SelenoDB
Release 2.0
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Transcript Report for SPT00002697_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesTetraodon nigroviridis (Tetraodon)
Transcript IDSPT00002697
Transcript release2.0
External IDNone
Gene SPG00002604_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002697_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Tetraodon (Tetraodon nigroviridis) # Full length # Forward
TTGGACCCGTACATGGATGACGACTTCGTCAAGCAGGCCTTTAGTGCTATGGGAGAATCA
CCCACCGGAGTCAAAATCATCACACACAGGATAACCGGGTGGGTGCTGAGCCCAGGACCC
CGTCCACTCCTCCCGCCAGCGCTGCGCTGTAGGCCAACGCTTTTCTGGTTGTCCCCTGCA
GTGGTTCGGCAGGATACTGCTTTGTGGAGCTGGCTGACGAAGCCAGTGTGGAGCGCTGTG
TCCAAAGACTCAACGGAAAACTGGTCCCCGGATCAAACCCGGTTAGTTCCGACGTGACCT
CATTCACTCCTGTCCTAAACAGTCTTTGGAGCCGTCCAAAGCTGGTTTTCCTATACGTTC
ACCTTTCAATATGAACCTCCTGGCTCTCACGTTATAGCAAGTAATTAGCTTGTAGACACC
GGAGGTCAACGCCTCTCGCTTTTCTTTGATCTGACTATAAAGCAGATGAAGTTTAGAAGT
CCTTTTTGGGCTCCTGTTGTGTTGTCATTGCTGGTGGTCAAACTACTGTCATCAGACACG
TTTGACCCAAACCTTTAACAGAGAGACCATCGGTTCCTCTGACGTTACACCCTGTAGTTC
ATTATGGTTACTGTTTCATCTTTATCCTGCTACAAACACCCAAATGTACTGTCAAAGATC
TGCTTTGCTTTAAAATGTTTATGAGACTGAGTGAGCTTTTGGAAGGTGGTTCCGAACCTT
GTTTGTGGCGGTTTGTGAGGATGTCGATTGCGCGGCTGGAGGTGCTGGTGTAAGGAGACA
GCGAACCAGACTGGTGATCCTTCTGGCCTGGTGTGTCCGTGAGCGTTAGCTCCTTGTTGC
TGTGATCTGGCCCCGCTGCCGCCGGCTGACAGGCTGCTCGCTCGCGTATGTACTTTGTTT
GAAGCTGGTGAATAGTCTCTGGTAGGAGCTAACTGAGGAATGGGGCTAAAGGCTAAAGGC
TGTTCTGAGTGGTGGAGGTATGTAAACCCAGTAATGACCACAGTAACGCCACTCTCCATT
TTCAGCAATAATCACTGCTATACTACACTCCTTTGGCGTTTGGGCTCCAATTAATGACAA
TTTTCTTCTTTCTCCCTGCAGCCAAGAAAGTTTAAGCTCAACTATGCTACCTATGGTAAA
CGACCAGAAGCAGGGTAAGATCCTCTCAGTTTCTGCCCCTTTTTGCTGCGCAGAATCGTG
CGCAGATAAACGCCCCCGAAAAGGGACTCCGGGAGAGTGGAGGCTGTTTTTCATGAAAGC
TGTGGTCATTTCAAAGGCTTTGCGTGAGCCGCGTTGTGCTTTTCACAGGCCCGAGTTCTC
TGTGTTTGTGGGCGACTTGGCCTCCGACGTGGACGACTTCCAGCTGCACCAGGTTTTCAA
GAAGTACCCTTCCTGCAAGGGGACCAAAGTGGTCACGGACCAGTACGGGTACTCCAGGTA
GGGCCGCAGCACACACGTGCACCGGGCACACACGCTTTCTGTGTTGAGTACCACATTCTG
GTTGAAGAACGTGCTGTAATCTGCCTATATGTCATGCTTTCTTTTCTGTAATTTCTTTCT
GTAGATAGAACTGCTCTGGACGTCGGCAACCTTGTATTGTCGACAGAAGCTGAACAATTG
TTTTCTTACCATCTTATGCTAAAACTATTGTTTTCCCCATATAGGCTAAGCAAGAGCAAC
TCACAATTCAAGTGATGCTACCTCATGTTAAAAGTAAAACAACAAGTTTCAGTTCTACCA
TAATAATACCCATTATATTTCCTCTTTAAGTGGATGTTAAATGCCAAGTATGGAGCGCTG
AGCGGTGTAGAGAGGGCTTGTAACTGCTGTTTGGCTTGCAGAGGCTACGGCTTTGTCAAG
TTTGGAGAGGAGAGTGAGCAGAAGAAGGCCATCGAGGAGTGCCAGGGGACCGTGCTGAGC
GGAAAGGCCCTCAGGCTCAGCATCGCTGTGGCCAAGAGGTAACCGGCCGCTGAGGACTCC
AGAAACTGCTCTCAGCTCAGCTGTTTCCTCTGTCCTCTGTCTGTGAGGGACAGACGCATC
TGTGTGGAAGCTCCATCAGATGTCCTAGACACACTAGGGCAGGCAAGTTCAGGGAAAAGA
CCCAAACTACAGCCAAAACACCGATACGGAAACTCAAATACTAAAGTACAATGAGCTCAG
ACTGTTACTATAATATGCAGGAAAAATAACAAGTACAGTCTGGATTAATATATCTGCTAG
CTCTGCTCCCAGTCCCATCAGAACCGATGAAGCCTTTTGGATAGAACCCGAAACGTTTTC
GAAGAAAAACAAGTCCGGGTGAAAGTCTCCTAGTAACGAGTACAGTCTAGTAACGAGTAC
AGTCTCCTAGGTAACAAGAACAGTCTCCTAGTAACGAGTACAGTCTCCTAGGTAACGAGT
ACAGTCTCCTAGGTAACGAGTACAGTCTCCTAGTAACGAGTACAGTCTCCTAGGTAACGA
GAACAGTCTCCTAGTAACGAGTACAGTCTCCTAGTAACGAGAACAATCTCCTAGGTAACG
AGAACAGTCTCCAAGTAACGAGAACAGTCTCCTAGGTAACGAGAACAGTCCTCGTGTGTG
AGCATGTGGGAACATCTTTCTTTGTTGCGTTGCAGTCAGAAGATGAGCAGCTCACAGGGG
GGGCCGGGCCAGAACTACAGCAGCTACAACCAGCCCCCCTCCAGCTACTACGGCAGCAAC
AACAGCATGGCTCCGGGGGGCTACTACTCCCAGTGGGGGGGCTACGACCAATACAGCGGC
TACAACTACAACAGCGGCTACAACAGCGGCTACAACAGCGGCTACAACTACAACTACAGC
TACGGATACCCCCCACCCGGACACATGCCCCCCCCGCCCATGGGGGTGCCCCCGCCGTCC
AGCGCCATGTCTGGAGCTGCAGAGGTGAGAGCCAGGAGCCCCACACGGCCGCCGCCCTCA
GGCTCCCACTGGAAAAGCATACTCAGTGACGTCTCCCCCCAGCAGAACCAGGAGGACTCT
GGGCCCGTGGAGGAGGAGGAGGAGGCCGAAGGTCTGAACAGCAGGCACGTGTGTGGAGGT
AGAGGTGTGGAGCGCCGATGTGAAGGTGTAGCCCCGCTGTTTTTCAGAGTCCATCCCCGA
GTGTGACGTGGAGCAGTGGAACAGAGACTTTGTGGAGCGCAGCGAGGAGTTCTACGAGGC
CCTGATGAGCAGCCGCTGGGAGCCTCTGGACTCTGTGGACTCGCCCGTGCCCTCCATGTC
CTGA
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