATAAACCAACTCACCCAAAACATATT
CTGAAACACTGAGTGGTGAAGGGATCTCAGAGGGCCCTGCACTGAGGACCACTTACAGAA
AGTCCACTGGAATCCAGGAGGTGCACTGGGGTGTTCTGGCCTGAGTAAGGGCAGGTGGGC
AGCAGCTCTGCTCTGCTCTAGGTGACAAGGCGAACAGCACGGATGGTGGCTGAATGGCAG
TGTGTCGGCTTTTGCCATGGAGTGCTCAACACTGACAACATGAGCATCGTGGGCCTCACG
ATCGACTATGGACCCTTTGGCTTCCTGGATAGGTAATGCCCCCAGGGTTGGAAGTGATGA
ACCTTCTGCTTGTTGGCCACCTAGGAACTGGTCCCTGTGAGGGACAAATAACCAACAGCA
GGGGGTCATGGGTATGGGAGAGGAACAGGGAAAAGTGGGGTCTGTGTGGTGCTTGTGTCT
CTTTTTAATGTTTTCTTCTCAGCAGCGTCTGGTCAGCCAACCCTACAAGCAGAAATCAAG
TTTGTTTTGGAACTTATCATGTAATCCGGGCTGGTCTTGAACTTGTGATCCACTTGCCCC
AAGCTCCCTGATTTGATAGGTTTATAGGAGCACGCTATCATACTTTGCCTCCCGGAGTAT
TTTGAACAAAAAAGTGACCTTTTAGCAAGTTAGAACAAGTCCCTCCCCTGCCAGGCTCTA
AATGGATTAAAGAAGTGGGGTGGGGTGATGGCATGGAGGAGAGAGGACTCTACCTGGCCT
AAGGCAGTCTGGGTCTCAAGCAGTTTCCTCCCTGGCCTCAAGGCAGAACTGTTATGTAGG
CAAAAGCCACTCTAAAACACAGCGACGGTGTTGCCACAGGGGAGGTCACCAGCCCTCCTG
CAGCCTGCTTTCTCTACTCATCCTCTGATAGCACTTCTTTGTGTGGCAGGTATGACCCTG
ACCATGTGTGTAACGCCTCTGACAATGCTGGGCGCTACACATACAGTAAGCAGCCACAGG
TGTGCAGGTGGAACCTGCAGAAACTAGCTGAAGCCCTGGAGCCTGAGCTGCCGCTTGTGC
TAGCTGAGGCCATTCTCAAAGAGGAGTTTGACACAGAGTTCCAAAGGCACTATCTACAGA
AGATGCGTAAGAAGCTGGGCCTTGTTCGCGTGGAGAAGGAAGATGAGACACTTGTGGCCA
AACTTCTAGAGACTATGCATCAGACTGGTAAGCCACAGAACCCTGTCACTGTGGGAAAAG
ACTTAGTGTTCCCCCTGTCATTTCTAGGTGTATAACTCAGTGGCACTGAAGGCAGTCCCA
GTTCCCCAATTGAAATTCTGACTGCTCTAAATACTCTCCATCTACCTCCCCCAGTGCCAC
CATTCTGATTTCTGTGACTCTGACCACTCTAGGAACCTCAGTAGAGAAACTCCATAGGAT
TCATGTGTGACTGGCTTATTTCACTACCCAGAGGATTCCTAGGTCCTTCCATGTTGTAAC
ATGTGTCTGAATTTAACTCTTTTAATACTGACTATCTAGTTCATAGTAGCCCCTCAGGGT
TTTTAACTCTTACCTACAGTGCTACTTTGAACTGTGCACAGTTACAGTCTGGTTTGAGCC
CTGCTTTCAGTCCTTACAGCACAGAGTTAACAGGATTACTAGGTCATTTTCCAGCTTCCC
TCTGACCGCTCTGGATTCAGCACTGTATTGAGTAAAGTAGCTAACATGAGAATCCGTGCA
TGGTTTGTTCCTGGAGACAATATAGCCCAGGCTGGCCTTGAACTTGTGCTCTTCCTCCTG
AAGGCTGGGATTACATGCCCAGCTTGGTTTTTGCCTGTGTTAGCATGACTGCCTCAGCCG
CTTCCTCATGAGGTAGGGTCTCCAGGTGGCTCTGGTTGTTCTAGAACTCAGCATACACCA
AACTGGCACTGAGCTCAGAGATCGGCCTGCTGCTAGCATTAAGGGCACGAACTATACTGC
CGGAGCCGCTTTAGATCCTGTTTGCATGGATGTTTTTCTCTCTTCATTTCCCACACTCAG
ATCTAAAGCAGGCCTTTCAGAGACAGCAGTAAGGCTGAATCACAGATTTTTTTCCACCTG
TCAACCTGCTTCTCCATTGCTGGTGGACAGAATCCATTTACAGCAGTCACAATTCCTGAC
AAGTCTGCTTTTTGTAAGCTGTTTGGTTTGGTTTTATTTTTTTGTTTTTCAAGACCAGGC
TGGCCTTGAAATTCAAAGATCCAGCTGCCCCTGCTGCCCAAGTACTAAAGGGGAGTACCA
CCACCGCTAAGAATGAGGCTGGGCTGTAGTGACACACTTCTTTAATCCCAGCTCTTGGGA
GGCAGGAGCAAATACATCTCTGTAAGGTCAAGGCCATCCTGGTGTACAAAGCAGGCCAAC
CAGGGCTACCCAAAGAAACCCTGTCTTATAACAACCAAAAGAAAAGAAAAAGTCATTGTG
TACACACTACAGTATACATTGTAGAGCTATAGGGGCAGAAGGACAACTTGCAAAGAACTC
AGTTTTCATGATGTGTGTCTTGGAGATGAAGCCTGGGCCAGTACATGTGGCATCAAGCAC
CACACCCATCACGCAAACTCACCCGCCCTCGTTTGCGTTCCCTCCTATATACTTACTGCT
CAGGAGGTGCACTGAGGATGGTTGCCAAGTCAAGCTAGTAAGAGCCACAGTGTATCACAG
ATGTGTCCAGAGGCCCTGGGCAGGCACTGTGACCAAGGGTCCAGTGTCAGTCCGTTTTCC
AGGTGACCTACAAGGACCATCTAGGGGATGGGTGGGAGGAGTAGGGGCCAGCACGTGCCC
CTGGTGCCTGAGCAGCTCACTTTTTAGGCGCTGACTTCACTAACACCTTCTGTGTTCTGA
GCTCCTTCCCGGCTGAACCGTCAGACACAGCAGAGTTCCTGACCCAGCTGACCTCCCAGT
GTGCCTCTCTGGAAGAGCTAAAGCTTGCCTTCAGACCCCAGATGGATCCCCGGTAAGTAC
ATCCTCACAGTTGGTTTTCAGAAGGGGAGCAGCAGGGAGATTGGAGACTGCCAGTCAGAG
TGCTCCCCAAGTGCACCTGGGGCCCTTGGCAGCTACTCCCTTCCTGGGCATGAAATGCAG
TAAGGTCACATTTCTACAGCATTGAGGACCAGGACACTAACAAAAAGAAAGCAGGGCATA
GGTGGACTGGAATGGAGATGGAAGCAGACAGTGCCTTCCCACACTCACTATAGCCTACAG
GGTGTGCACACTATGTCCAGTGTGCTGCATTCATCTAAGAAGGGATATGGGAAATGATGG
CTTACAGGCTTTCAAATAACAACCCAGAGGCTGGTTATGAAAAAGGAATTTAGTAGGGAA
TGGAGCAGTAACCATCAAGAGGAACTGGCACTTGAGATTTGTAGAAACATACCTAGGAGA
GATGGTCCCCTGACCTAACTAATTTCCGGGTAGGTGTGTAGGAATTTGGGAAGTTGCCTC
AGCACCTGAGTCATGTGCTGCCCCTAGCTGAGGCACTTCCCCGGCCACCCCTCCCTGCAG
GCAGCTCTCTATGATGCTGATGCTGGCACAGTCGAACCCACAGCTCTTTGCACTCATTGG
CACTCAAGCAAATGTCACAAAGGAGCTGGAACGTGTGGAGCATCAGTCACGGCTGGAACA
GCTGAGCCCCTCTGAACTGCAGAGCAAGAACAGAGACCACTGGGAAACCTGGCTACAGGA
ATACAGGTAGGCAGCCCTCAGGGTCATCTGTACTGGCTTCTTGATACAATGGCCATCTTA
CAAGGTGGCTGCAGATGGCCCCGAATTGGGGGCATGGCACATGCTGTTCTTTGGAAAAAT
TTGATTCCAGAGAGCGTCTGGACAAGGAGAAGGAGGGTGTCGGAGACATTGCTGCCTGGC
AGGCAGAACGTGTACGCATCATGCATGCCAACAACCCCAAGTACGTCCTAAGGAACTATA
TTGCACAGAAAGCCATTGAAGCTGCAGAAAATGGAGACTTTTCAGAGGCAAGCGCACACC
TGTGCCTATTACCCTTCCTGTCATGGACATGCCATTAAATACGCTCCTCACCGAGTTTTC
TCACCTATCCTCTAGGTGCGACGTGTCCTGAAGCTGCTAGAGTCTCCTTACCACAGTGAA
GAGGAGGCCACAGGCCCTGAGGCAGTGGCGAGGACCACTGACGAGCAGTCTTCCTACAGT
AGCAGGCCTCCACTCTGGGCAGCAGAACTCTGCGTAACATGATCCTCATAAAGGCCTCGG
TGGCTCCACATGTCTGGAGTCTCCCGAGGCCTCCCCAGTGCTGCTGAGCTGCTGAGACCA
CTGGGATGCCTGTCCTCACGGTCTCTCCATGACGGCAGAGGTCTCCAGTCAAAACCTGAC
CCATCTCTGTCTGATACTACCTTAGCAGTACTGCCC
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