SelenoDB
Release 2.0
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Transcript Report for SPT00003187_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003187
Transcript release2.0
External IDNone
Gene SPG00003065_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003187_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Channel catfish (Ictalurus punctatus) # Full length # Forward
ATGGGAGTGCTCAGCGCGGACCTGCGGGTCACCCTGCAGATTCTACCCGGCTTCTTCTCC
AACTGCCTGTTCTTCGTGCTCTACGACTCGGTAGTGCTCGTGAAGCGCGTCGTGTCGCTC
GTGAGCCTCTCGTGCGGCGGCGGCGGCGGCGCGTGGCAGCAGCGCATGTTGACCTCGGCC
GGCGTGCGCTCCATCTGGAACAGCTTTCTGCTGGACGCCTATAAGCAGGTGAGCAAGTGA
GCGTGCATGCACGGCGAAACGCCTGAATTCTACACACTCTATATAGGCTATAAAAGAGCG
CACTTGTTCCAGGAAAGTGTGCCAAAAAAAATAACAACAACAACAAAGTTTCACAAAGCT
GCACATGACATGACACTGACCAAGATCATGCAAGTATTCCAAAATTGTGCTTAACAAAAC
AATTCAGCATCTTGGATTTATCTTTTTAATTAAGCTAATTAAGTGTGCAAAAACTAAAAA
ATTTTTTTCCCCAGTAGATACTCAGTAGTTCAGCATGACGTCATCATCCTGGATTTGAAA
CTGTAAATAAATTGTCTGGATGATCTTTTAGGAGTCAGATTTACAGTAGCAAATATTCCA
GTAGGTGCACCATACTTCATTATGACATGATCCTGCATGAAGGAAGTGTGTTAGACAGTT
TCCATGCATACTGTAAATAACTTCCGGACGATCATTTATAATAACTGAGACAGAGCCAGC
GAATATTCCAGTAGGCACGCAACCATTCGTCACGTCAACAACATCCTGGGTTTATTTTTA
TTTGATATGTTTGGCAAGACAGTTCCGGAATTTCGTTGTATATAGATTGTTGAATTTTTA
TTTATTTATATATATATATATTTTTAAATGCCTGATACTGTACAAAAGTCTTTCAGCACG
TTTTTAAAGCAAAGACGCCTTCAAAAATAATAGAAATAAAAAGTCAATGTTTAATTCTTG
GCCTTGGAAATGCGTCAGTAGTCTCAGAGTGTTTTATACACTAGTTTTATACGGGAAATC
GCATCGGTACGTTTTTTCCAAGAAGAATCTTTCTCAGAGTGTAGATAAGTGTTGAAATGA
CAAATACAATGGGATTCCAACAGTAATGGTATTTTGCGTCTTCTACACTCGGAGAGAGAA
AGGTACCAGACTGTATCTGCTTCGGTGCTGCACCTTTGTACCTTTACATTCTCTGTGTAT
CTGTAGTACGTCATTTAAAGTACATCACTGGATGATGCACGGATAAGATAACACCGCATG
CACCTTTACAGGTAAACGATACACACTAAAGGTGCGAAAGGTGTGCTCCCGATGGTACCG
CTTGTGCTACACTATCTTTATTCCTGAGAGTCTATATAGTCGACTGATACTGTGATAACT
GGATTAACTCATTCAACTCACGTGACCAATAAATACAACTTTAACAATACAACCGATGCA
AGTTTGAGAGCCAATGTTCTAGAAGGTACCACTTCGGCACCGATCTGTACCTTGTTGGTG
TACAGAGTAATGGTACCTTCTAGAACACTGCTTCTCAAACGTGTATCACGTTTATTTAAG
TTGGATTTATTGTCGAGTTCTTACAGTTTAAGGTTTGACTTGGTCACACGAGTTAAAGGA
GTTGAATCCAGTTATCACCAGCTCTAAAATAACGTCACTCGGACCTGACGTTCACGAATT
AAAAGCTCCAATAAGCAGCCAAAACATTATCGCCTTCATTCGTCTTTAATTTCATTTATT
TATTCATTTTCATACGGTTCATTTTCATGCGAATCATTCACGTGATTCATTTACGTATGA
TTCATTTACATGTGATTCATTTTCATGAGATTCATATTCATGAGATTCATATTCAAGTAT
TCGTTTGAATCAATCTGTAACCAAGGGTGGGTGTGGAATTGAGTGGGTTTTTTTTTTTTT
TTTTTTTGGTAATATCTAAACGACGCAAAAAGTTTGAGAACCCCTTTGTATTGTTTACAC
GCTAGTGTAAACGTAGTGTCCGACTCACACACGTCCATAACGGGATGTTAAGAACCACCT
CTGACGCTTAGCTGATGAAAGTCTCAGAGAAAATATACAGCACGTACCCAAGATACCCTC
GATGGGATCACTTCGGTACCTTTTAATTCTAAGCGTCCGTACGTTCGCGTTATAAATGCT
CCAAGGGTCACCGGCAGGCCTGGTTCCTGGTCTCTGATGGAGACCTTGTGGTAATGAGCT
GTGGTTTAATGGAAATTCAGTGGCTGTAATGGACTGCTGTAGGCTGCAGTGACTCTGCCT
TATAAATATCCAGACAGAGCGCGACAATATTGCGATAATCTGTATAATTTTTAGCACGAA
AACAAACATTCCTTGTCGCCGGTGTCGCGTTATCAAAATTTTGTTCCACCTGAGCGACAA
GGAAAGGTACAGTTAAGTACTCTCTATGTTTCGAGAGCGTGCAATAATTCCGAACGACGA
CAATATCCTGGATCGGAAGCACTCTCCGAAATAAAGGCACCAAACTGTTTCAGACTTTTC
CTCATCGCTGGAGTACTGCGATACCGTCAAGGCCACGTCTTTCGTACTTATAGTGTGTAT
TTTTATCCGTCTGAAAATGCTTTAACAGGACCTTAAAGACCTACTGTAGAGTAAGGCAAG
GTGCTCGACGTGCACGTTAAAGGAACGTACAGTCTAATGCCTTTATTCCCAAGAGCGCCT
TAGGGATTTGCGTATTTTATTCATTTCTTTACATTTCAGCTGTTTAGTGTCGGAGGTTGA
GTTGTACTGTGGTTCGTTTGCGCGTCGAGTGTCGAGTCTTTCCACACGTCAGATCGTTTC
CGCTACGCCATATTCGGTAGCCATTTGGTTTGCGTTTGAAGCAGTACGGCGCATAAAAAC
GCGACGCGATCTCTGCTTCTCGGCCAAAGTTAAATCCGTTCAGTAGGAAGGATGACGGAC
TTTGATCTCCAGACAGTCAATGAACTCGCGGGACACGGGACGATGGCCTTTAAATTTGTT
GTAAATGTCTGGGTCTCCGCGAATGTTACTTTTTAACCCGGACCCGGGGAGCGATTGCCT
AACAGACCGTAGTAAGTTGTACCCGTGCCAAAACGAATACTTTGAGCATCCTCCTCATTT
AAAGACTGTCAGGTCGTCACTGCGCCGAATTCCCCGGCCGACGGTGGGAACGGAGCCAGA
CGTCGGTTCGTATTACGTTCTAGATCAGGATTAGTCGCTTTGGTAGTTTGTCATTTCTTC
AGAGATTTCCCTCGCTTCTGACGTCTTCATTAGGGATCTGAATCTGCTTTGTGACAGAGT
TCCATGTTAAATGAAATCGACTTGAACAGGTACTGAGAGTCGTTTGTCGATGGCTGCTAG
TCGCTAGTCGTCACGTGCTCGGCCTCATACTACGGATCTGTAGAGTGAACGTGTGTCCGT
CAAATGCATAGATTTAAACAAGCCTCCCTGTTAGTTTACACCAAAATCGCATTCTAAAGT
ATCTAAATTACGCGACGAAGAAATCCAGCGCTGAACGAAACGAACTCTGTGATTGCAGGT
GAAATTGGGCGAGGCGGCTCCGAACTCTAAAGTGGTGAAGGTTCCCGGGATCTCCGGCTG
CCAGTGGAGCAGCGAGGATGGAAAGACGACGGACGAGTGTCGCCTGTTGGACTTTGAATC
GTCCGATCGGCCCTTGGTGGTCAACTTCGGCTCGGCCAGCTGACCCCCGTTCGTGAACCA
GCTGCCGGTCTTCCGGAGGCTGGTGGAGAACTTCTCGGACGTGGCGGACTTCCTGCTCGT
CTACATCGACGAGGCTCACCCGTCTGACGGATGGGCGGGCCCACCCATGGAACTTTTCCC
GTTCGAGGTGAAGAAACACCGCAGCTTGGAGGAGCGCCTGGTGGCGGCGCAGAGGCTCGT
CGAGCATTTCTCTCTGCCGCCGCAGTGCCGGCTGGCGGCCGACTGCATGGACAACAACGC
CAACATGGCGTACGGCGTCGCCTACGAAAGGGTGTGCATCGTACAGAAGAATAAAATCAC
GTATCTGGGAGGGAAGGGTCCGTTTTATTACAACCTTAAAGATGTACAGAACTGGCTTGA
ACGGAGCTACGGGAAGCGGTAATCTCTGCTGAACGGTGGAATGGTTTATTTTTTTAATAA
AGGACAAGAAAAAAAAAAGAAAAAAAAAAAGATGACGACACTTTTACACCTCTATTGCCT
CCAACGGCGACGTGAACTCTCTGGAAGTCGTCCGGATTCTCTGAAGATCATCGATGATCG
TGGGTGGAATCCAAACATCCCTACCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTATAAA
CAACGACTACAGAGACTAAACCAAGCATTGCACTTCGACTTTTATACTTTGATAGGATGT
CTCTGACAACAAACCTGTGTATGCACTATAAACACCTATAAACACTATCGATATCCAAGT
CATTCGCATTAATAGTAGTATTACGGCGTGTGATTCTTTCACGCTAAATAACACGCATCA
CTTTGCAGAACCAAATTGCCGATCCCAGAAGAAAGCACAAGCTCACATATAGAAGAAATA
TAATTTATTTTTATCGATGTTTATGTTTGTTGTTTTAAATATGTGACATGTTTACCTCCG
GCGGTTTTTTCCCTCCATGTTTGAAGTTGACAATCACTCATATTACTTGCCATTGTAGCC
GTATTATCAGCTTTCGCATGCCCGATTAACGCTTTAGCACATCTGCCCCAGTGGAAAAAA
CCAGTCTGAACCTGGCTAAAACCCAAATATGCTAATTAGTTTGTCCGTTTGTCCATAATG
TTCTACATAGAACCCTTCATCATAGGCGTTTTAGAAAAGGTTCTCTTGCAAATGTTCACA
TAACCTTTGAAGAATCTTTCTATATATATATATATATATATATATATATATATATACACT
GAACCCAATTCCAAAAAAGTTGGGACGCTGTGTAAAATGCAAATCTCATAAACCCATAGG
TTATAGAAAACATATCAAATGTTTAAACTGAGGAAATATACCATTTTAAGAAAAATACTA
AGGTCGTTTTGAATTTGATGGCCGCAACACGTCTCAAAAAAGTTGGGACGGGGCAACAAA
AGGCTGGAAAAGTAAATGTTAATAAAAAGAAACAGCTGGAAGAACAAATAATTAGGCTAC
TTGGCAGCAGGTCAGTAAGATGATTGTGTATAAAGAGAGTATCTTAGAGAGGCGGAGTCT
CTCAGAAGTAAAGAGGGGATGGAATCTGGATGGAAGCAATACAGTATGTTGCTCTAAAAC
CCGTATGTACCTTTCAGCATTGATGGTGCCTTTCCAGATGTGCATGCTGCCCATTCCATA
AGCACTAATGCACCCTCAAACCATCAGAGACGCAGGCTTTTCTACAGGGCGCGGATGATA
AATCCGGACGGTCCGTCTCCTCTTTAGTCCTCTTTAGTTTAGAGGACACGGCGTCCATGG
TTTCCAATTAAAAGAATTAAAAATTTCGATTCGTCTGACCACAGAACAGTTTTCCACTTT
GCCTCAGTCCATTTTAAAGGAGCTTTGGCCGAGAGAAGACGGCGGCGTTTCTGGATCGTG
TTCACATATGGCTTCTTCTTTGCATGATATAACTTTAACCAGCGTTTGTGGTTGACCGTG
TTCACAGACGATGAGTTCTGGAGGTGTTTCTGAACCCACGCAGTGATGTCCATTACAGAA
TCACGCCCGTTTTTAAATGCAGTGCCGCCCGAGGGTCCGAAGATCACGGAGATTTCTCCA
GATTCTCTTAATCTTTTGACGATATTATGTACTGTAGATGATGAGATATTCATAGTCTTT
TAACACGGAGGAACATTATTCTGAAATTGGTTTTTCGCAGATCGGTGAACCTCTCTCCCA
TCTTTACTTCTGAAAGACTCCGCCTCTCTAACATACTCTTTCTATACCCAATCATCATAC
TGACCTGTTCCCAATTAACCTCCAGCTGTTTCTTTTCAATAACACTTACTTTTCCAGCCT
TGTGTTGCCCCCGCCCCGACTTTTTTTTGAGACGTGTTGCGGCCATCAAATGAAAACCTA
CCCCCTCCCCCCCATCGGATTTCGCACAGCGTCCCAACCTTTTTTTGGAAACGGGGTTTG
TATGTGTAAGAGTTTTGAAAGATATTTCTGGAAATGCAGTTTCTATGAAGGCCATAAATA
CACGTATAATGACCTATAAACACGTTCATAAGACTTTATATGTGTTGTAATTGTTCAGGA
AGCTGTATTACACTTTACAGCAATGACTACGATGCGTTATAAGCAGAGCTTGGAACGCGA
AGAAACGGTCGTGGTCAGCTGTGGGCTTGGTTATTCGATCTTTATTACTCTAAGGATTAT
AACAATAACAAAAAAAAGAAATAAATCGATCTCATTTTACTTTCGAGCTCACGATTACAA
CTTATTATAAAGCTCGAGTCCAAATACATCCGTCAACATTTTACACTCAGTAACGATTTA
TAAGTATAGTATTTGCCAATACTAGTACAAAGTAAAATCTATAACCGAATACATTTTTAA
TAGATAAAATAAAGCGTACAGCATAGCGAAGGTTGCTACAAACCGTAATGCGTCTCATAG
ATAATAATAATAACAACAACGTATAATTACTTGGAAATATATCATGTCGTGAATGTATTT
ACGGCCTCCGTCATAGAGAATGTTACATATACGTATATGTTATATTCCGCAAAAGGAAAA
AGAAGAGAAAACTGATTCTATATTTGATTCAAAGCAGGTTTTTCCTCACGGTTTTGCTTA
AACATTGCATTTTGACGGTGATTATTTATGTCCAGACATGCACGCACACATACACACACC
TACACACGCTCATTTGTGTCAAAGACAAACCGGTGTGTGAATGAAGACCACTGACGAAAG
GATCCCGCGTTCCTGTCTGTGGTTGGATGGAACATCACACCTCT
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