SelenoDB
Release 2.0
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Transcript Report for SPT00002495_2.0
Identity
TranscriptSelenoprotein U1 (SelU1)
SpeciesSus scrofa (Pig)
Transcript IDSPT00002495
Transcript release2.0
External IDNone
Gene SPG00002402_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002495_2.0 # Transcript # Selenoprotein U1 (SelU1) # Pig (Sus scrofa) # Full length # Forward
GAAATGTCTTTCCTCCAGGATCCAAGTTTTGTCACCATGGGAATGTGGTCCATTGGTGCG
GGAGCTATAGGGGCTGCTGCCTTGGCACTGCTTCTGGCCAACACCGACATATTTCTGCCC
AAGCCCCAGAGAGCAACGCTGGATTATCTGGAGGATATAGACCTGAAAACACTGGAGAAG
GGTAAGCAGTGACCCCGCCAGGGTCAGTACTTTTCCAAGGCACTGGGATGCAGGCTTACT
TTTTTTTTTTTTTTCCTTTCCGAAGTAGTTCTTTTTTTTTTTTTTTTTTTTAATTGAAAG
GGCAACATAACATTAGGGAAAATGTAATAAAAGAACACTTTTAAAATGACTGATAATTCC
ATTACCCTAACACAGTCATCATATTTATTTCTGCACATTCTTTTCCAGGTATGCCCATAA
TATGTAGTTGTGATCTTGGTGTACACGATCTTTTACATTTCAGCTTTTCCTTATTAAAAG
CATTTTTCATTTTCTCATGTTGCCTCTCTAAATGTAATGACAGTTGTTTTATAATGTTTA
GTAATATTGTAGTACTGTTTACTTAGCCAAGGCTTCTAGAATGTGTTCTGAAGATTTCCA
GTTTCCTGGATCTTGACAAAAAGGAGCTCTCAAGTTAAATAAGTTTGAGAAACACTGTGT
TTTGCTTACAGAAGTCAGGTGTCTGCATTGTTACTGGTACAGGCACGATCAGCCTCACCT
GTAGAACAGCTGCACCATCCGGGGAGGCACAGGGCCACACTTTTAGAGTGGACCTCCCTG
TCTACCCCCTCTTCGTGAGCCCACCTGGGGTCCCTGCTGGACAGCTGAGAGCCTCATAGA
TGCTCGTGGTGGTGTCTCTGCCTCGCTCTGCTCTCAGCCTTGACTCTGCAGCTCAGGGGG
TTTCAGTCATGTTGACAGCATGGGCACAGCTGGCATGAGAATTTGGTGCAAGTTGGGGCT
CAGTGACTGCTTGGTCTCCAGGTTGGCGCCTCAAAGGGAGGCCATTGCTTCTTTTCAGTA
AGTGAGGGAGCCTGTCGGGGAAGTCTCGGGAACTGTGACTGCAGATTTATGATGTAGGTC
ACCTTAGTAAGGGGCTAAGAAGCCCTGCAGGGAGAGGGAGCCCTGTTTACCTAGGTTCAA
CCTGGACTTTCCCAATCTCAGTTGATTACAACCTCCTCCCATCTTTTGTTTCTACATAAT
GTCCCACAGGGACCTGGATTCCTCTGAGAAATGGTAAAATAATAATGGGTTCATACTTAC
CGAGCCCTCACTGACTGTATTACCAGCCACTGCAATGAGCACTTTTATATCCATCTTATA
ACACTCCCTGTGGCCTGAAGTGGAGCTGCTAGGCATCTGCATTTGCAAATGGGGAAACTG
AGATTCAGGCAGGAGACAGAGCCTGCTCAGGGTCACATCTGGATGCAGACTCAGTCTGAC
CATGGAGCCTGAGCCAATCTACTCTACTGCCCCAGAGCACTTCCTTGTTGGGCCTCTTCT
ACCCCCTATGGATAAGATTGCAGTTAACATATTTAGGTAAACTTTTCTTGCTTTTAATTT
CTGTTGACCTAATTTCTTTGAATAACTTTTTTAAGAGTTAGGGTTTGCTTGACCAAAGTA
CAAGATCTCATTCAAGTTTTGGCCACGTATCTGCCCTAAAGGATTGCTACATGGTCCACT
GATACCAGCAAAGGAATATGCTGTTTTTCCAGAAATGTTCCAGGGGGATGGTCAAGGGCC
CAGCTAGATATTTATGGGGGAGGGGCCTTTGGGTTCCTTCCCACAGTAGGATCCTTATGC
TATATTCATTTTCCTCAGGCCCTGTGTTTCCTATTTGCTTTTTCCCACATCTGAAATACC
TTTCCAGGTCCTCAGTTAGGCCTGGTGCTATTTATGAGGTGCTTAGAGGTTAGAGTTGGA
CGGGGTGGAAAAGATACCAAATTCCTTCTTCTTCTCCTCAGAGCCAAAGACTTTCAAAGC
AAAGGCGCTCTGGGAAAAGACTGGAGCTGTGATTATGGCTGTGCGGAGGCCAGGCTGTTT
CCTCTGTCGAGAGGTGAGTGGCATTTAAGGGTCTGTTCAGAGAAAGGGATCCCAGCAAGT
GGCCAAGAATCTACTTACATTACATGATCCCTATTGTACCACACATTTAGGGTACTTCCC
GTTATCTTGTTGGTTCCCCACCATATCCCTGGAAAATACAGCTCGTTGTTGTTATTCTCA
TTTTACAGAGGAGGAAACTGAGGCACAGAGGTGGTAACAGGGTCACACTTCTGTGGGGGC
TGTATTTGGTTCCTATTGCTGCTATAACACTTGATCACATGTGGCTTTACATAACAAATT
AATTTTCTTACAGTTTCTTTCTTTCTCTCTCTCTCCCTTCCTCCCTCCCTCCCTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCT
TTCGTGCCTCCCCCATGACATATAGAAGCTTCAAGGCTAAGGGTCAAATCAGAGCTACAG
CTGCCAGCCCATACCACACCACAGCAGTGCGGGATCTGAGCTGCATCTGCGACCTACACC
ATAGCTCACGGCAATGCTGAATCCTTAACCCACTGAGCGAGGCCAGGGATCGAACCTGCA
TCCTCATAGATCCTAGTTAACCTCTGAGCCACAAAGGGAACTCTGTATTTTCTTACAGTT
CTAAAGGTCAGAATTCTCAAATGGGTCTCACTGAGCTAAAGTCAAGTTACCAGCAGGGCT
GTAATCCTTCTGGAGGCTCCAAGAGATAAATGATTTCTGTGTCTTTTCCAACTTCTAAAA
GCCATCTGCATTCTTTGGCTCATGGCCCCTTCCTCCATTTTTAAAGCCAGCAGTAGCTGG
CCAAGTCTTTCTCACATTGTGTCACTATGTCACCGACTCTTCTGCTTTCCACCCCCACAT
TTAAGGACCCTTGTGATTCTGCATTGGAACCATACAGGTAATACAGGATAATCTCCTTTA
AGATCAACTGATTAGCAACCTAAATTTCATCTACTGCCTTAATTCCCCCTTCCTGTGTAA
TAAGACATATTCAGAGGTTCTCAGAATTAGGATGTGGACATCCATCCTTAGAGGGTGTTA
TTCTGCCCACCACAGGAGGTGACATTTCAGCTCAGGGCTTTTGAGTCCAGTCTGTGATGC
CTCCAAATACCCACATGGAAGCCTGTTGTGACTTGATTTCTCAAACAGTTAAAGCCAAAT
GTTCCAGGAGCAACTGCTCCAATTATAACCTGTTTTCCTGGGCTCTAGTCTGTACCCTGG
CAGAGCATGTTATAGAAACTTATATTTCTAAGACGATAGTTGGATGGCAGGCAGTTATTT
TTAGGGAGGAGATGTGACTCAGTTTCCACTTTACACACCTACAGCAAAAAGTCCATGGAA
AGCAAATAAAACCTTTCCTCTCACATACAGGTGGTTTTTGATCATATCAGACCTTTAGTG
CTCTCTGCCCTCAGACAAGGTTTGCTACTTGCTGAAATGTCTTGACAAATGCATTGTAAT
GAATGCTGCTTTACTAGCTATCCTTTTGTCAATATTGTTCTAGAAAATAAATGAAAAATT
AAATGTAGTTACCATTTTATAGCAATGGTGGTGAGTGAGCTGCTTTTAATTGTGTTTCTG
CCATTTCTTTAACTCTGACACCAAATGTGAAGAAGGAATTTGTTCTTAACTTTGGAACTC
AAATGTGCGGTTTCATTTGCTCATCTAGCATGCATTCCTGAGAGTCAGGGATGTCTGTAC
TCACCAGCGTGGCTGCGTCTCCCCATTGTTCACCTTCACCTTAACATCTTTCCACCTGGA
ACCTAGAGCCTTCTGCATCTCCAGCCCTGCACTAGGCACTGATACTGAGGGATATAGGAA
ATGGAAGAGGGCAGGTTCTAACAGACACATTTGGGAACTTAAAGGACCATGCTCAACTTA
GAGGAACCCATTGGACTTAGTACAGAAAAAGTCATCCAGCAGGAGAGATTGGATACATAC
AGAGAATCAGAATCAGGCCTTCATTCCAGGACAACTTTTTTGGCGGGGAGGGGGGGGGGC
GTTGTGCCCACAGCATCTAAAAATTCCTGGGCCAGGGATCTGAACCTGCACCACTGCAGC
AACCCCAAGCCACTGCAGTGACAATGCTGAATCCTTAGGCCACTGCACCACATGGGAACC
CCAGGGAGAGCTTTTTAGAACAGGGATCTATTTCTAGAAGGTAGAATTTGAGCTGGAGAA
AGAAGGAAGTTTATTGCAATGGGAGGGAGCTCTTGACAAGGCCTGCATGGAGTTGTCTGA
TAAGCCCTTGTGCTAGTTTGCTCTAATGCAGGGGAGGGGCTGTGAAATTAGGACAGAGGC
ATAGAGGCTAGGAGTGGAAGCTGACTTGAGTGCAAGCTCTTAGTTATTGGATGCTACTCA
GGCCATAGTTAGGACAGCCATAACAGGAGCCTAGCCTCTCCTTCCCTCCATGGGTAGGAC
AAGAAGCCTGGGCTGAGGAGGGGGCCTGACACCCTACCCTGAGGCTTGGTGTCCACCAGC
TGGGATGGTCTCCTGGGCTACACAAGCCTTAATTGTTCCTCGCGTTTTGTTGCCTTTGTT
CCTCCGCATTTGGAGCCGTCCTCATTCTGCCAGTAGGAAAAAGATTGCTGGTTTCCCTGA
CCTTCCCTGTCGTCTGCAGGAGGCTGCGGACCTGTCTTCCCTGAAGCCCAGGTTGGATGA
GCTGGGCGTCCCCCTCTATGCAGTGGTCAAGGAGCAGGTGAAGAATGAAGTGAAGGACTT
CCAGCCTTATTTCAAAGGAGAAATCTTCCTGGATGAAGAGGTACATGTGCTCTGAGCCTG
TCAGACACAGACCGCTGGGGATTGCATGCAAGCTGGAGGATTCTGTGACCCCCAGAATGT
GTTTGGATCGGACCTGGAGCTGGCCTTCTTCTCATCTGCCCCCAGCACTTTGAGCAGAGC
ATGAGCGAACATTTAAAAGCTGTCCTTCAGTTAGCACTTGAGCCCTTCCTGACTAGTGAC
ATGGGAATGCAAGCCTTGGAAATAGCTGAAGCTCTATCAGGTTCCCCTGCCCTGTAGGTG
GGCACCCAGCATAAGCCCCTGCCCCTTAATTCATTGCAGCCAAATTTCTTTCCCCTCTAC
TCACCTCTGCAGAATGTAGGACTATTATCACTGTCTGGCCCAAGAAGCCTGTAAGTCTGT
AGCAAGAGATAGAGTCAGAATTGCAAGCTGCAGGGTTCTGTTTAGCTCAGGCAGTTAAGA
GAGCTCCTGGGTGGGAACTGTGGGTGTTGGGTGGAGGAGGATGGGAACCATTAGAAAACA
AATGCCCTGCTGGGAACTTTACCCCACAGCAAAGGCAGGCATTCAGGCTACTTACATGGG
ATCCATTTTCCTCGCTCCTACAGAAAAAGTTCTATGGTCCCCAAAGGCGGAAGATGATGT
TTATGGGGTTTGTCCGTCTGGGTGTCTGGTACAACTTCTTCCGGGCCCGGAGTGGAGGCT
TTTCTGGAAACCTGGAAGGCGAAGGCTTCGTCCTTGGGGGAGTTTTTGTGGTGGGACCAG
GAAAGCAGGTAAATTTCTAGTGTTCTCTTGGGGGGTCTATAAGCATAAGACCCCAATGTG
TGTGGGGTAGGAGGATGACTTTCCCTATTTGGAGTCTCTCAGCCTTCCTTCCAGAAAGCC
AGAGAGCATGAGGAAGGGGAAGGGAGGGAAATGATCACTTAGCACATGCCTACTCCCTCA
GCACCCCGCGCATGTGTCCCCTTCCTCGTCACAGTAATGTCTTGACCTGTCTGGCAGGTC
TGAGAGTCTTGCAGGTAAGTAACCTGTGAGGGGCAAGTGGCTGCACCAAGGAGGATAGCT
CCTCAGTGGCACTGCTGGAGGCCGGGACCCAGGTTTTTTGATGTCAAGTTCTTTCCTGTG
CTCGAACAAAACCGTAGTCTTTATTCTGTCAAGAGTTTACTTCCTTGCAGTGTTCCCTGT
CATCCTTACAGTGTTCCCTGTCATCCAGGATAACAAGGCAAAGAAAAGTGAAGAGAAAAG
AAGGATTGGGAAGGCCTCATTGAGGGGTAGCAGGGAGCTGTGGTGGGAGGCGGTCTTTCC
CTGAGGGATCCTGGTGGCAGGGCTGCCTCTGGAGAGGTAGCAGACTTCTCTACAAATAGG
TAGTTTGGGGTCCTAGCTGTGGGGATCCAGGGTCTGCAAGGGGGCCTAGGCGGGTGTGGA
GAGATGAGGTCTCCGTGGGCCCAGGAGGCGGGTGGGTGGTGCTCCATGTCAGACTCAGGG
CATCACCAGCAGAGGCCTGGTCAGCACAGAGTGAAGACAGGGTACGATGGCTGCAGGCTC
AAGGACCTGGCAGGAGGATCCAGAGGCTTGGGGTCAGACTTCTAGGCCTGTCTCTGCCAA
CCTTGGGCATGACATTAACACTTGGCCTCACCCGTAAAAACAGGGTAGGTCTGCATGGTG
GAGCTCACTACTGACACTGATGACTGCATGCATTTTCCAGCTGCAGAGGACCAAAGCTAG
TGGGAATAAAAAGCCTTCAATTTTAAGCCTTATTCCAAATCTCTTCCTTTTTAAAAAATT
GTTTTTATTATTATTATTTTTTTTTTTTTTTTGTCTTTTTAGGGCCATGCCCACAGCATA
TGGAAGTTCCCAGGCTAGGGGTCAAATCAGAGCTGCAGCTGCCGGCCTACACAGCCACAG
CAACACCGGATCCTTAACCCACTGAGCAGGGCCAGGGATTGAACCCGAGTCCTCATGGAT
ACTAGTTGGGTTCGTTTCTGCTGAGCCACATGGTAACCCCCAAATCTCTTCCTTTTAAGC
CTTGGTATCTGCTGTTGCTTGTCTATATTAGCATCTAGCATGAATCATTCTGATATATCA
TAAACCTATTTGCTACCTTTCTGGTAAATACATCAAAATGTCTAAATGATAATGTCTGCC
AGGGAGTGCCTGCTTTATGCCAGCGGCTTTTACAGACACACACACACACGTACATCATCA
CATGTCTTCTCTATAACCACTTTGGGATGGGAGGTATTTTTATTCCCATCTACATGTGAG
GAAGTGGCCTAGAGATATGAAATATCTCAGCCAAATATACTCAGCTAGTAAGTGGTACCA
AGGAAATGAAACTCAGGAACTCAGACCTGTCCTGCTCCGGAGAGCCTGCCCTCCTCTTAC
CCGCAGGCCCTTTTCAGAGGTGGTTCCCAGAGACTCCTTCCAGGTGTCTTGCACTTGGAC
GGGCCACTTCCTCAGGTTCCCTCAGCCTCTTGCCACTCCAGGCCCCTGCATACCTTTCCC
TATGCTGTCTCCGCCTTCCTTCAGCCCCTAGGGCAGGGCTTGGCTCACCTGCCAGCCTCC
TCTCACCTGGCAGTGACTCATCTGGTGCTCACGGGTTGCCCAAGCCTGGCTGGCTCGCTC
CTGGTGTTGCTAGGTGTGTTGTTTGACTTTGTTGGTGCTCCCTGGAGCTCCTGCCATCTT
CCTTCCAGGTGGAAGATTGACCAGGCTGGCCCAGCTTCGGGACTTACCTGTGTGTTTCTT
GAGAGCAGAGTTTTTGCAATCCCACTGTGCCAGGTGCCACTCAGTAGGGATTTCCTTTGT
AATAATAATCTTTAGAGTACACTTACTTTAAAGAAATAGTGTGTTCAGCATAGGAAATTT
GAAAATGGAGAAGATGGGGAGAGCCATTCTATAAGGCCAGCTGTCAGTGACAGCCTGTTA
GAACAAAGCTGGGTTGAGAGGCCTTTTGTTTTTTTTTTAGAAAATGGTAAGTTACTAACT
AGATGTTCTTTTTTTACTTAACAGTATATTCTGAACATTTCCCCAAATCATCATATGTTC
TTCCTCAGTGTTTTTAATGTTTGCCAACTGCTTTACTAAGCAAGTAAATAGTTTCCAATT
TGCTTCCACAGTGTGGTGGGACTTTTGGGGGTTTTTTGAGGTCTTTATAATGGTAAAATG
AACATATTTTTTTGACTTCCCAGATGTCACATTTCAAAGAACTAACACAGATCTCGAGCA
CATTATTTTATCTTTATACCACTTTAAGGTCCTTTGGGCTGTACTTCGTCTTCAAGCATT
TCACCTCACAGTATCAGAAGTGAGTGACCTCCAGTTTCATAGGAAAACCCAAGTAAAGAG
AGGGTCTCCCTTTTCAGGTGGTCATTCAGTAGCTGACGGGGTCTGATCTCTGAGCTCCAT
TTCCATACTTCCAGGCTTTTCTGTGTAACCTCATTCTGCATTCTTTTACCTGCTCCTCTA
CCTGTAGACATGCTGATAACTCACTGCCCGTGCTTTATCATCTGGGAAGCCTCTCTTGAC
CACCCTGTTATATTAATCACACCTGACTTCTGCTTCCAAAGTGCTGCTTGTACCATCCAA
ATATTGTGAGGGAGCTTCCCCTGATCTGTTTTCCCCAAAAGACAGAACTCCTCAAGGGCA
GAGCTGGGCCTGATCTCTGTACCCTGCTGCCCAAGCACAGGACTTGATGGACAGCTGGCA
CTCAGTGTCTCCTCATGGATGAATGACTGAGAGTGAGGACTGATGTTCCCTTTTGTTTTC
TTTTAGGGCATTCTTCTTGAGCACCGAGAAAAAGAATTTGGAGACAAAGTAAATCCAGTT
TCTGTTCTGGAAGCTGTCAGGAAGATCAAACCACACACTTCAGCCTCAGAGAAAAAA
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