SelenoDB
Release 2.0
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Transcript Report for SPT00003209_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003209
Transcript release2.0
External IDNone
Gene SPG00003087_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003209_2.0 # Transcript # Selenoprotein U (SelU) # Channel catfish (Ictalurus punctatus) # Full length # Forward
GTGAACACTGGAGACGCAGAGGAGAAGAGCTTTAAAGCGTTCACACTCTGGGAGAAAACC
GGAGCCGTGATCATGGCCGTCAGAAGACCTGGATGATCTTTGTGCAGAGAGGTGTGTATG
TGTATGTGTGTGTGTGTGTGTGTGTGGTTTTGTATATATTTGTGTTGTGTTGTTACACCG
TACCAGTATGGTGTGATACGGAAACGTGGCGGTCTGTCCCTTTAAGTGACAGATTTCAAA
TGAAAAATCCGTATCCAGCTGGTGTAACTCACACGACTGCATTTAAACTGCCCTTTTAAT
AAACCACTGAAGAGCGAGTTCCTCTAAATATAAATCTGAACTCTTTGTTGTTTCATTGTT
GGGCTAGACGCCAAATGTTTACGCCAAATTTCACACTCATTTCAAACCGCCGTGCACGGA
TACACACAGAACCGCAGAATTTACGTTACAGACCGAAATAAGAGAGGTGCAGTGATGTAT
TTCTACCAGGAGGGGGGGTTCCAAATCCCCCAAAGTTTCACACTGCATCCTTAACTCTTC
GCTGATACCACAGTTTTATTCTTTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCCCTCTGTCTCTCTCTCAGTTCATTTTTTCCATTTCAGAGTACTT
TATTGGCATGATTGTTTACATACAATATTGCCAAAGCACCAGTATAGATAAGAAAGGAGA
ATTAAATAAATACATAAATAAAATAAATAATATAAAAAAAAATTATTCCTTTATTCTTTA
TTTGATTTTCTTTCTGTTTTTATTTTTATTTTGGTTTATTATTTGGTCTAATTAGTTTTT
TCTTTTTTTCTAGCCTTCTTTTTTTCTCTTACTCCATTTTTCCATTCTCTGAATCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTTCTTCCACTCTTTCTCTTCCCTTTT
CTGCCTCTCTCTTTTTCTTCTATTCTTTTCCTCTGTGTTCTTTTCTTCCATTCTTTCTTA
TTCGCTTTCCTTTTTTCTGTTGTATTTTCCTTCTCTCTCCCCCTATTTCTTCCACTCCCC
CCTGCTTTCTCGCCCTTTTCCTGTCACTCTTATTTTTCCATTAATTCTTTCTCTCTGTCC
TTTTTTCTTTCACTATCAATTTTTTTTATTCCATCTTTTTTTCTGTCTGTACCTTTCTTT
CTTTCGTTATGTATTTTATAAATAAAAAATCATCCCATTCCTTTTATTTATCCCTTTATC
AGTTTTTAACTCGTAACCAGCGTAGTATATATTTCAGTTAGTCCAGATTCAGTTCAACTC
TGAAATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTAATAACAGGAAGCCTCTGAGCTGTCCTCTCTGAAGCCTCAGCTGG
ATGAGGTCGGTGTTCCTCTGTACGCGGTGGTGAAAGAGAACATCGGTACAGAGATACAAA
ACTTCAGACCCTACTTCAGCGGAGAAATCTTCCTGGATGAGAAGGTCTGAGATTCCCAAG
TATCACTAAACTTTGCTTTTAATTTCTATCTCATTACGACGGCCACGTTTTGTTCAGAAT
AGCTCAGGCAGAGTGTAGTTGTGGACACATTTCATATTTTACATTTTACATTTATAGTCA
TCTTTTCAACGCACTTGTTCTCCAGAGTAGTTTTTTTTTTTAAATTATTATTCTTTCTGA
AAGCAGGTGCTTATTGTTTTATTACTACATGGGATGAATGTAAATTTTTTGAATGGCAAA
ATCAGTAGTAAATAATTTAGACATTGTGACCACGTGTTTTCATTGTAACAGAAACCTAAA
AGCATTCACCCTACAGTATCATCGGGACATCCTTAATTCAATTCCCGACTACGCCAAAGC
AATCCATGGTCAGGAGTCATGTGAGCAAAACTGGCTGTGCTGTTTAGGTGGGAGGGGCAT
ATATCTCTCCCCTGTCAGTCAAAGTGACACTAGTCAATCACGGGCATTGGTGAGTTCATG
TATGCGGTAGAGGATGGATAGCACTCTCCTCCGCTACCCTGTACAATGCATAGAAACAAA
GACTGAAAACTGCATCTGCTCATCAAATGACTCCTGATTCATTTCGAATGAATCACTTTC
AACAAATTGAATCATGATGCACATTCTGAAGTCTGGTCTATAATCCCCCCTCTGTTTGTT
GTATGCGACAGCAATTATTTTACACTCCCAGGAAGAGGATGATGGTGAAACTGGGCTTCA
CTCGTATCAGCGTGTGGAGGAACATCCTGCGCGCAAATTGGAAAGGTTACCAGGGCAACA
TGAAAGGGGAGGGGTTTATACTTGGAGGCCTTTATGTGATTGGTCCAGAGAATCAGGTGA
TGTTCCACCTTAATCAGATGACATGCTGTAAATCATCCATTTATACGATTTATTAATAGA
ATATCCGTATATTTATTTGCAGGGTATTTTAATGGAGCACCAGGAGAAGGAGTTTGGCGA
TAAAGCTGATCTCAATTCAGTGTTACACGCAGTAATGAAAGTGCAGAAAGCTAACTAAAG
CTATCAGCGCTGATCTCAAGTCAGTTCTACAGAAAATGACGTGTACTACAGAGTAATCGT
CTTTCCTTTGTTTTTAGTTAAATGTGATATACATCACTGTGCAGAAGTATTCCCCCCCTT
CCCCTCCAGTGTACTTAATAGAGAATTTTATGTCATGAAGCAAGACACCATGTTTTTCTC
TTTTTTTTTTTTTTGGCAGGTGTGTGTTTCTGGGCTGTGTGTATTTTCTATACTTACAGA
TAAGCCTTGTACCTGTTTACGCTGTGTTCTTTGTGGGTCTTTCTCTCTTATCCATGTGGT
AAATGCATTGCAGTGTGTCTCTGTTATGATGCTGTAGGGTTTGGGAGCGTATTAATGACA
GACTGACTCTAAACTCTCAACAGGAGCGAGTAGTTTTGATGCCTCGCTCTCCCAAAAC
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