SelenoDB
Release 2.0
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Transcript Report for SPT00003226_2.0
Identity
TranscriptSelenoprotein R (SelR)
SpeciesGekko japonicus (Gecko)
Transcript IDSPT00003226
Transcript release2.0
External IDNone
Gene SPG00003104_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003226_2.0 # Transcript # Selenoprotein R  (SelR) # Gecko (Gekko japonicus) # Full length # Forward
TCTCTGACAAGATATGACGAGTCACACGTTACCACTGACTGGCAAAAGAAACTGACTCCT
GAACAATTCCATGTCACAAGGGAAAAAGGAACTGAATTGGTAAGCCAAAGAGATGTCACA
GTTTTCAAGGCAGTAGGATATGTGTTCTGTACGATATAGAGACAGATCGTATGCCAGATA
ATTACTGAAGAGACATGGGAAGAGAAATGTCAAAAGATTACAAATAAATGGGTGGGATAT
AAGGAATGGGTGGAAAGGGGGAAGCCAATCCAAATATCCAAATACGAATGAAGAATCTGT
GCACATGGTTAAAAATATGAAGATACTATAAGGAGGGAGGGGGGGGTAAAATGATTGTAT
AATGATTTAATGTAAGATTATGTATATAAGCTTTATTATTATTATTATTAATAATAATAA
TAATAATAAAAGAGAGAGAGAGATCGTATGCCGTGTTCCATTCCCTCTCTATTGGGAAGT
ATCTGTTTTAGGGCCAAAATCCAAGCAACTGTGGCAGACCTGCATCATTAAATGTGTGAA
GCTGGGCTTTGGGGAGTATAATTTAATGAAGGATGCTGAACCCTTCCCGCCCAACGTTTC
CCTCTGCAGACTCTCCCAATAGCCGCTTTTCCCCAAAGCTGGGCTCAAGCCTGGTTTACA
CATCTAGCAGAGCTGTGAAATGGTAGAATGGACCACTTTGGACTGCAAGTGGTGGATTCC
ACCTCTGGCCACTCCTTTGCATAACAAAATTCAGTGCAGACAGAAAACACAGCAAGGGGA
GCAGTCCTCCCTTCTCTCTTTGTTTGCTGTGCTTGTTTTCTCTCTGTGTGCGTTTCAACA
TGGAGTGAGGAAGGACACCAAAACATGCACCTCCCAGATCTTCCGGCTGCTGTTGGAAAT
AGAGCTGTCCACTCTACCATCTTGTTGTTGCGTAGGTATGCATCAGGACTATTTCTGATA
TTGCAGCATAGATGGAGAAAATGACCTCTGGAGAGGTGCTGTGATGAAGCTGCCCGCAGT
GGGTGACCTTATTCAGTCATGGCTCCTTTGAGGTCTAAGTCACACCCTGTTTCCACCTCA
AGGGCTTGAACATAATTTCTTAGGGTCTGGAACCAACTTGTCATAGTCTCCATGATCACA
TTTGACACGTACAAGCAAATTAAAAAGTCAGTAATTTATTTGCAAGGCTTATTCCTGGGC
ACAGTCTGCTTCTGAAAAGCTTCCTATTCCCTAAGCAAATACTTTTGTACTGCCTTATAT
TTGCATGATATACGCAGGTTGCAGAAGGCTTTTCCTAGATTTTTAGCCTAGCGTATATGT
AGTCTTTCTCTTAGCCATTTCATATAGTGAACTCGTAATTCTGTGGCTGATGGCAGAAAT
GAGATGCCATATTAGTAATAGACATCCCTTCTGATTTAGTAAAGCAAACCTGGTATGCTG
TTTTCCATTCTCTCAGGAAGACCAAGTCCAACAATACAATTTTCCCCCATATGGTTTTGT
TTTCACTCAACCACGTATTGTAGTAGGGGAGTCTCTCTCACAGGTTTCATAAATCAAATC
AAGTTATCCCCTAAGGAAACAAAGATATAAGTTACTGTATAAAGACTTTGGCATGTCATC
ACCTATTCCTTGAATGTGGGAACCATAATGACTTGCTCAGTGGAGGAAGAAAAAGGTTAC
ACTTTCTCTAGACAGCTGCACAGGATAGATGAGGAGTGGGGAATATTTTTGGTCCCAGGG
CGGCACCTAGGTCTCCACCCACTCTTTGAGGGCTCTGAATTGCCTGCTGGTTCTTCCTGT
ATGCATCGCTCATGGTGCAGGAAACAGGAAGATCAGTCTCTGGCCTCAGTACTTTTCATC
AGGCATACAGCTTGGATCCCTCAAAGGTGGGCAGAGACCCCATTGTCAGTCACAAGCTCT
GGCACAGCTGTTCCTGAAAGAGCAGTTTGTGTCAGAGTGTCTGTTGTGGGGAGGGTGTCT
GTTGTGGGGAGGGTAAGTGAAAGGAGTTTGTAAGCCGCTCTGAGACTCCAAGTGAAGGGC
GGGGTATAAATCCAATATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC
TTCCTCTTTCTTCCTCTTTCTTCCTCTTTCTTCCTCTTTCTTCCTCTTTCTTCCTCTTTC
TTCCTCTTTCTTCCTCTTCCTCTCTTGCTCGGCTGGGCTTAGTGGCACTTGGTCCTTGAG
CCATCTGAGTATTTTTCAGGCATGTGAACCCACTCGCTGGAGCCTTAGTCTTGTGGCCCA
GTGTTCCTGAGAGACTGTTGAGCAGCTTAAGAGTCCAATGAAAAGCTCCTGTGGGCCAGA
TGGGGCCTCCAGGATATGATTTGCTTGTCTCTGATCTAGGTATTCTCCAGATAGGTTGTA
GACTCCTTTTTTGCTCTCATTAATATCAGCAAGGAGGAAGAGACCATGCTTGACTATTAT
GTTAAGCAAATCATCGCCCAAAGCTTTAGTTAGCATGGTAGTAGCCACTGCTATACCTGT
CTTTTATGAACATCGTATCCATTGTAAGCCACTCTATGATGGTAAATTGCATAAATGTGT
GAAGACCTGACCTCCCCGGTACTAACTGCTCCAAGAGGACAGTGGGAAGAAGAACTGAGA
TGAGAAACAGGAGAAAGGAGTTCAAGTCCTGACACAGCAAGTGTAGGAAGGGCCCCTGGC
TCAGCAGCAAAGTGTATGTTTGCATGCCAGGAGCGCTAGACTACATGTGACAATGGTCAT
GGGTCTATCCCATGGCCACCAGTGCCATTTTAGTACCTGCTGTAGTTCTTTAAAAATTGC
TGTGAGGCCCCAATCCAGATTGGCTCTTGTCCACCCCTGCCTTTACAGGTGCAGACCCCC
CTCCCTTCAGTGTCTCAGGACACAGTCCCGAGCATCTCCGGTTTAAACTCGCAGGACTAG
GAAAGATGTCTGGGCAGCTGCCGAGATCTTGGGCAGCTACCGCTGCTCAGAATAAAAGAA
AATACCTGACTGGCCGATTCAGTTAAAGGCAGCTTTGCAAGTTTCCTTTCTGTTCTCTAT
TTTCTATTTTTGTCTGTCCCGGACTTACTGCCAATAATCTTTTAACCAGTTTTTAAACAC
AAACAATACAAAGCAGTATTACGGTGAGAAAGCACCATGCCTGACCCCATAGTTCAGAAG
GCGTATAAGGTGGGAGTGGAACACAGCCGCAGGGTGCCATGTAGAGCTGGCAGCTTGAAT
GCACGCCCACCCAGCTGCCACAGAAATCCTGGCTGAAGCTCAGCATTGCAAGGTAACTTT
GAAGAGGTGACTGGCTTTTGGATTAGAACCTTAATGTACATGTTTGAAGCCTTTTAGTGG
GATGTATCTGTCTAACACGGAGCCTGGGATGTACCACTGCGTCTGTTGCGATGCTCCACT
GTTCAGGTAGGCGCTCAACTATAATCCATTGTATTTTTTATGTATCCCTCTTGTCTCTTC
CGGAGCTTAGGAGCATGGCAGTTCTCCTCATGTTACTCTCACAACAACCCACTGAGGTAG
GCTAATCTGAGAGTGAGAGAGTGCTGGGTCAAAGTCGGCTAGTGAGGGCCGGGGCCAAGG
AGAGTCCAGGTGAAATTCTCTGTCCTTTGCGCAGCAGTGATTGGACTCGGAGGTCGGGAA
CAAAGCTTGGTCCAGTTGTGACTGAGGGCATCGTGGGGAGTGTGTGCCCCCTGCCACCCC
TTCCTTCCTACACATGGAACCTCAAGAATTAAGATTTTTGGTATGGAGTGAGCTGCAGTT
GGTGGTGATGCCCAACCAGGTGAAACAACAAACTTGGGGCTTGTTCTGTTGCCTGGAGAA
CAGGACCCCAAATCGCATCCTGGTCTGTAGGCAAGAGAACAAACTACAACTTTTGTTTTT
CTTCCCCGGCTTGGGGACATCATAACACATTGTCTTTGGCTGAAGCCAGGAGGCTTGGAT
TCTTTGGGCTGTGCACACGGTGAGGGAGGAGGGAGCCCCTGAGCCCTTCCTGGCGCGCAG
TGCTGTCCCAAGAGCCCTGTCCTGGGAGTGGGCCCCCATTGACCAGACCTGAGTAGGGTT
CTGAGTAGACCTGCTTGGGATCCCTCTCTCGTTCTCATCACGGAAAAGCCACAAACTGCT
TATGACCGATGAATGCATCCAGCGGCAGTCTCCATCACACCGCTAGACGTGATGGAAGAG
AAAGATACTCTGAAAAGCAGAATGGAAAGACTTTTGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTTATGACACCCAGGGAAGTGATTTCCTT
TCCAAGAAGGTAAAACTTGTATATGAGAACCAGATTTTAAAAAATAGAAACCTGCTGTTC
AGGCCTATATTATTGAAGCATTCCTTCCAGTGTTTGACAGAGAAATGGGTACAAGTTTCT
TCTGCGTGATCATTTCAAGCTGATGACCCTTTTCCAGGAGAAGAGAGATCAGTCTGCTGT
CATGCCCCCAGTAAGTGTTTGCTCTGAAGCTGATCCAGAAACTTCAATCAGTGTAGATGT
CTGCCTTTGGACAGGCATGGGCAACTCAATCAGTTCTTGCCCATCTGCATCTTATGAGTT
TCTGGATCTGCTTCAAGATGTTTGGCATGGCATGTCATCCACTGCAGGTAGGAAAATGGC
CCTTAGACCCAACTTTCACAGTCAAATTGAATAATGCCAGTCGTTCTTCATGTTTACTGC
TGAGCAGTATGCAAAACTGTTTGTTAGAAATGTCCCAATATCTTTCCCATGCAAACTGCA
ACTCTGTACTTACAAGTGTCCAGAGAACATACTGTTCTCTGCTAGAAAATACTCACAGAG
GATTAGAACTACATGCAATGTGAGCTTCCACTATTCTAGATAACAAATTACAGGACTTTA
AATGGAACGTTAAACCTCGGTCCAGTCATAAAATGACAACCAAGAGTTGTACTTCTTCAA
ATTATCTTTGACTTGATTCAGGACAGTTAAAATGGAGATCAAAGCACATGACATATGCTG
AAGGTATGGCGTATTGAAGGCTAATCTGAAGCACATGTTCAGGGAATGCCCACTTATCCA
TAAATGCTCTGGTGAAATACTTCAAAGGACAAATAGAATTTTGAATAGTGATCTTCTTGC
AGTTCCTGAAAGGTTTCTAGCAGAAAATCTAAGCCATCTACCTATTAATAAACCGCGCAG
AGACAGTTGTGGTTGAAAGCTATTTTAATAGGCCGCAACATTGGCAAGGGGTTTCTCCAG
TAAGTAAACACGGATGTGGAAAGATTCAGGGAACCTGAAATGCATAGTGTTGGTTCTCAG
CCTCAACAGAAATCACATTGGTCTCTCAGCCCAGAGAACTTCTTGTGCCGTGGTGGGTTG
CCCCCACTGATTTGCGTGAGGATTCTGTGGTACTTACCCACCAAAGACAGAATCAGTGCT
GTTAATTCTGGCAATGTACGAGGAGAAGACTTGGTCCAGTCACTAACAGTTGATCAATAC
AGACTGTTCTGGTTGTGTTTTCAGTGGAGTATGAATGGGGTGTGCACTTGTTATTGTACA
AACAACTTCTGGCTCTGCAGGCGAGGTCATATAGAGCCAGTGTTGTATAACAGAGTGTTA
GGTTAGGATCTGGGAGATCCAGGTTCAGATCCCCACTCTGCTGTGGAAACTTGTTGCATG
ATCTTGGTCCAGTCATTCTCTCTCAGCCTAATCTACCTCGCAGGGTTGCTGTGAGAATAA
AAACGATGTTCACTGCCCTGAGCTGTTTAGAAGAAGGGTGGGATAAACGTGTACTAAGTT
AAGATCAGTTTGACATAATGTCAGGCTGGGACACCTGGATTCCAGTCCCCCCTCAGCCAA
AAATCTCCCTGCTGACCTTGGGCCACTCAGTGAGGGTTTTCCAGCCTCCCTGGCCTCACG
CAGGGTTTTTACAGGGACATGCCCAGCAGCCCGAACTGTTTGGACAGTGTAAAAAATATA
GTTGATAGATGGGTAGCCATGGCCCCCTTTCCTTCCTGTTCCTCTGTCAGACGCAGCAGC
TGCTCTGCTTGTGCCATTCAAAGCTTGTGTGGGGAGATGTGCTTTTTAAGTCTGTAATTT
GTGGTTGTCAGCATGTCCATCCACCACTAGGTGGCGCTAGAGAATAGAGATTGGGGAGGG
TGCGACTGCGAAACTTTGGGCAGGAGATGAAAAAGCAGCCATCTTCCGTTTGTCTTCAGC
GACATTTAGTCAAGCTTTGATCTCTAGAACAGTTCCAAATAGTCTTATTTTCAGCTTCTA
TTGTACTGGAAAAGCTAAGTTTAATTAAAGTGTGAATACTCCTTTGTTCTTAGCTTCTGG
TCAGCAAGGGTTGGTTGTGAGGATAAAATGGTAGGATGGGGGGATAATGTCTGCCACTCT
GGGACCCCACTGGGGAGGAAGGCATAAATACAAATGGGGAAGAAATTCTCTGACCTACGA
TGGCCCAGGCTAGCTAGCTTTTATCAGGTCTGGGAAGCGAAGCAGGGTCAGTTCTGGTTA
GTACTTGGCTGGGAGACCGCCAAGGAAGTCCCAGGTCGTTAGGCAGAGGCAGGCCATGGC
AAACCACCTCTGAATGTTTCGTGCCTTGAAAACCCCACGGGGTCACCATAAGTCAGTCAA
TGGGCAGCTCTGACTATAACCCTGTTGGGCCAGAACAACTGGATTTAGCCCTTTTCCCAA
CCCTACATGCATCGTGGAAATAACCCCCACTGGGTTAGTCAGATTTCCTTTTATGCAAGG
TTTTTAGTATTGCATATTTGAGCACAAAAATTATCCTCCAGTTAGGAGGATAAATATCAG
GAGTCCAGTGGGAAAGACCCCTGGGGAAGGGAATAATTACGCAATGTAGTTAGGAGTAAT
AATGGTCCTTGTTAACATTATGGAACATGTTTATATACAACAAAGTAGAGCCAGTAATAT
TCGGTTTTGTCATTCTTAATAGCTCAGAGAAGAAGTATGATTCTGGCACCGGATGGCCTT
CCTTTTCAGAAGCACATGGGACGTGTGGGACCGATGAAAGCAACACTTCTATCCTGAGGC
GGCCTGATAACTCACTAGGATCAACTGGCACAGAAGTCCTTTGCAAACAGGTACATTTCA
CTCATCACATTTATATTCCACCCTGCCTCCAAGGAGCTTAGGGTGGTGTATGTGGAAGCG
GTTCTCCCATTCTTTCCCCTCTCAAAATTCTGCGAGGTCACTTAGACTGACCCCCCAAGT
AGGTTGTGTGGCCCCCACAGGGATCCAAACCCCATGTTGAACTTCAGTATGCTATCGGTG
ATGGACAGGAGGCTGTCCTGCCCCTGAAGGGTAAAACAGCCCACCAGCTGAGCCTATGGG
AGTGCTGCTCCATCATCCAATCACCTTTCCGAGGGGGGGGGGGGACGGAATGTTGGAGGG
AAGCGCAGCAGGAGTCAGTTCAGGTCTGCCTCAAGGATAGCGCAGTCGTGGTTTGGATCT
GCCTCAGGAAAAGAACAGGAGGATTGAAGGGTAACTCTGCCAGGCAGTGTGGCTGAGTGG
TGGGTAGAGTACCCAGTTGTGAGGATTGTCTTGGGAGATGAGCAGACCCAGTCCTGTTTA
GTTTGACTCTTGGGAAAAGGGCAGGCCGGTGTGGGTAGAATCCTGTTTGTGCGGCATCTG
TGTGTGTATGTGTGTGCGTGTAAGAATACAACCTGGTGGCTAAGCAGTAAAAGCCTGGTT
GTAACCACAAGCATTAAAGGGAATTCAAATCACAATCTGAAGCCATAACTAACTTAAGTT
CCTCAGTCAGCCTTCTCCTGTGACTGCTGGAGATCTGTGCTGCTGAACTGTACTTTTGAA
ACAACGTGCACATAAATAAATCTTCTTTGTTATTTCCGTACAACTGCCTCAGTGATCTCC
ATGTTCTTCTCACCACAAAACTAACCTCATGGCAGCAAACCCAAAGCCTGTATACCTGCT
ACACCAACTGTAACTTGTAACTGAGGGGAACAACTGGGGGGGGAAGTTTTATTTTAATGG
TTCTCCCAAATTTTAAGAGGCTGTGTGGATCCGCTTGGGTAATGTATAGGAGTCTTGTTA
CACTCTTATTCTTCATGGCATATTTGCATGGAAGGAAGCAAAAAATGTCATCAGTAAATG
TGGCATTCTTTCGTCTTATCATTGTCTGATACAAAAGTGTGTGTGTGTGTGGGGGAACAC
ATTCATTTGTTTAATTGCATGAATCCATCTAAAGACGCCACCCAGAGCTCCTTGGAGGAA
AGAAGGGCTAAAAATGCAATAAAGAAAGATACTTCCACTTATCATGTAATTGGTCCCAGG
TGAACCATATGTAGGAACTTCTGGGACCAATCTTGTACTGTGTAAAATTTTCAAAAAATT
AAACGTGATGAATGGCTGGGAAAGTTGACATAAAAAAAAAAAGATGGGAAATGTAACTAT
CTCCCCATTGGTTGACACAGATACTCCAGGCATCAGCACTGATTTCCGTCTTGCGGAAAT
GCGATTAATAAAATAGCGGGACACAGATTGAAAACAGGAGGACATTCTTTCCCATCTCTG
CTTCGTTTATGTTTTGAGCTGGTTCAAAGTGGGATTTTCTCTACAACTACTTTTGACAGA
GGAAGCCCCCTCATTGGAGCTGAGGGCTGGGTTCTCTCCCCCCCCCCAAACAAGTTTATC
CAGGAGAAATTACACAGATTATCTGGTTTATCCGGATGTACCCAAAGCATACAGTCTAAA
GGGGGCAAAAACTGGTATTAAATATGGGAAGTCGTGATTATATGGCAGTTGCAGAGGTAA
TGGGCCCCTTTAGTGATGGAATCGATCCCCGTTTGATTTATGCAGATGTGCTTCTGTTAG
ATCAAGTCTGCTTTTCTCTTGCAGTGCGATGCCCACCTGGGCCACGTGTTCAGTGACGGT
CCTGAGCCATCTGGGCAGAGGTTCTGCATCAACAGCGTTTCATTAACATTTAAGCCAAGC
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