SelenoDB
Release 2.0
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Transcript Report for SPT00003222_2.0
Identity
TranscriptSECIS binding protein 2 (SBP2)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003222
Transcript release2.0
External IDNone
Gene SPG00003100_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003222_2.0 # Transcript # SECIS binding protein 2 (SBP2) # Channel catfish (Ictalurus punctatus) # Full length # Forward
AAGAAGAGCAGGACTCCAGTACAGCTGGATCTGGGGGACATGCTCGCTGCACTGGAGAAA
CAACAACAGGCCATGAAGGCACGACAACTCAACAACACCAAACCCCTTTCATACACAGGT
ATACACACACATACACACACATACATATACTTACACACACACACGCACTCTGTCTCTCAC
ACACACACACACACACACACACACACACACATATACATACACACTCTCTCTCTCTCACAC
ACACACACACATACTCTCACATACACACTCACACACATACACACACAAACAATCTTGCAC
ACATGCACTCAGACACTCATACTCACACACACACACACACACACACACTCATACTCACAC
ACATATACTCACACACACCCACACAGTTTCTATACATATATACCCCTTGTATACAAAGAG
AGACACATCGAGCCATCATCTTCACTACACTTTATGTACAAGAGTACAGTGATGTGTATA
TGTGTATGTGTGTTGGTGTGTGTGTATGTGTGTGTGTGTACAGTGGGTACGACCTCACTG
TTCCACAATAAGGATGCAGTCAGTAAGGGTGTGATGAAATCATATACTACCCCCCACAAC
ATGCTCGACTCCACAGCACCCAAAATCAAGAGGGGTAAAGAGAGAGAGATACCTAAAGTG
AAGAGACCTACTGCCCTCAAGAAGGTACGGTACAGTATGGTACACTACAATACAGTACTC
TGTAGTACCCTACAATACAGTACTCTATAGTACCCTACAATACAGTACTCTATAGTACAC
TACAATACAGTACTCTATAGTACACTACAATACAGTACTCTATAGTACACTATAATACAG
TACTCTGTAGTACCCTACAATACAGTACTCTGTAGTACACTATATACAGTACTCTGTAGT
ACACTATAATACAGTACTCTGTAGTACCCTACAATACAGTACTCTGTAGTACACTACAGT
GCAGTAGAGTACACTATGGTACAGTATACTGTATCACACTATAGGCGCCAATACAAATTT
TACTGCAGCCTTGTTCACTTCCCTTTGGATGTCTGTTGTGTAGTACACTACAGTATAGTC
CAGTACACTACACTATAGTATCTTACCAGAGAGTAGTGTTGTCACGGTACTACAGGTACT
TATGAAATTTTTCTTTTCAGTACCGATACTTTTTACAACTCTACCAGAGAGTACAGTATA
GTACAAAAAAGTACACTACTCAGTAGTTCAGTACACTATACTACAGTACAGATAGAAGGA
CCAGTACTGATTTCACTGGACCCTGGTTCACTTCCCCTAGTGGAACATCGGCTGTGTTCC
ACTTCATCAGCTTGAGTAAAGTTCATTAGATGCATGTTAGACGATCAAGTCTTCAGTGTA
GACATCATGATTAACCCAGAATGCATTTCTGCAGTCTGATGCATGCGTGTGTTCATGCGT
GTGTTCATGCGTGTGTTCATGCGTGTGTTCATGCGTGTGTTCATGTGTGTGTAGGTGATC
CTGAAGGAGCGTGAAGTGAAGGCTAAGCTGTGTGTAAAGGAGCAGGCAGATGACGAGCTT
CACTTCACCGACACACTCACACAGGAGACAGTCTCACAAGAGGGTGTGTATACACACACA
CACACACACACACACACACACTCACACACACACACTCACACTTAACCTGTATTAGTACAT
CATGTTTCAGATTAAAGTATGACAGTTTTCCATTCACACTGACAGCTGATGATGTCACAG
CAGCTGACCAATCAGAAGCTTCTCTTTAAACATAACATACATGCATTTTAAATACACACT
TCCTCTATACATTCTTCTTTTGTTTCTCACTTTTGTTTGTGCATGGAAACTTGAGGTTCA
CGTATTCTACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA
GAGAACGGTCTGAGCATGCCCAGTGATGCCTCACTGTCTCCAGCCAGTCAGAATTCTCCG
TACAGCATCACTCCGGTGTCGCAGGGTTCTCCAGCCAGCTCTGGCATCGGCAGTCCCATG
GCCTCGTCCACCATCACCAAGATTCACAGCAGGAGGTTCAGAGAGTGAGTCAACACACAC
ACACACACACTTACAAAAATGTTTGGTCTGTTGATTGACTTTATTCATTGTACTGATTAT
TGAATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTACTGTAACCAGGTGCT
GAATAAGGAGATTGATGAGAGCGTCACTCTGCTGCTGCAGGAGCTTGTGCGTTTTCAGGA
GCGAGTGTATCAGAAGGAGCCCAATAAAGCTAAAGCTAAGCGCCGCCTGGTCATGGGTTT
GCGTGAGGTCACCAAGCACATGAAGCTCAACAAGATACGATGTGTGATCATCTCGCCTAA
CTGTGAGAAGATCCAGGCCAAGGGTGAGGGGTGTATTGACTTCTAGCACTCAGCTGATTA
GGTTTAAAGCTCTGGAATGTTCCGTACACTCTCTTTCTGAACCACCAGGGGGCAGCAGAC
TGCCTGTTTTATAGCATTCTGTACAACTGAGTTCACTTAGGAGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTATGTGTATAGGTGGTCTGGATGAGGCTCTGTACAATGTGATA
GCGATGGCCCGTGAGCAGGAGATCCCGTTTGTTTTCGCTCTGGGGCGTAAAGCTCTCGGC
CGCTGCGTTAACAAACTCGTCCCCGTCAGTGTAGTGGGAATCTTCAACTACTCCGGAGCA
GAGGTACACACACTTACACACTTACACACACACACACACACACACACACACACACACACA
CACACACTTATACATACACTTATACATACACACTCCTAAGTGAACACACACACACACACA
CACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACA
CACACACGCACACACACACACACCCTTCTTCTATGATTTTCTTTTCATTTTCTTCTTTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCAGGCTCTGTTTAACCGCCTGGTGT
CTCTGACGGAGGAGGCGCGCAGGGCGTATAAGGAGATGGTTTGTGCTCTGGAGCAGGAGC
AGGCTGAGGAG
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