SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002698_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesTetraodon nigroviridis (Tetraodon)
Transcript IDSPT00002698
Transcript release2.0
External IDNone
Gene SPG00002605_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002698_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Tetraodon (Tetraodon nigroviridis) # Full length # Forward
ATGAGCACGCTGTGGATGGGAAACGTAAGTTAATTGCGGTTTAATGTAACAGAACGGCTA
TGTTTATTAAATGCTAACATTGACGATATACATTTATCAAGTTGTACATTAAGATAAATA
TCTAAAGTCGTGGGTGTATATATAAATCATACTTTAATTCAGTACAAAAATACACAAGTG
GTGAAGCTGGGTTTTCAAATGAATCAGGCGGAAATTAGCTAGCTTTAGCTCGCCGTGCTA
CGCTAGCGGTTTCCCAGAATTCCAACGTAAAGAGGAAATCCAAGCTTTCACGGGCGAAAC
GTTGAGGCTGTCTGCGGTTTTGTGTAGGCTAGCTCGAAGGAACTTTGTCGATCCTACCCG
GTTCTGTGCTTTGTTTCGCCGCCGTTGAACAAATAGATTGTTAGTAATTTAATAGTATTG
TAATAGTTTGATCGACTCCGCCGCTTTGGGAGTTGTTGTGTCGACATCTTTTTGCACCAA
CGCAACCCTATAAAATAATCTCTGAATAATCGTTTTCGACGACTGATGTTATCTTGATAA
TTTAATTGTAGTATTTTAGATACTTTACGTACAGTGCATCCAGAAAGTAAAGTATTCACG
ACGTTTTGCTTTTTCCAGCGCTTTGTCTGATATCTGGACATCTTTGTCACGCAGCTGGAC
TCCTACATGGACGAGAAGTTCATCACGCGGGCCTTTTCCACCATGGGTGAGCAGGCAGTC
AGTGTGCGGATCATACGCAACAAGATGACGGGGTAGGGAGGACTGCTAGCGGCTACGACA
CCATCTTTTCTTCTGACACGAGTGTGCTGCCACCTAGGGGCGCCATGGGTTACTGCTTTG
TAGAGATGAGCGACGAGGCCACAGCTGAAAGGTGTCTTCGAAAAATCAACGGGAAGTCCT
TACCAGGTGCCAGTCCGGTAGGTCTGGGCTTCTTCTCGCAGTGGAAGGGGGCTGCTGCAA
GGGTTACAACTGGTTTTGCTTTTGACAGCCTACGAGATTTAAGTTGAACCGGGCCACCTT
TGGGAAACAAGACGTTGGGTGAGTCCAGATGTGGAGAAAAGAGAAGGTGATCAGAACAGC
TTGTTCCTTCCACTGACCCACCTTCTTCTCCTGTCTCGCCCTGTTCTAGCCAAATGTATT
CTCTGTTTGTGGGAGACCTGACTCCAGAAGTGGATGATGGGATGCTTTATGAGTTCTTCT
ACAATCGCTACCCCTCATGTCGTGGAGGGAAGGTGGTGTTGGACAGCATGGGCAACTCCA
AGTGAGTATCACTACTAGTCACCAGGTGAACGCGCTCTTCAACTTCCATTGTTGTAGCCG
TTTGTTAGCACCAGCTAAGGTAAGGCTGCCCCCGCAGTCAGAGGGCAGGTGGGACGAGGC
CCTGGTCTGAGTCAGCACAGATGTCAGGCTGCTGTCATAGCCAAGAGCCAAAAGCAGGGA
GACACCGGCTGGAGATCACAACAAGCACAGGAAGGAGCAGCAGCAGTGCCATCGGGGTCC
AGGAGAGTTTTGCCCAGGAGGGGTGTGAGGAGAGGGCAACTAAGTGTCTCGAGGTGCTCG
GGGGTCTGGTGACAGTTTTGTTGCCACTAAAACCAAAGTGTTGTTCCCTAGCGTTCAGCG
TGGTACTGAGATGCCGTGTTCAGGCCCAGTCCCAGCTGGGCACGAGCCGGGCAGCAGGGC
CGACTGTCCATCAGTGATTGACAGAACCTCTGGGTGTAGGGGCTGTGGGTTTGTCCAGTT
CCCAGATGAGCGGCTGCAGAAGAGGGCCTTGGACGAGTGTCAGGGTGCTATGGGCCTAGG
AGGCAAAGCTCTGCGGCTTAGCCTGGCAGCCAACAAGTGAGTAGCCTCAACCACAACCTG
CTAACGTGTCTGCAGCCCAGCTTCAGGTGTGTCCTGCCCCCGCAGCTTGAGGAACAGGCC
GCCGCAGCAGGCAGACAGCAGGCCGGCGCAGTCCAGCACAGGCTACAGGAGCGACTACGA
CCAGTACAGCCAGTACCACCAGCAGCAGCAGCAGATGTATCCGGGCTACTACTCCTCCTG
GGGCTACGACCAGGCTGGCTACCCCTACAGCTGTCAGATGTACGACTACAGCCAGTACGC
GGCCGCGCAGGTACGCTGGGTGGCCCAGTCTGCCCTCCCGCCCGCCCGTGTGCGTCTCCA
TCTATCCGTCTGTCCATCTGTGTCCGTCTGCCACCAGGCTGACATCCTCTCACACTCTCT
GTCTTCCCAGGAGGCCGAGGCCGTCCATGACGATGGACTGGAAGGTTGGTGCTGGGGCGG
GGCTTCTGGTAGCTGAGCTGATGAGCAGAGGTTTGAAGGGCTGTTGTTCTGTTGCAGAGC
CCATGGTGGAGCTGAACGTGCTGGAGACCAACCAGACGTTCATGGAGCAGAGTGAGGAAC
TGTACCAGGCCCTGATGGACAGTCACTGGCAGAGCGCAGAGTTCTGTGCAGGACAGGACT
ATTTGACCTCCAGCCTGCCTGAACCCCTCTACTGC
Chart Advanced