SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002871_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesXenopus tropicalis (Xenopus)
Transcript IDSPT00002871
Transcript release2.0
External IDNone
Gene SPG00002779_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002871_2.0 # Transcript # Selenocysteine synthase (SecS) # Xenopus (Xenopus tropicalis) # Full length # Forward
CAGGGTAAGTGTCCCAAAGAGCCATGGGATGAGAGCACAATTGAAATCTTCCTCAATGAA
CTTGCAGTCATGGACAGCAACAATTTTCTTGGCAACTGTGGTGTTGGAGAGAGAGAAGGG
AGAGTTGCCTCTGGAATGGTTTCCCGTCGACATTATCGGTATTCTGCAAACCTTCTTAGC
CTGTGTATAAGGGACCTGTTTCACCAACAATTCCAAATGCTCTTTATAGACTTGTAGATT
ATTTGCAAATGTGTAGCAACTGCAGATACAATATTTCTCAGTAGCAAACTAATTCTTTTA
TAAATCGTATCTGTCCAACTCGCAAAGCAGCCTTGCTCTTTGTGTTTTCATGTATGAAAT
GAATTGTATTCCTTATGAGGGGAAATCATTTAAACTTTAATGGTAGCAAAGCCAAAAGGC
ACTGGGTGTGGTAGCGTTTTGTTGGGCACCCCCATTAGAGTTGCTACCTTCTCACCTGGG
GATGTGACGCCATCTTTTCTGTGGTATCTTATGTCCCTTGCAATGTCACAAGGCCCACCA
GGGACTGCATTAAATGAAAAGTAACACTAAAAATTTTTAAGTAAAAAATCTATTCTACGA
TGCCCCAATAATTGCCCTATCCTGCAAACCATTTATTATTTTGAATGCTTTATTAGAAAA
TACCTGTTAAAACTTGGCTTCCTGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAGCATTC
AAAATAATGAATGGTTTGCAGGATAGGGTAGTTATTGTGCTGGGTAGAATAGATTTTTTA
CTTAAAAATTTTTAGTGTTACTTTTCCTTTTAACATTGTCCTGCCACACAGGGGCCACAG
GAATCACACTTTTGCAGCCTTAGATGAGTCGGTCGTTGCCACGTGAGAGAGACAACCCTT
GGGTTTGTATGCAAATAGCTTGCAGTTGGCGCGTATACACAAAAGAGCAAACATTTTGGA
TATCTGATGGATTTATTTTTCTCATTTTTTACTGGAGCTTACTGAGATGAGTTAAAAATG
TGTGTGAATACCAAAGTGCATTTCTAAGCAGAACTACTATACATTAAGTTAGTGAATAAA
GCTTAAAACTAAAGAAACATAAATACACATGGGCTCATTTAAGAATCCAAGCGCAGCATG
CAAAAAAGGGCCACAGTCCTGTATTAATACAGGACGGGTGAGGGGAGGCACATTGCTCCC
TACCCGCCCATACCTTGCATGTTATTTACACACACAAGGTACAGAGTGCCAGGAGGCTCA
GGGCCCTATCTTTGCTGCTTAACCTAAGGCAGAAGGTAAGTACAGGGCTAGCTACACCTG
CGACAGTTGCACTTGTCACGGAGCAGAGGGCACAAGTACTCCTAGAATGAGCACTAAAGG
CCAAGAATGAAGTCAGTATGCCCAAAGCCCACAATGAAACAGTTGAGTTAATAATAGGGG
CATTGGAGTACATTGGTTTGTGTCTAATGGTCTTTATTTTCTGGCTACGTTTATTACTGA
ATGCAAATTAATGATACTGTTTAAATATTTTTCAGTTATAACTGTTTTGTACAATTACTT
TTAAATAGTATTTTCTTTATCTCCCCGTTCTTAATTCAGGCTGATCCACGGGATTGGACG
GTCAGGAGATATTTCAGCCATCCAGCCAAAGGCTGCGGGCTCGAGTGTTCTAAATAAGCT
CACAAACTCGATGGTGCTGGATATAATAAGATTAGCCGGTATGTAAAGTTGAGACCAAAT
AGAGGCTACAAATATCTGTGGACAGAATGTAGAAAGTAAGTTTTGTAATCGCCTTTTATT
TCAAAATCCTAGGCGTGCGAACAGCAAGCAGTTGTTTTGTTGTACCCATGGCAACTGGGA
TGAGTTTAACCCTTTGCTTCCTTACTCTCCGGCACAAGAGACCAAAGGCAAAATATATAA
TCTGGCCGAGAATAGATCAGAAATCCTGCTTCAAATCTATGATCACGGCAGGTAAGAGTC
ACTGTTTGTTGTCTGCATCATTTGAAATCTTGGCAGGGGAGGAGGGACGATGTTACAAAT
TGTAACAACTTCTCCGCAGTTTACAGACTACATGCAGGAACTACATAACACACAATGCAT
TGTACTGTAATGTTCCTTGCCTTATTTACATCACATATGTAAGGAGTTGTGAGATTGGGA
GGATGCAGGCTGAAGGAAGGCTAAGGACAGTCAATTACTGTTACATTTTATTTGAGTCTC
AAAGTAGTCAGCCAGATCAGCGGATGAACAGGGGGAGGGGCTTAGGGAACTGTTCCAAAC
CATATTTTTAGATCATGAAAAGGCTTCATATTTTTTAATTGATGTATATTGCAAAGTTGC
TTGAAACTATGTTTACTTTTCAAAAAGCTTAAGTTGTGTTTCGGTGGAGTTCCCTTTTAA
TTTAATGCAGCCTTTCTTCATTTAGTATTGAAGGTGTGCTTGGTGTCTCCTGTTCTACAC
AGGGCCAGGATCAAATAGAACCATACTGTATATATGACCGTCCGGTTTGGCACATATTCT
ACTTTTGATATTGCTAATGCTTGTCTCTATAGCTGTGTGTTCTGTGGGTTGTTGTTTAGA
TTGGAAGCTCTTTACAGCAGGGCACCTGTGTTATACTGTACCCCCTTGTTTATTGATTTT
TATTCCTGTTTGTTATCAATTAACATAGAGCAATTCATATCTTGCTGCATCTATATAAGC
TAAAGATGATGACATATCACATTGGACTTTACACCTTGATATAAATGCACTATGTAAAAA
ATAATATATATTTCAACATAAAGGTCTCTCTCTGAAGGTTTCGAACCTGTGGTGATAGAG
AATGTGCTGGAAGGAGATGAACTGCGTACAGACCTTGATGCTGTAGAAGCCAAAATCACA
GAACTTGGAGCAGAAAATATCCTGTGTGTACACTCTACTACTTCCTGCTTTGCTCCCCGG
GTACCCGACAGG
Chart Advanced