SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002360_2.0
Identity
TranscriptSelenoprotein U1 (SelU1)
SpeciesRattus norvegicus (Rat)
Transcript IDSPT00002360
Transcript release2.0
External IDNone
Gene SPG00002267_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002360_2.0 # Transcript # Selenoprotein U1 (SelU1) # Rat (Rattus norvegicus) # Full length # Forward
ATGTCTTTTCTCCAGGACTCAAGTTTCTTTTCCATGGGTATGTGGTCCATCGGTGTGGGA
GCTTTTGGGGCTGCTGCACTGGCACTGCTCCTGGCCAACACAGACATGTTTCTCTCTAAG
CCCCAAAAGGCGGCACTGGAATATTTGGAAGACATAGATCTGAAAACACTGGAGAAAGGT
AAGGGGTGACTTTGTGTACTTTTCCAGGATGGTAGGATACATGCTTAACTCCTTTAGATT
TCTTCTTAAAATCGTCCCTTTTTCTCGAAGCAATGTTATGGTGAAATCTAATAACAATTT
TAAATTACCAGGAGTTGTACCCACCTAGCACAATCATTTTTTATTTTGCTGTGTTCCTCT
CCTTGCTTCTGTAGTCACATAGAGGTGGTCTTGGTATTAATGGCTAATTCATCTTTATCT
TTTCAAAGTAATTTTTCACTCTCTGTTACTGTTGCCTTAACTGCCATGATAAATTGCTCT
GTAATATTTCGCGATATTTTACCATCACATAATAAGCCAGCTATTCCGGAGAGCATTCTG
AGGAATTCCAAGGCTTTCGAGATTGTCACAAAGAATAAAATAAATCGAACTGTCTAGGAA
AAATGAGCTCGAGAAACACCGTTCCCCCCATTCTGTATTCCTCATGCATGGTACAGGGCC
CGTGCACAGTAAGAAAATGCACATTGTAAAGGGGGATTTGGAGAGCTGGTTACTCTGTGG
TTACTCTGCCTGTGAGGAAGCTGCAGAAGAAGGGGGCCGACTTTAGGACAAAGGAGCCTA
TGTACCTGTCCTCAGGTGCTCACCTGTGAGCCCCACTCAATCATGCCCCCCGTACCCCTG
CCAGGTACACTCCCACATCAGTGCCCAGGCTCCGTGCGGGGGAGATTTCTTGGTAAACAT
TAGGGCTCACTGATCAGAAGGTCCTCTGGCTAGTGCCCCAGAGAAAAGCTATTCTCTTAT
ATCAGTGCAAGGTGAGGGAGCTGCCCTCGGAAGACAGGGGTGTGGTGGCTCACATTCATG
GCAGGTCACCTTAGAAAAAGCGCAGAGAGAGAGAAATGCCAAGGCTTTGTTCAGCCCCGG
TCTTAGAAATCTCATGTGACTACAACCTCCCTTCTTTCCTGTTTTTTCACACTGTATCCC
ACAAGTGCATGGTGACCTCTGAGGAATACTAAAATAATTAAGGTTAATCTAAAATGAGTC
CACACCAATTCTCCCAAGCACTTGCTCGTTGGGTGTCTTCTACCCTCTTCTAGTTACAGG
TATTGCACTTAAAATGTTTAGGTCATTCTTTTTTATTTTGAATATGCTTTTAAGAGTATT
TGTGGGAGGGGTATCAAATGCAAAACTCATTTTGGGCTCTACACAATTATTAGACTGACC
AGTGCTGCCAGCCATAAAAGGAATTTTAATTTTGCCAGATATTATCACAGTTTGGATATT
CGAGTTGAAAGTTGGCTTTTGTAGGGGAGGGGCTTTTCAGTGTAGAGTCGGATCCTGAGT
CTTCCCTATCAGTGCTTGCCTTCTCCTGGTCCCCTCCTAGGCTGGGTCCTGAGCTGAGGT
CAGCTGGACGTAGTTCAGGACCTTCTAAAAGCAGTTGAAGGAGGACTGGGCAGGCCGGAA
GGAAGCCATAACCATTTCTTCTCTCTCAGAACCAAGGACATTCAAAGCAAAGGAGCTATG
GGAAAAGAATGGGGCTGTGATTATGGCTGTGCGAAGGCCAGGCTGCTTCCTCTGTCGAGC
GGTGAGTGCCTTTGAAGATCTGTTGGAAGTAAAGCATTCAGGCAGTGGGGTCTGGAGTAT
TTCCAGCAGGACCAAGGGCTTAGGTGTGCTCCTAAGCAGTCTGACATTTCTGGATGCCTC
TGTTATTTGCTCTATGCATTTGTTTTGACATTGGCTCTGATCGTGTTTTTAACAACTCCA
AATACCCTGGTGGGGTTAGCCACACACGTCTCACTTTCTCTGTCCCTCAAGCCTTTTGCC
CAATATGGTAGCAGCTATGTCCTGCACTGCCTTTTCATCTAATCCGGGGCAGCAACAGGA
GAACATTCTATTGAGAGTTCCTATTGGTCCGCATGGATGCATACTTGTTGAAGTAAGGGT
CTAATCCTCGAGGAACGCTCCCTGCCCACTTTCAGCTGTCAGCTTCCCTCTGACAAAGGT
GCAGCAAGCAGGGACCTCCTCTAGGAGGCGCTTTAGAGCGTTCCTGTTCCTTGGGATCCA
CCATAGTCCCTTTCCACTCTAGATCATGAACTGCTCTTTCTCCCCTCTTGCTCTCACAGA
GTGGGCGGCTACGCAGGGGTTCAGTCATACCATTAGTGCGGATGCATTTGCCTGTAAGCT
TGAGTGATGCTGAGGCTTATGTACAGTGTGGCTCCAGGTCAGCAACTCAAGAGGAAGCCA
TTCCCGAAACTGAACACACGTATTAGGGCAGGAACTGTAGTTATTTTTTTTTTCCTTTTC
TTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCACTCTACCA
CTAAATCCCCAACCCCAGGAACTGTAGTTATTGAGATGCAAAATGCTAATGCAACAAGGA
ATTTTACTGTGGCCTGAGCCTGACCTTGTCACTCCATAAATGAGTAAAAAGAGGGCAAGG
ATAGTTCGAAGACGGCCTGCCCAGGTGGTACCAAAAGCCCCAAGTTCTGAGATAATTGCT
TTGACCAGGAGAAAAATGGACTGGGGTTCTCTTGCCTTGAAACCACTTGGCTTCCCAAGT
AACAAACACCCTTGGCCTCGTCGGGGTTATCACTCTCATTCCTCTGGAAGCCTGAGTCAA
CCCTAAGAGATCTCCTTCTGCCTCTGTGTGTGATAAAGAATCCACTGACACTATTGAGTG
CACACTTTGCAGTGTTTTACCTGCAAGGCACCTTTTTTCCTTCAGTTTTTTAAGACAGGA
TCTCATGCAGCCCAGGCCGATCTCTCATTCGCTAGGTAGCCCTTGAGTTTCTGATCTTCT
CCTCTCTGCCTCCTGAGTTCTGGGATCACAGACGTGCACCACCACTGTGTCATTTTCTGT
GATGTTGGGGATGGAACCCAGGGCTTTGTCCACGCTAGACAGTCTGCTAACTGAGCTGCA
TCCCCAGGCTGTGCACAGTTTCTCAGGGTTCTCTTAGAAACGCAACCTATTGTCACCATT
CTCATTTTACAGAATTTGCCCCAAAGCCAAACTGCCTGCTTAGTGTGTTTTCAGTTACAA
CTGCTGGGACAAAATGACACACGTTTGCTGGTTTTAACAGCAGTCAGCGTACAGGTCTAG
AGTTCTGTTTGCACTCCCCCTGGAAACTGTAGTGGAAGTTCATGTCCTTGTCTCTGCACC
CTTCCAGAGCCCACCAGTGTTCTCGGCTTGTGAGTTCTCCCTCTGTTTCTAAAGTCAGCA
ATAGCTGCTCAGATCATTGGTACATCCCATCCCTCCAACACTGACTTCCTTCCTCTCTTT
TCCACATTTAAGACCCCAGTGATGGAACTGGACCTGTCCAGTTAACATAGACCCCTCTTT
CTTTAAGGTCAGGGTGATTGGCAAGCTAACTTTCTGATCAGTCTCAGTCCCCCCCCCCCC
GTCATGTGACAGGTCACAGTCATTTAGACTTGGCCAACTTGAGGGGTTCACTATTTTCTT
TCATGCTGGAGATGGAGTGTAAGCTGCGGGCTTTTAATTCCATATCTGATATGCCTCCAG
ACACCATCTGGGAAACTGCTCTGACATGATCTGTTGAAGCCAGTGATACAGAGAACTTTC
CAGGAGCAATGGCACTTCCTAATTGCAGCCTGTTCTCCGGTGTTCTGCTCTGTGCCCTGG
CACAGCGTCTTGTGGAAACTTACAGGGTCCAGAAATGTGGGTGGATAGACGTGTGTGAGT
GGCTTAACAGAGGAGATATATGACTCTGTTCCTCTCAATAGCTTTATATAGCAACATCCC
CAGAGGAAAGGGCCGGGAGAGCAGTGAACCGCATCTCCGGCAGGTGGTCTTCAACCACAT
CAGACACTGTAGCCCCTCCCTTCTGTTGTACTCAGACTTTGCAACTCAGTCGCATTCTTG
GTAAATATGTTACAATCAGTGCTGTTCTGTCTAGCTTTGCTTGTGCTTCTTTCTGTTTTG
TTCTTGTTATAGAAAATATCCTCTCACTATATATATATATATATATATATATATATATAT
ATATATATATCAGAGGTGGGCAGGCTACACTTAAAAGAACTTCCTGGTGGTTCTTTAATT
AGGACCTCTAATGTGAAAAGCTTCTTAAGCGTTTCCATGATTCACGGGGTATTGTTGATT
CTTCCAGCACACGGTTCACGAGGATCAAGGATGTCTGTTCCACTCAGCACAGCCACACCC
TCCCCTTTTCCACCTTCAGCTCCTTCTACCAAGGGTTTAGTGCCTTCCGTATAGCCGGCC
ATGTTCTAGACACTGGGAATGAAGCAGAAGACAGAATTTCTTATAGTAAGGCATGCTTTG
GAACCTGAGTGACCGTGTTCGTTGGTGACATGAAGACCTAGCACCAAAAAAGCCCCTGGC
AGAAAGCACAGAACATGCTTGAGAAGTAGGACAGGTCTGGGAATCTTTCTAGAACAAAGA
TACCATTCCAGTAGGTTAGACTAGAGACGGAAAGAGAAAGTTCTAGCAGGGACTGGGGGG
AGAGGAGGGCTTTCACAGAAGCTTGATTCTGGAATTTTGTTACCTTTGTCTCTCCGCTTA
GTGTCAACCCTGGGCCATGGTTTGTTTCTTGACTGCTGAGCTGTGGGAGGGAGCTCATGT
CACTGAACCTTCCTGTCTTCCACAGGAAGCAGCAGATCTGATGTCCTTGAAGCCCAAGCT
GGATGAGCTAGGTGTCCCTCTCTACGCAGTGGTGAAGGAGAAGGTCAAGAGGGAAGTGGA
GGATTTCCAGCCTTACTTCAAAGGGGAAATCTTCCTGGATGAAAAGGTGAGCGTGTTGTG
GCTTGCAGAGACACCCCAGTGCTTAAGAGTTCTTCCAGAGGAACCACATTCAGCTTCCAG
CACCCATGTTGAATGGCTGACCTTGGCCTGTAACACCAGCTCCCTGGAATCCAGTGTCCC
CCTCTGGCCTCTCGAGTACTTTGCTCAGTTGCGTAAACGCACACAGAGATGCTCTTAGTC
ACATAATTAAAAATAAAACACAGAAAGAACGAGTGTGTTACAGGCTTGTGAGCCCTGGGC
TGTATGCTGGTGGGACTAGTTTCTCAGCTGGGAGAGGTCACTGACCTAGGGTAGGTTTGT
CCTGGAGATGGAGGTAGGCCTCCCCCTTTAGTTTCCCTGAACTTTCAGGGTCCCCCAGCT
CTCAGAGCACAGCACAGGCAGACTCTTGAAAGTCATTCTCCATTGTTACTGAAGCCTCTT
GTCAGGTGACCCAGGAGGGAGGGAAAGAACAGAAGATCCTTGCACCATAGCCAAACCCTT
GTCCCTTAATATATGCAGTTACCTCCTTTGTTCTCTCTCCCTACAAGATGTTGTAAGGAC
TGTGAGAAAGCACATGGTGGCGGGTGGCAGGAGCGGGTGTCTCAGATCGAAAGGGTCTTG
AGAGCATACGTTGAACCCAGTGGTAGAGGACCCACCTAACATACATGTACAAGGCCCTGG
GTTCAAGCACTACATTACAAAAGCAACGTGAAATTAAATTTAATTTTTTTTTCATATTTT
TCCTTTTCCTTTTCTGTAAAGAAGTCAGAGCTGGCAGCTTTTTTGTTTCCCTAGGCAGCT
GAGTGTGACCCTGGGAAGAGAATTACACGTATTACTGCAGGATCCGGGGCTTTTGGCTCT
GGCTTCCTTCTTGGGGCTGAGAGGCATGCAGACTGCTCACGTGGGGTCTTCCTTGCTCTG
TAGAAAAAGTTCTATGGTCCAGAGAGGCGGAAGATGATGCTTATGGGCCTCGTGCGTTTG
GGTGTGTGGTATAACTCCTTCCGGGCCTGGAAGGGAGGCTTCTCTGGAAACTTTGAAGGC
GAAGGCTTCATCCTCGGAGGGGTTTTTGTGATAGGATCTGGAAAGCAGGTAAGATCTCGG
TATTTACTACAGACCTAGGGGTTTGGAATTGAGGCTGAAGTAGGGGCGTGAATCTCCACA
TTTAGCGCCTTCCGTCCTTCCTCCCAGCGTCGTCACTGGTCACACATCTTCCATAGGCTT
GCTTCTCATACATGCACTCTAAGTCAGGTCACCAGACAGTCAGGATGCCTGGACTGCAGA
CCGAGAGCAGTTGGGCAGCTGGACCAGTGGGCTTAGTCCAGTGTGGTCCTGCAGAGGCCT
GAGCCTGACTTCCTGTTTCAAGCTGTGTTTCAGTTCTTGCCCAGGTAGCTCACTTTTATT
CTGTCTGTGAATATACACAATTGGCCATGTCCCCCAGCCATCAAGGACAGATGTGGAGGA
AAGTAAAAAAGGGAGAAGGAGTAGAAGGAATAGGTGGGAGCGTGTTAGGAACGTATGAGA
GTCCTGTGGAACTCTTGGTGTCAGGACCGTGCCTGGGGAGAAAACGATTCTCCTGAACAG
GGTGTTAGGAGTCCTGGCAATGAGGACCCAGAGTCAGTGTGAGGATCCTGAGGAAGGGTA
TGGGCAAGAGAGATGAGGTAGGTCCTTGTGGGCCTGGGAGGCAGACGAGTACTCCACGTG
GGCTTGGGGCTTTCAGTGGACAGTCATGGGTCACAGGAGGACCCGGAGACAACAAGCCTG
CGTGGAAACCATAGAATCAGTGACATGCACGTGTGTGGGGTGTGGCTGGACTTCTGCTGT
TTTGTTTCTGTAGAAAAGCAGCCTCACTCTGCATTGTTAGATCTCCCAACATAAAAGAAG
TCAGAATAGGAAGCTCGATTTCTAATCTTAAAAAAAAAAAAATGTGCTGGTAATCGTTCT
TACTCATTTGTATTAGAGTTTAGCATTAAATGGTATCTAATTTGATGTAGTTCTGTCTCT
TGACTTCTAGTAAGTATATCAAAGCGTTGTAATAGGAGTGGCCACCAGGCACCTGCCTTG
TTAGAGGTGCCCGTTGGTATGGCTCCATATCTTCCTATGCCCCACCAGCAGTCTGGGAGG
TTCGTTTCCTCATTCCCATCTACATAGAAGCGGACCAGACATGGCTGGTGAGTAGCACAG
GAGAAATTAAACTCAGGAACCCAGAAGGACAGCACCCCACTGTGTGTACAGGTTATCTGC
AGACGTGGCTCTCAGTGACCTGGTCTAGGTGACCATAGAAGGTCTTTTTCCTGGTCTAGC
CCCGTGGCATTTCATTGTCCTACCTTGGCCTCCTACGGTGGCCTCTAGGGCAGGGTTTGG
TACACCTGCCAGCCTTTTCTTGCCTGGTGGTGACTCACTGGGTACTCATGGCCAGGCTAG
CACATTCCTGGTGTTGTTAGGTGTGGTGTTTGTTGGTCCCCTCAGAGCTGGCAAGGTAGT
GGGTGAGCTGGGTTGGCTGGGCAGCAACCCTAGTTCCTCCTGGAGGCATTTCTGCAGTTA
TGTCAAGTGCCTGCAGGTATGAACTTTTTAAAAGTGACTCGTGATGCCTCGCTTATTGTA
AAGAATATAGTAACCTATATTCTTTACGCCTATGCTGTGTAGAGAATCTAAAAACAGCAA
AATAGTGAAAAGCATGTGGGGCCTTCGTAGGGGGTGCTGAAGGCAGCCCACTAGAACAGA
GCTGGGTGGCAGTTGGTTGGTCTCTCTCTCTCCACAGTGATGACGAGTGTTTCCCATGCC
ATCAAACATTCTTCCCCTGATTTTTCACTGTCTGCATTTGACTTACACAGTAAACAATCA
GTTTCCTTACTCACTTCCTAATGGTCAACCTAATGTGGTGGACTTTTCTTTATTATTTAT
TGGAGTGTGTGTGTGTGTACGTGTGTGTGTGTGTGTGTGTGTGTACAGGCATGTGCACAT
CATAATGTGTGTGTGGAGGTTAAAGGACAACCCTCAGGACTTGGCTCCCTCTCGCCTCGT
TGTGCAAGACCCAGGGATTACCCTGGGGTCATAAGGCCTGTATATGGCAAGTGCCTCGGC
TGGACAAGCCACCTCACTGACTGGACTTCCTCTCTTTTTCCTGTTTTCTTGTCTTTATAA
TGACAGGACACATTTCAGATTATTTGAAATTTAAGACAAGTGTCCAGATACCACAGTGAA
TTAAGACCTCAAGCATGTCCTTTTATCATTTCACTACCTCACAGTGACTTTAGAATGTCC
TCTATCTTGGTGTGTTTGATTCACTGTGTTAGAAGTGTGACCCCAGTTTATGAGGTTTAA
AGAAAAGAATGGGTCTCCCTTCTCAGACGGTCCTCCAGCAGCCATCGAGGTGGCCTCTGA
GCGCTGCTTCCTAGCTGTTTTCTGTCTTCATTCTTTTTCCTCCAGATAGATTGTTCTCTT
ATCTGCATGAAGCCTTCCACATACCTTTGTCTTAATTAACTAGCTTCATTTGTCCCAAGT
ACTGGGACATGACTGCTTCAGTCCCCTTCCTCAGAAGACCGGACAACTCAAGGGAAGGTG
CCGGGTTTGATTCAGATCTGAGCTCTCAGCCGCCCAAGCGCAGGACTGACGGACAGCTGG
TGCTCAGAGTCTGTTTCATGAGTGAACACCTCTGAGTAGAGACTGACATCCCTTCCTGTT
TCCCCTTTAGGGCGTTCTTCTTGAGCACCGAGAAAAAGAGTTTGGAGACAGAGTGAACCT
GCTCTCTGTTCTGGAAGCCGTAAAGAAGATCAAGCCACAGACCCCAGCCTCCAGGCAAAG
C
Chart Advanced